Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024964 Carpinus fangiana HOM05D001072 ORTHO05D006807 0.0e+00 3174.4 1635 100.0
Zm00001eb093280 Zea mays HOM05D001072 ORTHO05D006807 2.0e-32 146.4 237 33.8
Os01g0977600 Oryza sativa ssp. japonica HOM05D001072 ORTHO05D006807 1.8e-30 139.8 209 33.0
FAN16G0450 Fragaria x ananassa HOM05D001072 ORTHO05D006807 5.4e-30 138.3 200 34.5
Atru.chr1.2576 Acer truncatum HOM05D001072 ORTHO05D006807 7.0e-30 137.9 209 33.5
Lj2A1095G44 Lonicera japonica HOM05D001072 ORTHO05D006807 9.2e-30 137.5 373 25.2
RcHm_v2.0_Chr5g0071961 Rosa chinensis HOM05D001072 ORTHO05D006807 9.2e-30 137.5 209 33.5
FvH4_3g39950 Fragaria vesca HOM05D001072 ORTHO05D006807 1.2e-29 137.1 200 34.0
FAN11G0037 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.2e-29 137.1 200 34.0
FAN21G1089 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.2e-29 137.1 200 34.0
Ciclev10000015m.g Citrus clementina HOM05D001072 ORTHO05D006807 1.6e-29 136.7 209 34.4
arahy.Tifrunner.gnm1.ann1.QD7CJP Arachis hypogaea HOM05D001072 ORTHO05D006807 3.5e-29 135.6 209 33.5
arahy.Tifrunner.gnm1.ann1.XX59BG Arachis hypogaea HOM05D001072 ORTHO05D006807 3.5e-29 135.6 209 33.5
Dinv09685 Davidia involucrata HOM05D001072 ORTHO05D006807 3.5e-29 135.6 209 32.5
Dinv12245 Davidia involucrata HOM05D001072 ORTHO05D006807 3.5e-29 135.6 209 32.5
MCO05G029 Micromonas commoda HOM05D001072 ORTHO05D006807 3.5e-29 135.6 208 33.2
EL10Ac8g18974 Beta vulgaris HOM05D001072 ORTHO05D006807 4.6e-29 135.2 209 33.5
AUR62025311 Chenopodium quinoa HOM05D001072 ORTHO05D006807 4.6e-29 135.2 209 32.5
AUR62028316 Chenopodium quinoa HOM05D001072 ORTHO05D006807 4.6e-29 135.2 209 32.5
FAN25G0381 Fragaria x ananassa HOM05D001072 ORTHO05D006807 4.6e-29 135.2 200 33.5
LjContig00141g0020287 Lotus japonicus HOM05D001072 ORTHO05D006807 4.6e-29 135.2 205 33.7
HPP92_012011 Vanilla planifolia HOM05D001072 ORTHO05D006807 4.6e-29 135.2 215 32.1
HanXRQChr10g0312111 Helianthus annuus HOM05D001072 ORTHO05D006807 5.9e-29 134.8 205 33.2
MBI03_g13043_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 5.9e-29 134.8 215 32.1
MD03G1058100 Malus domestica HOM05D001072 ORTHO05D006807 5.9e-29 134.8 205 33.2
Thecc.09G359500 Theobroma cacao HOM05D001072 ORTHO05D006807 5.9e-29 134.8 209 33.0
Mapoly0076s0060 Marchantia polymorpha HOM05D001072 ORTHO05D006807 7.8e-29 134.4 211 31.3
Sabra19G0124000 Salix brachista HOM05D001072 ORTHO05D006807 7.8e-29 134.4 214 33.2
Sabra19G0130600 Salix brachista HOM05D001072 ORTHO05D006807 7.8e-29 134.4 214 33.2
THA.LOC104810689 Tarenaya hassleriana HOM05D001072 ORTHO05D006807 7.8e-29 134.4 215 32.1
Migut.D00839 Erythranthe guttata HOM05D001072 ORTHO05D006807 1.0e-28 134.0 209 31.6
Cpa.g.sc2.338 Carica papaya HOM05D001072 ORTHO05D006807 1.3e-28 133.7 209 31.6
COL.COLO4_11172 Corchorus olitorius HOM05D001072 ORTHO05D006807 1.3e-28 133.7 205 32.7
Gohir.A03G024800 Gossypium hirsutum HOM05D001072 ORTHO05D006807 1.3e-28 133.7 416 26.7
Medtr5g074510 Medicago truncatula HOM05D001072 ORTHO05D006807 1.3e-28 133.7 215 32.6
Duzib168G2177 Durio zibethinus HOM05D001072 ORTHO05D006807 1.7e-28 133.3 209 32.1
Glyma.02G232900 Glycine max HOM05D001072 ORTHO05D006807 1.7e-28 133.3 209 33.0
Lalb_Chr04g0251881 Lupinus albus HOM05D001072 ORTHO05D006807 1.7e-28 133.3 205 32.7
QL01p025823 Quercus lobata HOM05D001072 ORTHO05D006807 1.7e-28 133.3 209 32.1
QL04p095953 Quercus lobata HOM05D001072 ORTHO05D006807 1.7e-28 133.3 209 32.1
TAR623G0321 Trochodendron aralioides HOM05D001072 ORTHO05D006807 1.7e-28 133.3 215 30.7
TAR623G1063 Trochodendron aralioides HOM05D001072 ORTHO05D006807 1.7e-28 133.3 215 30.7
Potri.019G126000 Populus trichocarpa HOM05D001072 ORTHO05D006807 2.3e-28 132.9 214 33.2
PRCOL_00002801 Prasinoderma coloniale HOM05D001072 ORTHO05D006807 2.3e-28 132.9 213 32.9
Prupe.6G045900 Prunus persica HOM05D001072 ORTHO05D006807 2.3e-28 132.9 205 32.2
MSTRG.21246 Avicennia marina HOM05D001072 ORTHO05D006807 3.0e-28 132.5 209 32.1
CiPaw.13G067600 Carya illinoinensis HOM05D001072 ORTHO05D006807 3.0e-28 132.5 205 32.2
MELO3C020494.2 Cucumis melo HOM05D001072 ORTHO05D006807 3.9e-28 132.1 205 32.7
SGA_v2.0_scaffold20G09297 Striga asiatica HOM05D001072 ORTHO05D006807 5.0e-28 131.7 239 31.0
Cre06.g252100 Chlamydomonas reinhardtii HOM05D001072 ORTHO05D006807 6.6e-28 131.3 205 36.6
Ca_05680_v3 Cicer arietinum L. HOM05D001072 ORTHO05D006807 6.6e-28 131.3 209 33.0
ClCG03G000170 Citrullus lanatus HOM05D001072 ORTHO05D006807 6.6e-28 131.3 205 32.2
CsaV3_1G036730 Cucumis sativus L. HOM05D001072 ORTHO05D006807 6.6e-28 131.3 205 32.2
Gohir.D03G143700 Gossypium hirsutum HOM05D001072 ORTHO05D006807 6.6e-28 131.3 205 32.7
Gorai.003G151000 Gossypium raimondii HOM05D001072 ORTHO05D006807 6.6e-28 131.3 205 32.7
Actinidia32600 Actinidia chinensis HOM05D001072 ORTHO05D006807 1.1e-27 130.6 209 32.1
TPR.G25340 Trifolium pratense HOM05D001072 ORTHO05D006807 1.1e-27 130.6 209 33.0
Manes.18G136800 Manihot esculenta HOM05D001072 ORTHO05D006807 1.5e-27 130.2 214 31.8
Phvul.008G250900 Phaseolus vulgaris HOM05D001072 ORTHO05D006807 1.9e-27 129.8 209 32.5
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 2.5e-27 129.4 209 31.1
CSS0035690 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 2.5e-27 129.4 209 31.1
PSO017G5353 Papaver somniferum HOM05D001072 ORTHO05D006807 2.5e-27 129.4 215 30.7
Sopen09g017350 Solanum pennellii HOM05D001072 ORTHO05D006807 2.5e-27 129.4 209 31.6
PGSC0003DMG402017675 Solanum tuberosum HOM05D001072 ORTHO05D006807 2.5e-27 129.4 209 31.6
VMungo0647G0153 Vigna mungo HOM05D001072 ORTHO05D006807 2.5e-27 129.4 209 32.5
ATR0681G329 Amborella trichopoda HOM05D001072 ORTHO05D006807 3.3e-27 129.0 214 30.8
Sed0011357 Sechium edule HOM05D001072 ORTHO05D006807 3.3e-27 129.0 205 32.2
Psat2g054080 Pisum sativum HOM05D001072 ORTHO05D006807 5.6e-27 128.3 215 31.2
vmacro02906 Vaccinium macrocarpon HOM05D001072 ORTHO05D006807 5.6e-27 128.3 209 31.6
CDE04G3416 Ceratophyllum demersum HOM05D001072 ORTHO05D006807 9.5e-27 127.5 209 30.6
Lsat_1_v5_gn_8_108741 Lactuca sativa HOM05D001072 ORTHO05D006807 9.5e-27 127.5 205 32.2
CANSAT54G0981 Cannabis sativa HOM05D001072 ORTHO05D006807 1.2e-26 127.1 209 30.6
Nitab4.5_0000684g0150 Nicotiana tabacum HOM05D001072 ORTHO05D006807 1.2e-26 127.1 209 31.6
PSO170G6524 Papaver somniferum HOM05D001072 ORTHO05D006807 1.2e-26 127.1 215 30.2
Aqoxy4G02167 Aquilegia oxysepala HOM05D001072 ORTHO05D006807 1.6e-26 126.7 209 30.6
DCAR_018643 Daucus carota HOM05D001072 ORTHO05D006807 1.6e-26 126.7 205 32.2
Pp3c11_1040 Physcomitrium patens HOM05D001072 ORTHO05D006807 2.1e-26 126.3 209 31.1
Haze_24430 Corylus avellana HOM05D001072 ORTHO05D006807 2.8e-26 125.9 209 31.1
Rhsim13G0062700 Rhododendron simsii HOM05D001072 ORTHO05D006807 2.8e-26 125.9 209 31.1
AT5G58410 Arabidopsis thaliana HOM05D001072 ORTHO05D006807 4.7e-26 125.2 207 30.4
Cc01_g15000 Coffea canephora HOM05D001072 ORTHO05D006807 6.2e-26 124.8 209 31.1
Sc06g0008120 Simmondsia chinensis HOM05D001072 ORTHO05D006807 6.2e-26 124.8 220 30.5
Aa31LG11G200 Aethionema arabicum HOM05D001072 ORTHO05D006807 1.0e-25 124.0 412 25.5
Nitab4.5_0000046g0010 Nicotiana tabacum HOM05D001072 ORTHO05D006807 1.4e-25 123.6 394 26.4
SMO367G0609 Selaginella moellendorffii HOM05D001072 ORTHO05D006807 1.4e-25 123.6 205 29.3
BolC9t57885H Brassica oleracea HOM05D001072 ORTHO05D006807 1.8e-25 123.2 551 21.6
Eucgr.J01850 Eucalyptus grandis HOM05D001072 ORTHO05D006807 1.8e-25 123.2 209 30.6
AL8G34570 Arabidopsis lyrata HOM05D001072 ORTHO05D006807 3.1e-25 122.5 207 29.5
AagrBONN_evm.TU.Sc2ySwM_344.918 Anthoceros agrestis HOM05D001072 ORTHO05D006807 8.9e-25 120.9 237 29.1
Sp6g20090 Schrenkiella parvula HOM05D001072 ORTHO05D006807 1.5e-24 120.2 207 29.5
unitig_0.g201 Utricularia gibba HOM05D001072 ORTHO05D006807 1.5e-24 120.2 205 27.8
PGR119G0697 Punica granatum HOM05D001072 ORTHO05D006807 2.0e-24 119.8 209 29.2
Carub.0008s1900 Capsella rubella HOM05D001072 ORTHO05D006807 2.6e-24 119.4 207 29.0
Thhalv10012416m.g Eutrema salsugineum HOM05D001072 ORTHO05D006807 4.4e-24 118.6 207 28.5
TWI31G1315 Tripterygium wilfordii HOM05D001072 ORTHO05D006807 5.8e-24 118.2 209 28.2
CARHR272240 Cardamine hirsuta HOM05D001072 ORTHO05D006807 1.4e-22 113.6 419 25.1
BolC3t13881H Brassica oleracea HOM05D001072 ORTHO05D006807 3.2e-22 112.5 214 28.0
Peaxi162Scf00055g00202 Petunia axillaris HOM05D001072 ORTHO05D006807 4.1e-22 112.1 194 29.9
Nn2g11057 Nelumbo nucifera HOM05D001072 ORTHO05D006807 1.5e-19 103.6 217 29.5
Oeu050029.1 Olea europaea HOM05D001072 ORTHO05D006807 9.5e-19 100.9 209 27.3
BcaB08g36177 Brassica carinata HOM05D001072 ORTHO05D006807 8.6e-12 77.8 392 23.2
SEGI_04376 Sequoiadendron giganteum HOM05D001072 ORTHO05D006807 5.6e-11 75.1 237 31.6
Oeu050026.1 Olea europaea HOM05D001072 ORTHO05D006807 4.7e-10 72.0 91 37.4
Peaxi162Scf00236g00023 Petunia axillaris HOM05D000086 ORTHO05D000431 2.4e-06 59.7 92 34.8
CBR_g30901 Chara braunii HOM05D001072 ORTHO05D006807 3.2e-06 59.3 100 38.0


User provided reference genes

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