Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024879 Carpinus fangiana HOM05D005149 ORTHO05D006251 0.0e+00 1193.3 608 100.0
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 4.6e-27 127.1 252 31.7
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 6.0e-27 126.7 256 34.0
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 6.0e-27 126.7 320 33.4
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 1.0e-26 125.9 257 33.5
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 1.0e-26 125.9 250 31.6
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 1.0e-26 125.9 339 28.0
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 1.8e-26 125.2 304 30.3
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 1.8e-26 125.2 256 33.2
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 2.3e-26 124.8 256 31.6
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 6.7e-26 123.2 302 29.5
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 8.7e-26 122.9 329 29.2
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 8.7e-26 122.9 259 31.7
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 8.7e-26 122.9 264 32.6
GSVIVG01010707001 Vitis vinifera HOM05D005149 ORTHO05D006251 8.7e-26 122.9 250 32.8
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 1.1e-25 122.5 265 33.2
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 1.1e-25 122.5 280 32.1
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 1.5e-25 122.1 254 31.5
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 1.9e-25 121.7 252 31.3
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 1.9e-25 121.7 256 33.2
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 1.9e-25 121.7 262 30.9
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 1.9e-25 121.7 297 31.3
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 1.9e-25 121.7 262 33.2
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 1.9e-25 121.7 258 32.9
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 1.9e-25 121.7 258 32.9
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 2.5e-25 121.3 256 32.0
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 2.5e-25 121.3 255 31.8
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 3.3e-25 120.9 256 31.6
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.3e-25 120.9 273 31.5
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.3e-25 120.9 273 31.5
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.3e-25 120.9 273 31.5
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 3.3e-25 120.9 251 31.5
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 3.3e-25 120.9 257 32.7
TPR.G35740 Trifolium pratense HOM05D005149 ORTHO05D006251 3.3e-25 120.9 259 30.9
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 4.3e-25 120.6 250 31.6
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 4.3e-25 120.6 256 32.8
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 4.3e-25 120.6 273 31.5
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 4.3e-25 120.6 256 30.9
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 4.3e-25 120.6 256 32.8
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 5.6e-25 120.2 256 32.8
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 5.6e-25 120.2 273 31.9
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 7.4e-25 119.8 256 32.8
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 7.4e-25 119.8 323 31.6
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 7.4e-25 119.8 250 30.0
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 7.4e-25 119.8 254 30.3
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 7.4e-25 119.8 259 31.3
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 9.6e-25 119.4 256 32.8
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 9.6e-25 119.4 256 32.8
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 9.6e-25 119.4 258 31.8
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 9.6e-25 119.4 256 31.2
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 9.6e-25 119.4 262 31.7
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 9.6e-25 119.4 257 32.3
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 9.6e-25 119.4 330 28.2
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 1.3e-24 119.0 254 30.7
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 1.6e-24 118.6 256 30.1
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 1.6e-24 118.6 260 31.5
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 2.1e-24 118.2 254 31.5
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 2.1e-24 118.2 305 28.5
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 2.1e-24 118.2 258 31.4
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 2.1e-24 118.2 260 31.2
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 2.8e-24 117.9 256 30.9
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 2.8e-24 117.9 258 30.2
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 2.8e-24 117.9 252 30.6
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 3.7e-24 117.5 273 31.1
MCO16G624 Micromonas commoda HOM05D005149 ORTHO05D006251 3.7e-24 117.5 261 33.0
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 4.8e-24 117.1 255 32.5
Zm00001eb369140 Zea mays HOM05D005149 ORTHO05D006251 4.8e-24 117.1 306 29.1
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 6.2e-24 116.7 256 31.2
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 6.2e-24 116.7 313 29.7
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 6.2e-24 116.7 301 29.9
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 8.1e-24 116.3 256 32.4
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 8.1e-24 116.3 256 32.4
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 8.1e-24 116.3 256 32.4
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.1e-23 115.9 258 31.0
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.1e-23 115.9 256 30.9
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 1.1e-23 115.9 256 31.2
GSVIVG01027217001 Vitis vinifera HOM05D005149 ORTHO05D006251 1.1e-23 115.9 232 34.9
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 1.4e-23 115.5 259 31.7
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 2.4e-23 114.8 300 29.7
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 4.0e-23 114.0 271 30.3
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 9.0e-23 112.8 372 28.5
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 1.2e-22 112.5 256 32.0
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.2e-22 112.5 258 30.6
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 1.5e-22 112.1 293 28.3
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 1.5e-22 112.1 293 28.3
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 1.5e-22 112.1 256 30.9
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 3.4e-22 110.9 357 28.6
Cre03.g159750 Chlamydomonas reinhardtii HOM05D005149 ORTHO05D006251 4.5e-22 110.5 286 34.3
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 4.5e-22 110.5 252 31.3
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 4.5e-22 110.5 256 31.6
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 5.8e-22 110.2 300 29.0
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 7.6e-22 109.8 273 30.8
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 1.7e-21 108.6 282 29.1
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 2.2e-21 108.2 372 28.5
Cc02_g32050 Coffea canephora HOM05D005149 ORTHO05D006251 6.4e-21 106.7 236 32.6
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 6.4e-21 106.7 254 30.7
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 4.2e-20 104.0 208 36.1
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 5.5e-20 103.6 347 24.5
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 9.3e-20 102.8 362 28.7
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 2.1e-19 101.7 256 31.2
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 3.5e-19 100.9 230 30.9
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 1.3e-18 99.0 283 28.3
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 1.8e-18 98.6 259 28.6
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 5.1e-18 97.1 201 32.3
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 1.1e-17 95.9 243 28.0
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 1.5e-17 95.5 388 25.8
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 2.5e-17 94.7 261 28.4
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 5.6e-17 93.6 150 36.0
Nn2g14693 Nelumbo nucifera HOM05D005149 ORTHO05D006251 1.3e-16 92.4 172 33.1
PRCOL_00005700 Prasinoderma coloniale HOM05D005149 ORTHO05D006251 2.4e-15 88.2 277 30.3
SEGI_10345 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 5.8e-14 83.6 137 35.0
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 3.8e-13 80.9 273 28.9
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 6.5e-13 80.1 444 25.9
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 1.9e-12 78.6 156 31.4
VMungo1127G1160 Vigna mungo HOM05D005149 ORTHO05D000001 1.9e-09 68.6 77 42.9
Gohir.D13G182000 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.6e-06 58.2 132 29.5
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 3.4e-06 57.8 173 28.9


User provided reference genes

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