Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023216 Carpinus fangiana HOM05D002001 ORTHO05D004100 4.5e-42 174.1 84 100.0
CiPaw.06G144700 Carya illinoinensis HOM05D002001 ORTHO05D004100 2.1e-18 95.5 82 52.4
CDE01G0324 Ceratophyllum demersum HOM05D002001 ORTHO05D004100 2.7e-18 95.1 82 48.8
CBR_g31441 Chara braunii HOM05D002001 ORTHO05D004100 2.7e-18 95.1 70 62.9
CSS0047146 Camellia sinensis var. sinensis HOM05D002001 ORTHO05D004100 3.5e-18 94.7 75 53.3
Lj5C255T12 Lonicera japonica HOM05D002001 ORTHO05D004100 3.5e-18 94.7 67 59.7
QL02p098463 Quercus lobata HOM05D002001 ORTHO05D004100 3.5e-18 94.7 82 52.4
Ah.01g004900 Amaranthus hybridus HOM05D002001 ORTHO05D004100 6.0e-18 94.0 82 51.2
Manes.10G123600 Manihot esculenta HOM05D002001 ORTHO05D004100 6.0e-18 94.0 82 52.4
Lj5A255T82 Lonicera japonica HOM05D002001 ORTHO05D004100 7.8e-18 93.6 74 54.1
ClCG11G013430 Citrullus lanatus HOM05D002001 ORTHO05D004100 1.0e-17 93.2 82 51.2
Ciclev10000468m.g Citrus clementina HOM05D002001 ORTHO05D004100 1.0e-17 93.2 82 51.2
Eucgr.G00400 Eucalyptus grandis HOM05D002001 ORTHO05D004100 1.0e-17 93.2 82 51.2
QL02p099792 Quercus lobata HOM05D002001 ORTHO05D004100 1.0e-17 93.2 82 51.2
Sabra17G0068100 Salix brachista HOM05D002001 ORTHO05D004100 1.0e-17 93.2 83 50.6
GSVIVG01023351001 Vitis vinifera HOM05D002001 ORTHO05D004100 1.0e-17 93.2 82 50.0
DCAR_006689 Daucus carota HOM05D002001 ORTHO05D004100 1.3e-17 92.8 74 54.1
CDE12G0623 Ceratophyllum demersum HOM05D002001 ORTHO05D004100 1.7e-17 92.4 82 47.6
MELO3C011841.2 Cucumis melo HOM05D002001 ORTHO05D004100 1.7e-17 92.4 83 49.4
MELO3C027046.2 Cucumis melo HOM05D002001 ORTHO05D004100 1.7e-17 92.4 83 49.4
THA.LOC104819173 Tarenaya hassleriana HOM05D002001 ORTHO05D004100 1.7e-17 92.4 69 58.0
TAR629G1401 Trochodendron aralioides HOM05D002001 ORTHO05D004100 1.7e-17 92.4 82 50.0
VMungo0540G2019 Vigna mungo HOM05D002001 ORTHO05D004100 1.7e-17 92.4 81 54.3
AUR62011671 Chenopodium quinoa HOM05D002001 ORTHO05D004100 2.3e-17 92.0 74 54.1
AUR62016494 Chenopodium quinoa HOM05D002001 ORTHO05D004100 2.3e-17 92.0 74 54.1
Ciclev10000467m.g Citrus clementina HOM05D002001 ORTHO05D004100 2.3e-17 92.0 82 50.0
COL.COLO4_11757 Corchorus olitorius HOM05D002001 ORTHO05D004100 2.3e-17 92.0 82 52.4
Nn1g09279 Nelumbo nucifera HOM05D002001 ORTHO05D004100 2.3e-17 92.0 82 50.0
AagrBONN_evm.TU.Sc2ySwM_344.449 Anthoceros agrestis HOM05D002001 ORTHO05D004100 3.0e-17 91.7 70 57.1
Ca_00055_v3 Cicer arietinum L. HOM05D002001 ORTHO05D004100 3.0e-17 91.7 82 51.2
Cc02_g22840 Coffea canephora HOM05D002001 ORTHO05D004100 3.0e-17 91.7 61 62.3
Lj6g0014440 Lotus japonicus HOM05D002001 ORTHO05D004100 3.0e-17 91.7 61 63.9
MBI04_g30788_MAGBIO Magnolia biondii HOM05D002001 ORTHO05D004100 3.0e-17 91.7 74 52.7
MBI04_g30789_MAGBIO Magnolia biondii HOM05D002001 ORTHO05D004100 3.0e-17 91.7 74 52.7
Sed0012035 Sechium edule HOM05D002001 ORTHO05D004100 3.0e-17 91.7 82 50.0
TWI14G0623 Tripterygium wilfordii HOM05D002001 ORTHO05D004100 3.0e-17 91.7 61 62.3
EL10Ac9g22038 Beta vulgaris HOM05D002001 ORTHO05D004100 3.9e-17 91.3 74 52.7
Duzib052G0396 Durio zibethinus HOM05D002001 ORTHO05D004100 3.9e-17 91.3 82 51.2
PSO063G5226 Papaver somniferum HOM05D002001 ORTHO05D004100 3.9e-17 91.3 64 57.8
Psat3g090080 Pisum sativum HOM05D002001 ORTHO05D004100 3.9e-17 91.3 64 60.9
TPR.G35593 Trifolium pratense HOM05D002001 ORTHO05D004100 3.9e-17 91.3 85 52.9
Actinidia06465 Actinidia chinensis HOM05D002001 ORTHO05D004100 5.1e-17 90.9 61 59.0
Actinidia26158 Actinidia chinensis HOM05D002001 ORTHO05D004100 5.1e-17 90.9 74 50.0
CANSAT11G0528 Cannabis sativa HOM05D002001 ORTHO05D004100 5.1e-17 90.9 74 54.1
CsaV3_5G029960 Cucumis sativus L. HOM05D002001 ORTHO05D004100 5.1e-17 90.9 82 50.0
Gohir.D13G034600 Gossypium hirsutum HOM05D002001 ORTHO05D004100 5.1e-17 90.9 82 51.2
Gorai.013G039200 Gossypium raimondii HOM05D002001 ORTHO05D004100 5.1e-17 90.9 82 51.2
Prupe.I006100 Prunus persica HOM05D002001 ORTHO05D004100 5.1e-17 90.9 82 50.0
vmacro19877 Vaccinium macrocarpon HOM05D002001 ORTHO05D004100 5.1e-17 90.9 61 60.7
vmacro19878 Vaccinium macrocarpon HOM05D002001 ORTHO05D004100 5.1e-17 90.9 61 60.7
GSVIVG01023380001 Vitis vinifera HOM05D002001 ORTHO05D004100 5.1e-17 90.9 61 59.0
Atru.chr10.1556 Acer truncatum HOM05D002001 ORTHO05D004100 6.6e-17 90.5 75 54.7
Haze_01809 Corylus avellana HOM05D002001 ORTHO05D004100 6.6e-17 90.5 82 51.2
Eucgr.G00404 Eucalyptus grandis HOM05D002001 ORTHO05D004100 6.6e-17 90.5 82 51.2
Gohir.A13G036300 Gossypium hirsutum HOM05D002001 ORTHO05D004100 6.6e-17 90.5 82 51.2
HPP92_015169 Vanilla planifolia HOM05D002001 ORTHO05D004100 6.6e-17 90.5 79 50.6
Ah.02g126190 Amaranthus hybridus HOM05D002001 ORTHO05D004100 8.6e-17 90.1 61 59.0
ATR0568G050 Amborella trichopoda HOM05D002001 ORTHO05D004100 8.6e-17 90.1 82 47.6
MSTRG.20312 Avicennia marina HOM05D002001 ORTHO05D004100 8.6e-17 90.1 82 47.6
Eucgr.G00401 Eucalyptus grandis HOM05D002001 ORTHO05D004100 8.6e-17 90.1 61 60.7
Atru.chr6.693 Acer truncatum HOM05D002001 ORTHO05D004100 1.1e-16 89.7 77 54.5
Duzib132G0735 Durio zibethinus HOM05D002001 ORTHO05D004100 1.1e-16 89.7 82 50.0
Medtr2g006180 Medicago truncatula HOM05D002001 ORTHO05D004100 1.1e-16 89.7 64 59.4
Phvul.006G217100 Phaseolus vulgaris HOM05D002001 ORTHO05D004100 1.1e-16 89.7 79 53.2
RcHm_v2.0_Chr7g0220981 Rosa chinensis HOM05D002001 ORTHO05D004100 1.1e-16 89.7 61 60.7
SEGI_21233 Sequoiadendron giganteum HOM05D002001 ORTHO05D004100 1.1e-16 89.7 79 51.9
Aa31sc291G30 Aethionema arabicum HOM05D002001 ORTHO05D004100 1.5e-16 89.4 69 53.6
arahy.Tifrunner.gnm1.ann1.97GRLX Arachis hypogaea HOM05D002001 ORTHO05D004100 1.5e-16 89.4 80 50.0
arahy.Tifrunner.gnm1.ann1.GST58F Arachis hypogaea HOM05D002001 ORTHO05D004100 1.5e-16 89.4 80 50.0
Prupe.1G574800 Prunus persica HOM05D002001 ORTHO05D004100 1.5e-16 89.4 82 50.0
PGR042G3798 Punica granatum HOM05D002001 ORTHO05D004100 1.5e-16 89.4 82 50.0
Sabra17G0068000 Salix brachista HOM05D002001 ORTHO05D004100 1.5e-16 89.4 83 50.6
GSVIVG01023373001 Vitis vinifera HOM05D002001 ORTHO05D004100 1.5e-16 89.4 62 58.1
Atru.chr10.1555 Acer truncatum HOM05D002001 ORTHO05D004100 1.9e-16 89.0 75 54.7
CARHR052150 Cardamine hirsuta HOM05D002001 ORTHO05D004100 1.9e-16 89.0 69 53.6
Dinv01850 Davidia involucrata HOM05D002001 ORTHO05D004100 1.9e-16 89.0 61 57.4
Dinv24311 Davidia involucrata HOM05D002001 ORTHO05D004100 1.9e-16 89.0 61 57.4
Migut.B00809 Erythranthe guttata HOM05D002001 ORTHO05D004100 1.9e-16 89.0 61 59.0
Os03g0852900 Oryza sativa ssp. japonica HOM05D002001 ORTHO05D004100 1.9e-16 89.0 61 59.0
Potri.017G076000 Populus trichocarpa HOM05D002001 ORTHO05D004100 1.9e-16 89.0 84 51.2
Nitab4.5_0000667g0210 Nicotiana tabacum HOM05D002001 ORTHO05D004100 2.5e-16 88.6 61 59.0
Nitab4.5_0007277g0010 Nicotiana tabacum HOM05D002001 ORTHO05D004100 2.5e-16 88.6 61 59.0
Sp2g03500 Schrenkiella parvula HOM05D002001 ORTHO05D004100 2.5e-16 88.6 69 53.6
Thecc.02G090300 Theobroma cacao HOM05D002001 ORTHO05D004100 2.5e-16 88.6 82 50.0
TAR629G1852 Trochodendron aralioides HOM05D002001 ORTHO05D004100 2.5e-16 88.6 82 48.8
Lalb_Chr20g0123631 Lupinus albus HOM05D002001 ORTHO05D004100 3.3e-16 88.2 79 53.2
Peaxi162Scf00003g03948 Petunia axillaris HOM05D002001 ORTHO05D004100 4.3e-16 87.8 61 57.4
Rhsim10G0102800 Rhododendron simsii HOM05D002001 ORTHO05D004100 4.3e-16 87.8 61 57.4
SalBow8G1128 Salvia bowleyana HOM05D005536 ORTHO05D004100 4.3e-16 87.8 61 57.4
MD08G1237400 Malus domestica HOM05D002001 ORTHO05D004100 5.6e-16 87.4 79 49.4
FAN22G0816 Fragaria x ananassa HOM05D002001 ORTHO05D004100 7.3e-16 87.0 71 50.7
Solyc07g049480.3 Solanum lycopersicum HOM05D002001 ORTHO05D004100 7.3e-16 87.0 61 55.7
Sopen07g024830 Solanum pennellii HOM05D002001 ORTHO05D004100 7.3e-16 87.0 61 55.7
PGSC0003DMG400000682 Solanum tuberosum HOM05D002001 ORTHO05D004100 7.3e-16 87.0 61 55.7
SGA_v2.0_scaffold92G28301 Striga asiatica HOM05D002001 ORTHO05D004100 7.3e-16 87.0 61 55.7
AL2G15430 Arabidopsis lyrata HOM05D002001 ORTHO05D004100 9.5e-16 86.7 69 52.2
AT1G61010 Arabidopsis thaliana HOM05D002001 ORTHO05D004100 9.5e-16 86.7 69 52.2
BcaC09g49340 Brassica carinata HOM05D002001 ORTHO05D004100 1.2e-15 86.3 75 48.0
A01p29840 Brassica napus HOM05D002001 ORTHO05D004100 1.2e-15 86.3 75 48.0
C01p37690 Brassica napus HOM05D002001 ORTHO05D004100 1.2e-15 86.3 75 48.0
BolC1t03733H Brassica oleracea HOM05D002001 ORTHO05D004100 1.2e-15 86.3 75 48.0
BraA01t03112Z Brassica rapa HOM05D002001 ORTHO05D004100 1.2e-15 86.3 75 48.0
FvH4_4g07000 Fragaria vesca HOM05D002001 ORTHO05D004100 1.2e-15 86.3 61 57.4
FAN07G2305 Fragaria x ananassa HOM05D002001 ORTHO05D004100 1.2e-15 86.3 61 57.4
FAN12G2583 Fragaria x ananassa HOM05D002001 ORTHO05D004100 1.2e-15 86.3 61 57.4
Lsat_1_v5_gn_7_79181 Lactuca sativa HOM05D002001 ORTHO05D004100 1.2e-15 86.3 79 48.1
MD15G1429300 Malus domestica HOM05D002001 ORTHO05D004100 1.2e-15 86.3 61 55.7
BcaB04g20308 Brassica carinata HOM05D002001 ORTHO05D004100 1.6e-15 85.9 69 52.2
Oeu034119.1 Olea europaea HOM05D002001 ORTHO05D004100 1.6e-15 85.9 65 56.9
Oeu064618.2 Olea europaea HOM05D002001 ORTHO05D004100 1.6e-15 85.9 65 56.9
Pp3c6_3520 Physcomitrium patens HOM05D002001 ORTHO05D004100 1.6e-15 85.9 80 52.5
Carub.0002s0418 Capsella rubella HOM05D002001 ORTHO05D004100 2.1e-15 85.5 69 50.7
Pp3c5_23920 Physcomitrium patens HOM05D002001 ORTHO05D004100 2.1e-15 85.5 61 59.0
FAN04G1414 Fragaria x ananassa HOM05D002001 ORTHO05D004100 2.8e-15 85.1 62 58.1
FAN13G2793 Fragaria x ananassa HOM05D002001 ORTHO05D004100 2.8e-15 85.1 61 55.7
Potri.017G076132 Populus trichocarpa HOM05D002001 ORTHO05D004100 2.8e-15 85.1 84 50.0
SHI08868 Sapria himalayana HOM05D002001 ORTHO05D004100 2.8e-15 85.1 61 57.4
FAN17G1518 Fragaria x ananassa HOM05D002001 ORTHO05D004100 3.6e-15 84.7 61 55.7
Zm00001eb064770 Zea mays HOM05D002001 ORTHO05D004100 4.7e-15 84.3 61 55.7
Zm00001eb210600 Zea mays HOM05D002001 ORTHO05D004100 4.7e-15 84.3 61 55.7
ECA236G3872 Erigeron canadensis HOM05D002001 ORTHO05D004100 6.2e-15 84.0 74 48.6
Aqoxy7G01152 Aquilegia oxysepala HOM05D002001 ORTHO05D004100 8.1e-15 83.6 79 49.4
Aqoxy7G01153 Aquilegia oxysepala HOM05D002001 ORTHO05D004100 8.1e-15 83.6 79 49.4
GSVIVG01023355001 Vitis vinifera HOM05D002001 ORTHO05D004100 8.1e-15 83.6 82 46.3
ATR0568G179 Amborella trichopoda HOM05D002001 ORTHO05D004100 1.4e-14 82.8 82 43.9
CAN.G529.48 Capsicum annuum HOM05D002001 ORTHO05D004100 1.4e-14 82.8 61 50.8
Mapoly0069s0028 Marchantia polymorpha HOM05D002001 ORTHO05D004100 1.4e-14 82.8 61 55.7
MCO04G421 Micromonas commoda HOM05D002001 ORTHO05D004100 1.4e-14 82.8 61 57.4
FAN03G1556 Fragaria x ananassa HOM05D002001 ORTHO05D004100 2.4e-14 82.0 61 54.1
RcHm_v2.0_Chr4g0399131 Rosa chinensis HOM05D002001 ORTHO05D004100 3.1e-14 81.6 60 55.0
SMO270G0079 Selaginella moellendorffii HOM05D002001 ORTHO05D004100 3.1e-14 81.6 73 45.2
SMO306G0001 Selaginella moellendorffii HOM05D002001 ORTHO05D004100 4.0e-14 81.3 70 45.7
unitig_22.g6110 Utricularia gibba HOM05D002001 ORTHO05D004100 4.0e-14 81.3 61 50.8
Hund06801 Selenicereus undatus HOM05D002001 ORTHO05D004100 8.9e-14 80.1 55 58.2
HanXRQChr17g0559661 Helianthus annuus HOM05D002001 ORTHO05D004100 1.5e-13 79.3 54 57.4
Cre12.g498050 Chlamydomonas reinhardtii HOM05D002001 ORTHO05D004100 3.4e-13 78.2 71 50.7
PRCOL_00001441 Prasinoderma coloniale HOM05D002001 ORTHO05D004100 3.4e-13 78.2 74 44.6
Glyma.08G188800 Glycine max HOM05D002001 ORTHO05D004100 2.2e-12 75.5 64 45.3
AagrBONN_evm.TU.Sc2ySwM_344.452 Anthoceros agrestis HOM05D002001 ORTHO05D004100 2.9e-12 75.1 71 49.3
Haze_26930 Corylus avellana HOM05D002001 ORTHO05D004100 3.8e-12 74.7 62 48.4
Oeu023418.1 Olea europaea HOM05D002001 ORTHO05D004100 6.6e-09 63.9 67 47.8
CiPaw.08G110700 Carya illinoinensis HOM05D002001 ORTHO05D004100 3.3e-08 61.6 42 57.1
Thhalv10024010m.g Eutrema salsugineum HOM05D002001 ORTHO05D004100 6.2e-07 57.4 69 42.0
FvH4_5g28771 Fragaria vesca HOM05D002001 ORTHO05D004100 2.4e-06 55.5 37 59.5
Rhsim10G0102700 Rhododendron simsii HOM05D002001 ORTHO05D004100 4.0e-06 54.7 60 38.3


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