Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 1.3e-241 839.3 439 100.0
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 5.8e-205 717.6 440 85.2
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 4.0e-198 694.9 438 82.2
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 3.9e-193 678.3 440 81.1
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.5e-192 676.4 436 81.7
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 2.0e-189 666.0 438 80.1
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.3e-188 663.3 438 79.7
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.7e-188 662.9 436 81.0
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 3.8e-188 661.8 438 80.4
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 3.8e-188 661.8 449 78.4
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 3.8e-188 661.8 438 79.5
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 1.1e-187 660.2 521 69.1
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 3.2e-187 658.7 439 78.8
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 9.2e-187 657.1 438 79.5
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 9.2e-187 657.1 439 78.6
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 1.2e-186 656.8 440 79.5
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 3.3e-184 648.7 438 77.9
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 9.6e-184 647.1 438 78.8
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.6e-183 646.4 437 78.3
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.8e-183 645.6 438 78.5
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 8.1e-183 644.0 438 79.2
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 1.3e-180 636.7 438 75.8
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 3.8e-180 635.2 438 76.9
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 3.2e-179 632.1 436 76.8
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 5.4e-179 631.3 438 76.0
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 9.3e-179 630.6 439 77.9
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 2.1e-178 629.4 438 75.6
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 6.6e-177 624.4 436 75.2
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 1.1e-176 623.6 444 75.0
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 7.3e-176 620.9 439 75.2
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 2.6e-173 612.5 443 73.8
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 8.4e-172 607.4 438 74.7
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 1.1e-171 607.1 444 73.0
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 7.1e-171 604.4 445 74.6
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 1.6e-170 603.2 521 65.3
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 7.9e-170 600.9 437 73.7
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.9e-168 596.3 441 73.2
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 7.4e-168 594.3 560 62.5
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 8.1e-167 590.9 440 72.0
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 6.9e-166 587.8 540 63.5
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 2.9e-164 582.4 436 72.5
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 4.9e-164 581.6 438 71.9
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.9e-164 581.6 439 72.7
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 4.2e-163 578.6 437 69.6
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 6.0e-162 574.7 448 70.5
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 6.0e-162 574.7 427 73.1
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 5.6e-160 568.2 360 81.1
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 9.6e-160 567.4 431 69.8
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 2.4e-158 562.8 436 70.0
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.2e-156 556.2 439 69.9
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 2.5e-155 552.7 440 69.5
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 1.2e-154 550.4 438 67.6
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 4.6e-154 548.5 439 68.3
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 4.6e-154 548.5 358 79.9
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 5.1e-153 545.0 437 68.2
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 6.7e-153 544.7 438 68.7
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.1e-152 543.9 323 87.9
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 3.7e-151 538.9 440 67.0
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.8e-150 536.6 443 68.4
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 4.1e-150 535.4 438 67.4
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 9.0e-150 534.3 441 67.6
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 6.5e-148 528.1 414 69.8
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.6e-146 523.5 440 66.8
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 2.7e-146 522.7 455 64.0
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 4.6e-146 521.9 459 65.4
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 9.7e-144 514.2 456 63.4
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.3e-143 513.8 372 72.6
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 1.7e-143 513.5 457 63.5
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 3.7e-143 512.3 452 63.5
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 3.7e-143 512.3 360 75.6
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 6.3e-143 511.5 459 63.0
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 6.3e-143 511.5 360 74.2
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.9e-140 502.7 362 75.7
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 7.2e-139 498.0 357 74.2
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.6e-138 496.9 364 73.1
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 4.4e-136 488.8 356 72.8
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 9.7e-136 487.6 414 64.7
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 4.8e-135 485.3 438 65.1
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 2.2e-132 476.5 409 65.3
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 2.5e-131 473.0 438 60.7
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.6e-130 470.3 425 63.8
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.8e-129 466.8 438 62.1
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 2.0e-128 463.4 456 61.2
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 5.7e-128 461.8 444 58.8
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 2.0e-125 453.4 358 67.3
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.0e-124 451.1 438 60.3
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 5.0e-124 448.7 445 60.4
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 1.1e-123 447.6 364 66.5
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 8.0e-122 441.4 435 56.1
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 1.0e-121 441.0 440 56.6
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 1.4e-121 440.7 359 68.0
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 1.4e-121 440.7 359 67.4
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 3.0e-121 439.5 360 66.9
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 4.0e-121 439.1 440 58.0
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 4.8e-119 432.2 360 66.9
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 4.2e-115 419.1 224 96.0
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 3.6e-114 416.0 449 58.4
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 3.4e-112 409.5 353 66.3
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.4e-110 404.1 358 62.0
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 5.4e-110 402.1 358 62.0
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 1.2e-106 391.0 395 56.5
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 1.8e-105 387.1 334 62.6
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 8.3e-103 378.3 426 55.4
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 2.9e-95 353.2 407 51.6
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 2.4e-94 350.1 447 49.2
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 1.3e-92 344.4 418 47.1
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 3.0e-92 343.2 399 53.6
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.3e-91 339.3 303 64.7
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.2e-86 323.2 367 54.5
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 2.1e-85 320.5 309 57.9
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 6.0e-77 292.4 291 63.6
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 1.2e-74 284.6 325 53.8
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.3e-68 264.6 216 67.1
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 1.1e-49 201.8 301 40.5
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 1.4e-49 201.4 331 43.5
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 3.5e-45 186.8 310 39.7
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 5.5e-38 162.9 139 61.2
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.1e-33 146.7 79 93.7
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 2.0e-32 144.4 79 92.4
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 3.4e-32 143.7 79 91.1
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 1.7e-31 141.4 72 98.6
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 5.0e-31 139.8 79 88.6
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 1.1e-30 138.7 79 88.6
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 2.7e-29 134.0 79 84.8
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.6e-29 133.7 79 86.1
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 4.6e-29 133.3 79 87.3
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 6.1e-29 132.9 79 87.3
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.0e-28 132.1 79 82.3
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 1.0e-28 132.1 79 82.3
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 6.7e-28 129.4 79 82.3
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 6.7e-28 129.4 79 82.3
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 3.9e-20 103.6 92 64.1
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 7.2e-14 82.8 45 88.9
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 5.7e-11 73.2 90 45.6
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 6.3e-10 69.7 44 77.3
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.4e-09 68.6 74 47.3
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 4.5e-08 63.5 30 100.0


User provided reference genes

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