Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g10020 Coffea canephora HOM05D004820 ORTHO05D005946 8.0e-209 730.3 411 100.0
SGA_v2.0_scaffold81G26015 Striga asiatica HOM05D004820 ORTHO05D005946 4.2e-173 611.7 417 80.6
Oeu041704.1 Olea europaea HOM05D004820 ORTHO05D005946 3.5e-172 608.6 420 83.6
Migut.N02046 Erythranthe guttata HOM05D004820 ORTHO05D005946 3.4e-167 592.0 419 75.4
Solyc09g065280.4 Solanum lycopersicum HOM05D004820 ORTHO05D005946 1.0e-166 590.5 413 75.5
Sopen09g027030 Solanum pennellii HOM05D004820 ORTHO05D005946 4.9e-166 588.2 413 80.1
CAN.G590.6 Capsicum annuum HOM05D004820 ORTHO05D005946 8.4e-166 587.4 414 74.2
PGSC0003DMG400019362 Solanum tuberosum HOM05D004820 ORTHO05D005946 4.6e-164 581.6 413 78.2
Actinidia00769 Actinidia chinensis HOM05D004820 ORTHO05D005946 8.7e-163 577.4 423 79.2
Nn4g26288 Nelumbo nucifera HOM05D004820 ORTHO05D005946 1.9e-162 576.2 423 77.8
CSS0006431 Camellia sinensis var. sinensis HOM05D004820 ORTHO05D005946 2.5e-162 575.9 391 83.4
MSTRG.17449 Avicennia marina HOM05D004820 ORTHO05D005946 1.6e-161 573.2 414 80.9
Glyma.19G157200 Glycine max HOM05D004820 ORTHO05D005946 2.1e-161 572.8 411 76.2
Ca_08606_v3 Cicer arietinum L. HOM05D004820 ORTHO05D005946 1.1e-160 570.5 413 81.4
Glyma.03G155000 Glycine max HOM05D004820 ORTHO05D005946 1.8e-160 569.7 415 76.9
Medtr7g095000 Medicago truncatula HOM05D004820 ORTHO05D005946 1.2e-159 567.0 413 81.1
Sc05g0005630 Simmondsia chinensis HOM05D004820 ORTHO05D005946 1.5e-159 566.6 418 75.6
Eucgr.K03365 Eucalyptus grandis HOM05D004820 ORTHO05D005946 2.2e-158 562.8 416 79.1
CiPaw.08G106000 Carya illinoinensis HOM05D004820 ORTHO05D005946 2.9e-158 562.4 417 76.3
TPR.G9917 Trifolium pratense HOM05D004820 ORTHO05D005946 2.9e-158 562.4 414 78.7
Gohir.D08G075000 Gossypium hirsutum HOM05D004820 ORTHO05D005946 6.5e-158 561.2 425 72.9
Manes.01G206900 Manihot esculenta HOM05D004820 ORTHO05D005946 2.5e-157 559.3 415 78.6
VMungo1383G2933 Vigna mungo HOM05D004820 ORTHO05D005946 3.2e-157 558.9 413 75.5
Thecc.01G277300 Theobroma cacao HOM05D004820 ORTHO05D005946 1.2e-156 557.0 424 77.4
Gohir.A08G066300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 3.5e-156 555.4 425 76.2
TAR362G1079 Trochodendron aralioides HOM05D004820 ORTHO05D005946 3.5e-156 555.4 420 72.9
Ciclev10020348m.g Citrus clementina HOM05D004820 ORTHO05D005946 3.9e-155 552.0 418 75.1
Gorai.004G216400 Gossypium raimondii HOM05D004820 ORTHO05D005946 8.7e-155 550.8 418 74.4
Lj4g0024215 Lotus japonicus HOM05D004820 ORTHO05D005946 1.1e-154 550.4 411 76.2
Atru.chr5.1456 Acer truncatum HOM05D004820 ORTHO05D005946 1.5e-154 550.1 421 73.2
Duzib211G0468 Durio zibethinus HOM05D004820 ORTHO05D005946 1.5e-154 550.1 424 77.6
Duzib138G0452 Durio zibethinus HOM05D004820 ORTHO05D005946 1.9e-154 549.7 424 72.4
PGR044G0684 Punica granatum HOM05D004820 ORTHO05D005946 2.5e-154 549.3 418 79.2
Gohir.A08G186300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 3.3e-154 548.9 418 74.4
Gohir.D08G204400 Gossypium hirsutum HOM05D004820 ORTHO05D005946 4.3e-154 548.5 418 74.4
Cpa.g.sc52.45 Carica papaya HOM05D004820 ORTHO05D005946 7.4e-154 547.7 423 75.7
Psat3g064000 Pisum sativum HOM05D004820 ORTHO05D005946 2.8e-153 545.8 413 78.7
QL12p021397 Quercus lobata HOM05D004820 ORTHO05D005946 3.7e-153 545.4 413 73.6
TWI14G0518 Tripterygium wilfordii HOM05D004820 ORTHO05D005946 1.1e-152 543.9 413 72.2
arahy.Tifrunner.gnm1.ann1.HALK3W Arachis hypogaea HOM05D004820 ORTHO05D005946 4.1e-152 542.0 428 72.9
CANSAT25G3765 Cannabis sativa HOM05D004820 ORTHO05D005946 5.3e-152 541.6 421 75.1
arahy.Tifrunner.gnm1.ann1.JHLY8X Arachis hypogaea HOM05D004820 ORTHO05D005946 9.0e-152 540.8 428 72.7
Gorai.004G079300 Gossypium raimondii HOM05D004820 ORTHO05D005946 9.0e-152 540.8 423 70.4
arahy.Tifrunner.gnm1.ann1.NQ54M2 Arachis hypogaea HOM05D004820 ORTHO05D005946 2.6e-151 539.3 428 72.7
Potri.005G210600 Populus trichocarpa HOM05D004820 ORTHO05D005946 3.4e-151 538.9 420 75.2
MD03G1263300 Malus domestica HOM05D004820 ORTHO05D005946 2.2e-150 536.2 417 76.0
Phvul.005G035400 Phaseolus vulgaris HOM05D004820 ORTHO05D005946 6.5e-150 534.6 413 73.4
CsaV3_7G028060 Cucumis sativus L. HOM05D004820 ORTHO05D005946 1.1e-149 533.9 422 74.9
MD11G1284100 Malus domestica HOM05D004820 ORTHO05D005946 3.2e-149 532.3 417 75.3
MELO3C015826.2 Cucumis melo HOM05D004820 ORTHO05D005946 4.2e-149 531.9 427 72.8
Sabra05G0160800 Salix brachista HOM05D004820 ORTHO05D005946 2.1e-148 529.6 426 73.7
Lsat_1_v5_gn_5_187781 Lactuca sativa HOM05D004820 ORTHO05D005946 2.7e-148 529.3 398 77.1
THA.LOC104801242 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 4.6e-148 528.5 420 73.8
THA.LOC104815940 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 6.1e-148 528.1 419 71.4
Lalb_Chr06g0162971 Lupinus albus HOM05D004820 ORTHO05D005946 3.0e-147 525.8 413 71.7
Sed0001544 Sechium edule HOM05D004820 ORTHO05D005946 6.7e-147 524.6 423 74.2
arahy.Tifrunner.gnm1.ann1.X2D3U2 Arachis hypogaea HOM05D004820 ORTHO05D005946 3.3e-146 522.3 428 70.6
HanXRQChr01g0003021 Helianthus annuus HOM05D004820 ORTHO05D005946 5.9e-143 511.5 396 75.5
AUR62027118 Chenopodium quinoa HOM05D004820 ORTHO05D005946 1.3e-142 510.4 417 70.5
AUR62012894 Chenopodium quinoa HOM05D004820 ORTHO05D005946 2.2e-142 509.6 415 72.3
PSO210G1690 Papaver somniferum HOM05D004820 ORTHO05D005946 2.9e-142 509.2 412 72.1
Aa31LG1G9390 Aethionema arabicum HOM05D004820 ORTHO05D005946 3.8e-142 508.8 427 68.6
AL1G12610 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 1.6e-140 503.4 424 66.5
PSO761G0350 Papaver somniferum HOM05D004820 ORTHO05D005946 1.6e-140 503.4 412 68.7
A09p68340 Brassica napus HOM05D004820 ORTHO05D005946 1.0e-139 500.7 419 66.3
HPP92_018354 Vanilla planifolia HOM05D004820 ORTHO05D005946 1.8e-139 500.0 423 71.2
EL10Ac8g18597 Beta vulgaris HOM05D004820 ORTHO05D005946 6.7e-139 498.0 414 66.7
Prupe.8G239700 Prunus persica HOM05D004820 ORTHO05D005946 1.1e-138 497.3 418 72.5
Ah.01g024010 Amaranthus hybridus HOM05D004820 ORTHO05D005946 3.3e-138 495.7 409 70.9
C08p52910 Brassica napus HOM05D004820 ORTHO05D005946 2.8e-137 492.7 416 70.4
FvH4_2g23380 Fragaria vesca HOM05D004820 ORTHO05D005946 8.2e-137 491.1 419 69.9
BolC8t52807H Brassica oleracea HOM05D004820 ORTHO05D005946 1.1e-136 490.7 416 70.0
ECA248G2754 Erigeron canadensis HOM05D004820 ORTHO05D005946 9.1e-136 487.6 417 69.3
BcaC07g42265 Brassica carinata HOM05D004820 ORTHO05D005946 2.0e-135 486.5 416 65.6
FAN15G1635 Fragaria x ananassa HOM05D004820 ORTHO05D005946 5.9e-135 485.0 419 70.6
FAN20G0972 Fragaria x ananassa HOM05D004820 ORTHO05D005946 7.7e-135 484.6 419 66.3
QL03p020183 Quercus lobata HOM05D004820 ORTHO05D005946 1.7e-134 483.4 381 72.7
RcHm_v2.0_Chr6g0290841 Rosa chinensis HOM05D004820 ORTHO05D005946 1.7e-134 483.4 424 69.3
FAN27G0992 Fragaria x ananassa HOM05D004820 ORTHO05D005946 1.9e-133 479.9 428 69.6
FAN24G1940 Fragaria x ananassa HOM05D004820 ORTHO05D005946 7.2e-133 478.0 437 66.8
SEGI_11361 Sequoiadendron giganteum HOM05D004820 ORTHO05D005946 1.6e-132 476.9 405 66.9
Carub.0001s0228 Capsella rubella HOM05D004820 ORTHO05D005946 1.5e-130 470.3 334 74.9
CARHR002470 Cardamine hirsuta HOM05D004820 ORTHO05D005946 2.0e-130 469.9 334 74.6
Thhalv10009621m.g Eutrema salsugineum HOM05D004820 ORTHO05D005946 4.1e-128 462.2 327 75.5
Zm00001eb426860 Zea mays HOM05D004820 ORTHO05D005946 4.1e-128 462.2 409 63.1
Zm00001eb324990 Zea mays HOM05D004820 ORTHO05D005946 4.5e-127 458.8 441 58.5
AT1G03140 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 1.3e-126 457.2 332 74.1
Mapoly0140s0012 Marchantia polymorpha HOM05D004820 ORTHO05D005946 1.3e-126 457.2 416 59.4
Zm00001eb426810 Zea mays HOM05D004820 ORTHO05D005946 5.0e-126 455.3 406 62.3
Zm00001eb426820 Zea mays HOM05D004820 ORTHO05D005946 1.5e-125 453.8 408 62.5
Zm00001eb426800 Zea mays HOM05D004820 ORTHO05D005946 9.4e-125 451.1 404 62.1
C08p00420 Brassica napus HOM05D004820 ORTHO05D005946 1.6e-124 450.3 419 66.8
A08p37470 Brassica napus HOM05D004820 ORTHO05D005946 6.1e-124 448.4 335 72.5
BraA08t35645Z Brassica rapa HOM05D004820 ORTHO05D005946 6.1e-124 448.4 335 72.5
Pp3c21_19780 Physcomitrium patens HOM05D004820 ORTHO05D005946 6.1e-124 448.4 412 59.0
Lj4g0011679 Lotus japonicus HOM05D004820 ORTHO05D005946 4.0e-123 445.7 396 66.2
Os07g0571900 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 4.0e-123 445.7 446 60.3
Zm00001eb426850 Zea mays HOM05D004820 ORTHO05D005946 6.8e-123 444.9 388 62.9
BolC8t46841H Brassica oleracea HOM05D004820 ORTHO05D005946 1.2e-122 444.1 421 66.0
Sp1g02160 Schrenkiella parvula HOM05D004820 ORTHO05D005946 2.8e-121 439.5 427 64.4
AL1G45340 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 7.0e-120 434.9 410 60.7
SMO356G0463 Selaginella moellendorffii HOM05D004820 ORTHO05D005946 9.8e-114 414.5 394 65.0
SpUn0083_0020 Schrenkiella parvula HOM05D004820 ORTHO05D005946 3.5e-111 406.0 369 59.6
Sp5g11480 Schrenkiella parvula HOM05D004820 ORTHO05D005946 7.2e-109 398.3 370 58.9
PGSC0003DMG400010602 Solanum tuberosum HOM05D004820 ORTHO05D005946 5.2e-107 392.1 408 55.1
Oeu028072.3 Olea europaea HOM05D004820 ORTHO05D005946 3.2e-104 382.9 281 83.6
PGSC0003DMG400010600 Solanum tuberosum HOM05D004820 ORTHO05D005946 2.3e-102 376.7 411 54.5
COL.COLO4_09079 Corchorus olitorius HOM05D004820 ORTHO05D005946 1.1e-101 374.4 451 55.9
Lalb_Chr02g0142711 Lupinus albus HOM05D004820 ORTHO05D005946 2.5e-101 373.2 224 83.9
Zm00001eb216840 Zea mays HOM05D004820 ORTHO05D005946 3.4e-98 362.8 408 54.2
Rhsim01G0274100 Rhododendron simsii HOM05D004820 ORTHO05D005946 4.6e-95 352.4 425 51.5
CBR_g23335 Chara braunii HOM05D004820 ORTHO05D005946 6.2e-92 342.0 442 51.1
AT1G54590 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 3.7e-89 332.8 288 64.9
Solyc07g052190.1 Solanum lycopersicum HOM05D004820 ORTHO05D005946 8.6e-86 321.6 366 54.4
Sopen07g025700 Solanum pennellii HOM05D004820 ORTHO05D005946 1.4e-80 304.3 339 53.7
CAN.G198.19 Capsicum annuum HOM05D004820 ORTHO05D005946 1.2e-79 301.2 345 51.6
GSVIVG01001158001 Vitis vinifera HOM05D004820 ORTHO05D005946 1.2e-74 284.6 160 88.8
SHI31236 Sapria himalayana HOM05D004820 ORTHO05D005946 1.4e-72 277.7 276 57.6
Sopen07g025830 Solanum pennellii HOM05D004820 ORTHO05D005946 9.3e-72 275.0 333 53.8
Zm00001eb426870 Zea mays HOM05D004820 ORTHO05D005946 2.7e-71 273.5 168 82.1
Cpa.g.sc52.46 Carica papaya HOM05D004820 ORTHO05D005946 6.2e-60 235.7 139 85.6
Solyc07g052050.2 Solanum lycopersicum HOM05D004820 ORTHO05D005946 2.0e-58 230.7 158 70.9
SHI31234 Sapria himalayana HOM05D004820 ORTHO05D005946 2.3e-54 217.2 115 90.4
HanXRQChr15g0487721 Helianthus annuus HOM05D004820 ORTHO05D005946 1.1e-51 208.4 167 64.7
Sopen07g025610 Solanum pennellii HOM05D004820 ORTHO05D005946 2.5e-45 187.2 253 48.2
Lj1g0027313 Lotus japonicus HOM05D004820 ORTHO05D005946 4.3e-45 186.4 159 61.0
Zm00001eb426830 Zea mays HOM05D004820 ORTHO05D005946 1.6e-44 184.5 116 83.6
Sopen07g025690 Solanum pennellii HOM05D004820 ORTHO05D005946 4.1e-43 179.9 123 72.4
Os03g0701100 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 6.9e-43 179.1 276 48.2
MCO06G052 Micromonas commoda HOM05D004820 ORTHO05D005946 2.1e-39 167.5 156 53.2
Cre13.g567750 Chlamydomonas reinhardtii HOM05D004820 ORTHO05D005946 1.3e-36 158.3 411 35.0
Nitab4.5_0003852g0050 Nicotiana tabacum HOM05D004820 ORTHO05D005946 2.5e-29 134.0 171 49.1
BraA09t42170Z Brassica rapa HOM05D004820 ORTHO05D005946 1.3e-28 131.7 154 61.7
Gohir.D05G222300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.4e-27 128.3 64 92.2
Gohir.D11G242500 Gossypium hirsutum HOM05D004820 ORTHO05D005946 4.1e-27 126.7 64 90.6
Gorai.009G229700 Gossypium raimondii HOM05D004820 ORTHO05D005946 4.1e-27 126.7 64 90.6
CARHR182160 Cardamine hirsuta HOM05D004820 ORTHO05D005946 9.1e-27 125.6 116 57.8
Gorai.011G187700 Gossypium raimondii HOM05D004820 ORTHO05D005946 1.2e-26 125.2 64 90.6
Zm00001eb078380 Zea mays HOM05D004820 ORTHO05D005946 3.4e-26 123.6 72 84.7
Zm00001eb180190 Zea mays HOM05D004820 ORTHO05D005946 6.5e-25 119.4 68 86.8
Zm00001eb017440 Zea mays HOM05D004820 ORTHO05D005946 1.6e-23 114.8 66 84.8
Zm00001eb368520 Zea mays HOM05D004820 ORTHO05D005946 1.6e-23 114.8 68 83.8
TAR365G1077 Trochodendron aralioides HOM05D004820 ORTHO05D005946 2.1e-23 114.4 97 60.8
vmacro14915 Vaccinium macrocarpon HOM05D004820 ORTHO05D005946 4.7e-23 113.2 141 60.3
Nitab4.5_0003327g0040 Nicotiana tabacum HOM05D004820 ORTHO05D005946 7.9e-23 112.5 152 48.0
Nn4g23784 Nelumbo nucifera HOM05D004820 ORTHO05D005946 5.0e-17 93.2 108 50.0
Dinv32923 Davidia involucrata HOM05D004820 ORTHO05D005946 7.0e-11 72.8 43 86.0
C06p09790 Brassica napus HOM05D004820 ORTHO05D001418 7.7e-10 69.3 74 51.4
BolC6t36051H Brassica oleracea HOM05D004820 ORTHO05D001418 7.7e-10 69.3 74 51.4
Actinidia10913 Actinidia chinensis HOM05D004820 ORTHO05D005946 2.1e-07 61.2 91 74.7


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