Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g28530 Coffea canephora HOM05D001257 ORTHO05D009836 1.4e-78 296.2 148 100.0
Cc02_g28510 Coffea canephora HOM05D001257 ORTHO05D009836 1.4e-41 173.3 127 75.6
PGSC0003DMG402006783 Solanum tuberosum HOM05D001257 ORTHO05D009836 1.6e-29 133.3 128 53.1
Sopen01g034650 Solanum pennellii HOM05D001257 ORTHO05D009836 2.0e-29 132.9 128 52.3
Solyc01g087690.3 Solanum lycopersicum HOM05D001257 ORTHO05D009836 3.5e-29 132.1 128 52.3
Nitab4.5_0000707g0050 Nicotiana tabacum HOM05D001257 ORTHO05D009836 4.6e-29 131.7 130 53.1
Peaxi162Scf00694g00316 Petunia axillaris HOM05D001257 ORTHO05D009836 4.6e-29 131.7 128 53.1
Nitab4.5_0004053g0100 Nicotiana tabacum HOM05D001257 ORTHO05D009836 1.3e-28 130.2 128 52.3
GSVIVG01032193001 Vitis vinifera HOM05D001257 ORTHO05D009836 2.3e-28 129.4 128 55.5
Dinv09312 Davidia involucrata HOM05D001257 ORTHO05D009836 3.0e-28 129.0 129 55.8
Migut.B01271 Erythranthe guttata HOM05D001257 ORTHO05D009836 3.9e-28 128.6 127 55.9
CAN.G219.72 Capsicum annuum HOM05D001257 ORTHO05D009836 7.3e-27 124.4 128 50.8
Ciclev10033747m.g Citrus clementina HOM05D001257 ORTHO05D009836 1.8e-25 119.8 128 53.1
SalBow5G4767 Salvia bowleyana HOM05D001257 ORTHO05D009836 1.2e-24 117.1 127 52.0
Sp6g30290 Schrenkiella parvula HOM05D001257 ORTHO05D009836 9.8e-24 114.0 128 47.7
Atru.chr11.2579 Acer truncatum HOM05D001257 ORTHO05D009836 1.3e-23 113.6 128 47.7
AT5G13730 Arabidopsis thaliana HOM05D001257 ORTHO05D009836 1.3e-23 113.6 128 47.7
Lj9A640G57 Lonicera japonica HOM05D001257 ORTHO05D009836 1.3e-23 113.6 127 48.8
A02p02140 Brassica napus HOM05D001257 ORTHO05D009836 1.7e-23 113.2 128 47.7
BraA02t05184Z Brassica rapa HOM05D001535 ORTHO05D004010 1.7e-23 113.2 128 47.7
AL6G24340 Arabidopsis lyrata HOM05D001257 ORTHO05D009836 2.2e-23 112.8 128 47.7
Carub.0006s1191 Capsella rubella HOM05D001257 ORTHO05D009836 2.2e-23 112.8 128 47.7
BcaNung04189 Brassica carinata HOM05D001257 ORTHO05D009836 2.9e-23 112.5 128 47.7
C02p06400 Brassica napus HOM05D001257 ORTHO05D009836 2.9e-23 112.5 128 47.7
BolC2t06583H Brassica oleracea HOM05D001257 ORTHO05D009836 2.9e-23 112.5 128 47.7
Thhalv10013654m.g Eutrema salsugineum HOM05D001257 ORTHO05D009836 2.9e-23 112.5 128 46.1
unitig_22.g5434 Utricularia gibba HOM05D001257 ORTHO05D009836 2.9e-23 112.5 127 48.8
Nn2g15224 Nelumbo nucifera HOM05D001257 ORTHO05D009836 3.7e-23 112.1 127 48.8
CARHR199720 Cardamine hirsuta HOM05D001257 ORTHO05D009836 4.9e-23 111.7 128 46.9
Lalb_Chr04g0263881 Lupinus albus HOM05D001257 ORTHO05D009836 8.3e-23 110.9 128 46.9
BcaC04g24259 Brassica carinata HOM05D001257 ORTHO05D009836 1.4e-22 110.2 128 46.9
A10p24590 Brassica napus HOM05D001257 ORTHO05D009836 1.4e-22 110.2 128 46.9
BraA10t44522Z Brassica rapa HOM05D001257 ORTHO05D009836 1.4e-22 110.2 128 46.9
TPR.G14564 Trifolium pratense HOM05D001257 ORTHO05D009836 1.4e-22 110.2 128 47.7
BcaC04g19084 Brassica carinata HOM05D001257 ORTHO05D009836 1.9e-22 109.8 128 46.9
BolC9t59184H Brassica oleracea HOM05D001257 ORTHO05D009836 1.9e-22 109.8 128 46.9
DCAR_022376 Daucus carota HOM05D001257 ORTHO05D009836 1.9e-22 109.8 127 47.2
THA.LOC104826688 Tarenaya hassleriana HOM05D001257 ORTHO05D009836 1.9e-22 109.8 130 46.9
C09p63370 Brassica napus HOM05D001257 ORTHO05D009836 4.1e-22 108.6 128 46.1
Hma1.2p1_0685F.1_g203110 Hydrangea macrophylla HOM05D001257 ORTHO05D009836 5.4e-22 108.2 142 48.6
TWI09G1371 Tripterygium wilfordii HOM05D001257 ORTHO05D009836 9.2e-22 107.5 128 49.2
Aa31LG1G19830 Aethionema arabicum HOM05D001257 ORTHO05D009836 1.6e-21 106.7 128 45.3
CANSAT80G1942 Cannabis sativa HOM05D001257 ORTHO05D009836 1.6e-21 106.7 128 46.1
TAR623G0345 Trochodendron aralioides HOM05D001257 ORTHO05D009836 2.1e-21 106.3 127 48.0
Cfa022634 Carpinus fangiana HOM05D001257 ORTHO05D009836 2.7e-21 105.9 127 48.0
PSO832G2593 Papaver somniferum HOM05D001257 ORTHO05D009836 2.7e-21 105.9 127 44.1
Sed0005853 Sechium edule HOM05D001257 ORTHO05D009836 3.5e-21 105.5 127 45.7
CiPaw.14G002600 Carya illinoinensis HOM05D001257 ORTHO05D009836 4.6e-21 105.1 128 48.4
MELO3C023996.2 Cucumis melo HOM05D001257 ORTHO05D009836 4.6e-21 105.1 127 45.7
Haze_03135 Corylus avellana HOM05D001257 ORTHO05D009836 6.0e-21 104.8 127 47.2
MBI19_g45283_MAGBIO Magnolia biondii HOM05D001257 ORTHO05D009836 6.0e-21 104.8 127 47.2
Medtr3g033420 Medicago truncatula HOM05D001257 ORTHO05D009836 7.8e-21 104.4 129 45.7
QL04p009795 Quercus lobata HOM05D001257 ORTHO05D009836 7.8e-21 104.4 128 45.3
VMungo1080G0085 Vigna mungo HOM05D001257 ORTHO05D009836 7.8e-21 104.4 128 43.8
CsaV3_3G031970 Cucumis sativus L. HOM05D001257 ORTHO05D009836 1.3e-20 103.6 127 44.9
Cpa.g.sc125.39 Carica papaya HOM05D001257 ORTHO05D009836 1.7e-20 103.2 127 45.7
ClCG10G012190 Citrullus lanatus HOM05D001257 ORTHO05D009836 1.7e-20 103.2 127 45.7
Haze_03132 Corylus avellana HOM05D001257 ORTHO05D009836 2.3e-20 102.8 127 46.5
PSO210G4218 Papaver somniferum HOM05D001257 ORTHO05D009836 2.3e-20 102.8 127 43.3
Ca_14519_v3 Cicer arietinum L. HOM05D001257 ORTHO05D009836 1.5e-19 100.1 128 45.3
MD02G1302300 Malus domestica HOM05D001257 ORTHO05D009836 2.1e-18 96.3 128 43.8
Lj3g0009899 Lotus japonicus HOM05D001257 ORTHO05D009836 2.8e-18 95.9 128 40.6
Psat5g211280 Pisum sativum HOM05D001257 ORTHO05D009836 2.8e-18 95.9 128 42.2
RcHm_v2.0_Chr1g0317901 Rosa chinensis HOM05D001257 ORTHO05D009836 3.6e-18 95.5 127 43.3
Manes.10G136500 Manihot esculenta HOM05D001257 ORTHO05D009836 8.1e-18 94.4 127 41.7
FAN03G2091 Fragaria x ananassa HOM05D001257 ORTHO05D009836 1.1e-17 94.0 127 41.7
Phvul.005G023100 Phaseolus vulgaris HOM05D001257 ORTHO05D009836 5.2e-17 91.7 104 45.2
ATR0626G230 Amborella trichopoda HOM05D001257 ORTHO05D009836 6.8e-17 91.3 128 43.8
FvH4_7g01630 Fragaria vesca HOM05D001257 ORTHO05D009836 6.8e-17 91.3 127 41.7
FAN06G0887 Fragaria x ananassa HOM05D001257 ORTHO05D009836 6.8e-17 91.3 127 41.7
FAN10G1834 Fragaria x ananassa HOM05D001257 ORTHO05D009836 8.9e-17 90.9 127 40.2
CDE09G1260 Ceratophyllum demersum HOM05D001257 ORTHO05D009836 4.4e-16 88.6 128 42.2
Sabra09G0041900 Salix brachista HOM05D001257 ORTHO05D009836 1.7e-15 86.7 127 42.5
CDE08G1166 Ceratophyllum demersum HOM05D001257 ORTHO05D009836 3.2e-14 82.4 129 40.3
QL04p034691 Quercus lobata HOM05D001257 ORTHO05D009836 3.5e-13 79.0 143 35.0
VMungo0647G0947 Vigna mungo HOM05D001257 ORTHO05D009836 6.6e-12 74.7 85 43.5
CDE08G0968 Ceratophyllum demersum HOM05D001257 ORTHO05D009836 1.1e-11 73.9 81 50.6
Pp3c1_36560 Physcomitrium patens HOM05D001257 ORTHO05D005285 5.2e-09 65.1 103 35.9
Mapoly0214s0004 Marchantia polymorpha HOM05D001257 ORTHO05D005285 1.5e-08 63.5 81 43.2
Pp3c1_36580 Physcomitrium patens HOM05D001257 ORTHO05D005285 2.6e-08 62.8 104 34.6
MCO07G342 Micromonas commoda HOM05D001257 ORTHO05D005285 4.9e-07 58.5 103 32.0
AagrBONN_evm.TU.Sc2ySwM_344.773 Anthoceros agrestis HOM05D001257 ORTHO05D005285 8.4e-07 57.8 107 31.8
Aqoxy2G00149 Aquilegia oxysepala HOM05D001257 ORTHO05D009836 1.1e-06 57.4 76 39.5
Duzib128G0739 Durio zibethinus HOM05D001257 ORTHO05D005285 1.1e-06 57.4 130 33.1
Pp3c2_5110 Physcomitrium patens HOM05D001257 ORTHO05D005285 1.1e-06 57.4 103 33.0
Os03g0271100 Oryza sativa ssp. japonica HOM05D001257 ORTHO05D005285 1.9e-06 56.6 131 32.8
PRCOL_00006281 Prasinoderma coloniale HOM05D001257 ORTHO05D005665 1.9e-06 56.6 111 35.1
Pp3c14_4440 Physcomitrium patens HOM05D001257 ORTHO05D005665 2.4e-06 56.2 103 35.9
Pp3c14_22330 Physcomitrium patens HOM05D001257 ORTHO05D005285 4.2e-06 55.5 81 38.3
Pp3c14_22334 Physcomitrium patens HOM05D001257 ORTHO05D005285 4.2e-06 55.5 81 38.3
CBR_g4446 Chara braunii HOM05D001257 ORTHO05D005285 5.4e-06 55.1 131 29.0
Medtr3g033150 Medicago truncatula HOM05D001257 ORTHO05D009836 5.4e-06 55.1 77 42.9
Cre03.g194950 Chlamydomonas reinhardtii HOM05D001257 ORTHO05D005285 9.2e-06 54.3 102 31.4


User provided reference genes

Program Settings