Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2046 Capsella rubella HOM05D006496 ORTHO05D008390 1.0e-171 606.7 308 100.0
AT5G59800 Arabidopsis thaliana HOM05D006496 ORTHO05D008390 5.6e-130 468.0 308 77.6
AL8G36350 Arabidopsis lyrata HOM05D006496 ORTHO05D008390 2.3e-128 462.6 310 78.1
CARHR273380 Cardamine hirsuta HOM05D006496 ORTHO05D008390 3.1e-120 435.6 313 74.4
Sp6g21470 Schrenkiella parvula HOM05D006496 ORTHO05D008390 1.1e-112 410.6 322 68.0
Thhalv10014093m.g Eutrema salsugineum HOM05D006496 ORTHO05D008390 1.7e-110 403.3 328 64.6
BolC9t58098H Brassica oleracea HOM05D006496 ORTHO05D008390 5.6e-98 361.7 294 65.3
BcaC04g19631 Brassica carinata HOM05D006496 ORTHO05D008390 9.6e-98 360.9 317 63.4
BraA10t43786Z Brassica rapa HOM05D006496 ORTHO05D008390 1.6e-97 360.1 317 62.8
C09p52290 Brassica napus HOM05D006496 ORTHO05D008390 2.1e-97 359.8 295 65.4
BcaB08g36218 Brassica carinata HOM05D006496 ORTHO05D008390 2.8e-97 359.4 317 60.9
A10p17060 Brassica napus HOM05D006496 ORTHO05D008390 1.4e-96 357.1 317 63.4
BcaC01g06549 Brassica carinata HOM05D006496 ORTHO05D008390 3.6e-68 262.7 215 64.7
BolC3t13791H Brassica oleracea HOM05D006496 ORTHO05D008390 3.6e-68 262.7 198 67.7
BraA03t10462Z Brassica rapa HOM05D006496 ORTHO05D008390 4.7e-68 262.3 314 52.5
C03p13280 Brassica napus HOM05D006496 ORTHO05D008390 1.8e-67 260.4 230 60.9
A03p11480 Brassica napus HOM05D006496 ORTHO05D008390 5.1e-67 258.8 312 51.9
Aa31sc23G160 Aethionema arabicum HOM05D006496 ORTHO05D008390 3.3e-66 256.1 309 49.2
THA.LOC104810806 Tarenaya hassleriana HOM05D006496 ORTHO05D008390 3.8e-46 189.5 321 41.7
FAN11G2800 Fragaria x ananassa HOM05D006496 ORTHO05D008390 9.8e-34 148.3 223 40.8
MD03G1099500 Malus domestica HOM05D006496 ORTHO05D008390 4.9e-33 146.0 232 41.8
RcHm_v2.0_Chr5g0062921 Rosa chinensis HOM05D006496 ORTHO05D008390 1.4e-32 144.4 252 37.3
RcHm_v2.0_Chr5g0062931 Rosa chinensis HOM05D006496 ORTHO05D008390 1.8e-32 144.1 239 38.5
FvH4_3g35002 Fragaria vesca HOM05D006496 ORTHO05D008390 9.2e-32 141.7 255 36.5
Ciclev10028859m.g Citrus clementina HOM05D006496 ORTHO05D008390 1.2e-31 141.4 253 36.4
FAN25G3002 Fragaria x ananassa HOM05D006496 ORTHO05D008390 1.2e-31 141.4 253 38.3
MD11G1113700 Malus domestica HOM05D006496 ORTHO05D008390 1.2e-31 141.4 247 40.9
MD03G1099400 Malus domestica HOM05D006496 ORTHO05D008390 1.5e-29 134.4 242 37.6
TWI75G0988 Tripterygium wilfordii HOM05D006496 ORTHO05D008390 3.3e-29 133.3 206 39.8
Rhsim13G0086700 Rhododendron simsii HOM05D006496 ORTHO05D008390 2.1e-28 130.6 235 35.7
Prupe.6G084300 Prunus persica HOM05D006496 ORTHO05D008390 4.7e-28 129.4 228 39.0
Prupe.6G084200 Prunus persica HOM05D006496 ORTHO05D008390 6.1e-28 129.0 216 40.3
vmacro03111 Vaccinium macrocarpon HOM05D006496 ORTHO05D008390 6.1e-28 129.0 233 33.0
FAN16G2573 Fragaria x ananassa HOM05D006496 ORTHO05D008390 8.0e-28 128.6 279 34.8
Actinidia37238 Actinidia chinensis HOM05D006496 ORTHO05D008390 1.4e-27 127.9 237 37.1
FAN21G2388 Fragaria x ananassa HOM05D006496 ORTHO05D008390 1.8e-27 127.5 279 34.4
QL01p033240 Quercus lobata HOM05D006496 ORTHO05D008390 6.8e-27 125.6 269 32.3
QL01p033291 Quercus lobata HOM05D006496 ORTHO05D008390 6.8e-27 125.6 269 32.3
Lj2A1055T49 Lonicera japonica HOM05D006496 ORTHO05D008390 1.2e-26 124.8 403 26.8
A02p06850 Brassica napus HOM05D006496 ORTHO05D008390 1.5e-26 124.4 149 51.7
C02p12140 Brassica napus HOM05D006496 ORTHO05D008390 1.5e-26 124.4 149 51.7
Hma1.2p1_0035F.1_g022050 Hydrangea macrophylla HOM05D006496 ORTHO05D008390 1.5e-26 124.4 233 34.3
BraA02t05763Z Brassica rapa HOM05D006496 ORTHO05D008390 2.0e-26 124.0 173 49.1
GSVIVG01025031001 Vitis vinifera HOM05D006496 ORTHO05D008390 2.6e-26 123.6 216 34.3
Atru.chr3.3823 Acer truncatum HOM05D006496 ORTHO05D008390 9.8e-26 121.7 247 34.4
Oeu058535.1 Olea europaea HOM05D006496 ORTHO05D008390 9.8e-26 121.7 239 34.7
CSS0000664 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 1.3e-25 121.3 245 35.5
Manes.04G031000 Manihot esculenta HOM05D006496 ORTHO05D008390 3.7e-25 119.8 226 35.0
ECA248G1113 Erigeron canadensis HOM05D006496 ORTHO05D008390 1.4e-24 117.9 399 28.8
CSS0042381 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 5.4e-24 115.9 235 35.3
Sopen11g030740 Solanum pennellii HOM05D006496 ORTHO05D008390 7.0e-24 115.5 251 31.5
SalBow3G1961 Salvia bowleyana HOM05D006496 ORTHO05D008390 1.2e-23 114.8 239 33.9
Actinidia07064 Actinidia chinensis HOM05D006496 ORTHO05D008390 4.6e-23 112.8 205 36.1
CAN.G420.5 Capsicum annuum HOM05D006496 ORTHO05D008390 4.6e-23 112.8 244 30.3
HanXRQChr01g0009851 Helianthus annuus HOM05D006496 ORTHO05D008390 7.8e-23 112.1 235 32.3
Lsat_1_v5_gn_5_167360 Lactuca sativa HOM05D006496 ORTHO05D008390 1.7e-22 110.9 331 27.8
Potri.009G027600 Populus trichocarpa HOM05D006496 ORTHO05D008390 8.6e-22 108.6 214 35.0
Nitab4.5_0003498g0030 Nicotiana tabacum HOM05D006496 ORTHO05D008390 1.1e-21 108.2 216 32.9
Medtr2g096520 Medicago truncatula HOM05D006496 ORTHO05D008390 1.9e-21 107.5 261 30.3
FvH4_3g35010 Fragaria vesca HOM05D006496 ORTHO05D008390 3.3e-21 106.7 265 32.5
TPR.G34315 Trifolium pratense HOM05D006496 ORTHO05D008390 2.1e-20 104.0 138 43.5
Psat5g284080 Pisum sativum HOM05D006496 ORTHO05D008390 2.8e-20 103.6 228 33.8
AUR62001835 Chenopodium quinoa HOM05D006496 ORTHO05D008390 1.1e-19 101.7 283 30.0
HanXRQChr04g0106921 Helianthus annuus HOM05D006496 ORTHO05D008390 1.8e-19 100.9 259 31.3
FAN16G0777 Fragaria x ananassa HOM05D006496 ORTHO05D008390 2.3e-19 100.5 123 44.7
Duzib168G2252 Durio zibethinus HOM05D006496 ORTHO05D008390 6.8e-19 99.0 149 42.3
Migut.D02127 Erythranthe guttata HOM05D006496 ORTHO05D008390 8.9e-19 98.6 251 30.7
FAN11G0827 Fragaria x ananassa HOM05D006496 ORTHO05D008390 8.9e-19 98.6 319 27.6
Lalb_Chr22g0349991 Lupinus albus HOM05D006496 ORTHO05D008390 8.9e-19 98.6 209 34.9
SGA_v2.0_scaffold61G21263 Striga asiatica HOM05D006496 ORTHO05D008390 1.2e-18 98.2 260 28.8
Cc01_g12300 Coffea canephora HOM05D006496 ORTHO05D008390 2.0e-18 97.4 261 26.4
Ah.08g218920 Amaranthus hybridus HOM05D006496 ORTHO05D008390 2.6e-18 97.1 315 30.8
AUR62009623 Chenopodium quinoa HOM05D006496 ORTHO05D008390 4.4e-18 96.3 283 29.3
Lsat_1_v5_gn_9_22140 Lactuca sativa HOM05D006496 ORTHO05D008390 4.4e-18 96.3 252 28.6
Peaxi162Scf00411g00117 Petunia axillaris HOM05D006496 ORTHO05D008390 4.4e-18 96.3 133 39.8
Sc06g0008220 Simmondsia chinensis HOM05D006496 ORTHO05D008390 7.5e-18 95.5 144 43.1
BcaB05g22585 Brassica carinata HOM05D006496 ORTHO05D008390 1.3e-17 94.7 253 32.4
Nitab4.5_0009215g0030 Nicotiana tabacum HOM05D006496 ORTHO05D008390 3.7e-17 93.2 287 28.6
Hund04996 Selenicereus undatus HOM05D006496 ORTHO05D008390 3.7e-17 93.2 294 31.3
CiPaw.13G099300 Carya illinoinensis HOM05D006496 ORTHO05D008390 4.9e-17 92.8 346 29.8
ECA247G0375 Erigeron canadensis HOM05D006496 ORTHO05D008390 1.1e-16 91.7 312 27.2
COL.COLO4_18451 Corchorus olitorius HOM05D006496 ORTHO05D008390 2.4e-16 90.5 163 40.5
HanXRQChr01g0009831 Helianthus annuus HOM05D006496 ORTHO05D008390 3.2e-16 90.1 250 26.8
FAN21G0875 Fragaria x ananassa HOM05D006496 ORTHO05D008390 2.1e-15 87.4 291 28.9
Solyc11g073080.3 Solanum lycopersicum HOM05D006496 ORTHO05D008390 1.0e-14 85.1 146 37.0
FAN25G1110 Fragaria x ananassa HOM05D006496 ORTHO05D008390 8.6e-14 82.0 259 29.7
PGSC0003DMG400015535 Solanum tuberosum HOM05D006496 ORTHO05D008390 1.5e-13 81.3 148 32.4
DCAR_015607 Daucus carota HOM05D006496 ORTHO05D008390 2.5e-13 80.5 199 28.1
Thecc.09G327500 Theobroma cacao HOM05D006496 ORTHO05D008390 1.6e-12 77.8 123 41.5
Phvul.004G007200 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 2.1e-12 77.4 205 32.2
Cpa.g.sc190.31 Carica papaya HOM05D006496 ORTHO05D008390 8.1e-12 75.5 221 31.2
ATR0680G240 Amborella trichopoda HOM05D003520 ORTHO05D003332 4.0e-11 73.2 287 26.8
Glyma.07G118700 Glycine max HOM05D006496 ORTHO05D008390 4.0e-11 73.2 218 31.2
Sabra09G0018800 Salix brachista HOM05D006496 ORTHO05D008390 5.2e-11 72.8 138 34.1
Lj3g0009171 Lotus japonicus HOM05D006496 ORTHO05D008390 2.0e-10 70.9 187 33.7
QL01p033212 Quercus lobata HOM05D006496 ORTHO05D008390 3.4e-10 70.1 99 38.4
VMungo1080G1046 Vigna mungo HOM05D006496 ORTHO05D008390 1.7e-09 67.8 210 29.5
Glyma.13G333300 Glycine max HOM05D006496 ORTHO05D008390 2.9e-09 67.0 287 24.0
Psat5g284120 Pisum sativum HOM05D006496 ORTHO05D008390 2.9e-09 67.0 225 29.3
MD11G1107500 Malus domestica HOM05D004190 ORTHO05D004692 3.7e-09 66.6 127 33.1
Manes.01G173632 Manihot esculenta HOM05D004190 ORTHO05D004692 3.7e-09 66.6 124 33.9
MD01G1199300 Malus domestica HOM05D003520 ORTHO05D003332 8.3e-09 65.5 118 38.1
DCAR_008413 Daucus carota HOM05D003520 ORTHO05D003332 3.2e-08 63.5 148 31.1
EL10Ac7g15965 Beta vulgaris HOM05D006496 ORTHO05D008390 5.4e-08 62.8 225 27.6
Medtr4g008590 Medicago truncatula HOM05D006496 ORTHO05D008390 5.4e-08 62.8 60 46.7
Ca_01342_v3 Cicer arietinum L. HOM05D006496 ORTHO05D008390 7.1e-08 62.4 122 29.5
DCAR_018892 Daucus carota HOM05D006496 ORTHO05D008390 7.1e-08 62.4 256 25.8
Dinv06145 Davidia involucrata HOM05D006496 ORTHO05D008390 1.2e-07 61.6 146 32.2
Sp6g21060 Schrenkiella parvula HOM05D004190 ORTHO05D004692 1.6e-07 61.2 142 32.4
Migut.F00353 Erythranthe guttata HOM05D003520 ORTHO05D003332 2.1e-07 60.8 112 38.4
Potri.009G031100 Populus trichocarpa HOM05D004190 ORTHO05D004692 2.1e-07 60.8 165 30.3
Potri.015G140100 Populus trichocarpa HOM05D003520 ORTHO05D003332 2.7e-07 60.5 111 37.8
Solyc11g068740.2 Solanum lycopersicum HOM05D004190 ORTHO05D004692 2.7e-07 60.5 137 30.7
Sopen11g027450 Solanum pennellii HOM05D004190 ORTHO05D004692 2.7e-07 60.5 137 30.7
VMungo0464G2068 Vigna mungo HOM05D006496 ORTHO05D008390 2.7e-07 60.5 56 51.8
Duzib150G1353 Durio zibethinus HOM05D004190 ORTHO05D004692 3.5e-07 60.1 132 28.8
PGSC0003DMG400026344 Solanum tuberosum HOM05D004190 ORTHO05D004692 3.5e-07 60.1 134 30.6
BraA10t43742Z Brassica rapa HOM05D000173 ORTHO05D000316 4.6e-07 59.7 137 32.1
Gorai.009G099200 Gossypium raimondii HOM05D004190 ORTHO05D004692 4.6e-07 59.7 137 30.7
Phvul.L002943 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 4.6e-07 59.7 229 27.1
AL8G35820 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 6.0e-07 59.3 142 31.0
COL.COLO4_34422 Corchorus olitorius HOM05D003520 ORTHO05D003332 6.0e-07 59.3 186 28.0
Sed0005114 Sechium edule HOM05D003520 ORTHO05D003332 6.0e-07 59.3 118 35.6
C02p12490 Brassica napus HOM05D000173 ORTHO05D000316 1.0e-06 58.5 143 32.2
MD07G1267200 Malus domestica HOM05D003520 ORTHO05D003332 1.0e-06 58.5 127 37.8
Hund11497 Selenicereus undatus HOM05D003520 ORTHO05D003332 1.0e-06 58.5 126 34.1
TPR.G34303 Trifolium pratense HOM05D006496 ORTHO05D008390 1.0e-06 58.5 81 43.2
TWI14G1277 Tripterygium wilfordii HOM05D003520 ORTHO05D003332 1.0e-06 58.5 122 36.1
BraA03t10485Z Brassica rapa HOM05D004190 ORTHO05D004692 1.3e-06 58.2 138 31.9
CARHR285750 Cardamine hirsuta HOM05D004190 ORTHO05D004692 1.3e-06 58.2 141 31.9
Gohir.A05G095600 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.3e-06 58.2 138 30.4
Lj3g0006193 Lotus japonicus HOM05D006496 ORTHO05D008390 1.3e-06 58.2 63 44.4
Prupe.6G084500 Prunus persica HOM05D006496 ORTHO05D008390 1.3e-06 58.2 82 46.3
THA.LOC104814877 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 1.3e-06 58.2 134 32.8
arahy.Tifrunner.gnm1.ann1.7PT1R0 Arachis hypogaea HOM05D006496 ORTHO05D008390 1.7e-06 57.8 85 36.5
BcaC03g14013 Brassica carinata HOM05D004190 ORTHO05D004692 1.7e-06 57.8 143 31.5
BolC2t07349H Brassica oleracea HOM05D004190 ORTHO05D004692 1.7e-06 57.8 143 31.5
Thhalv10014530m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 1.7e-06 57.8 132 31.8
Gohir.D05G095900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.7e-06 57.8 137 29.9
arahy.Tifrunner.gnm1.ann1.4RYS79 Arachis hypogaea HOM05D006496 ORTHO05D008390 2.3e-06 57.4 100 32.0
Phvul.004G006200 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 3.0e-06 57.0 47 55.3
COL.COLO4_18512 Corchorus olitorius HOM05D004190 ORTHO05D004692 3.9e-06 56.6 135 28.1
AT5G59380 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 5.1e-06 56.2 158 31.0
BcaB01g04586 Brassica carinata HOM05D004190 ORTHO05D004692 5.1e-06 56.2 140 30.0
Cfa012135 Carpinus fangiana HOM05D003520 ORTHO05D003332 5.1e-06 56.2 202 30.2
Carub.0008s2005 Capsella rubella HOM05D004190 ORTHO05D004692 6.6e-06 55.8 141 31.9
RcHm_v2.0_Chr7g0198661 Rosa chinensis HOM05D003520 ORTHO05D003332 6.6e-06 55.8 139 34.5
BcaC01g06528 Brassica carinata HOM05D004190 ORTHO05D004692 8.6e-06 55.5 144 30.6
PGSC0003DMG400014327 Solanum tuberosum HOM05D012625 ORTHO05D003332 8.6e-06 55.5 117 33.3
Thecc.09G321100 Theobroma cacao HOM05D004190 ORTHO05D004692 8.6e-06 55.5 130 29.2
TWI79G1380 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 8.6e-06 55.5 130 30.0


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