Gene: C09p52290
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C09p52290
- Transcript Identifier C09p52290
- Gene Type Coding gene
- Location C09 : 51462317-51467292 : negative
Gene Family Information
- ID HOM05D006496
- #Genes/#Species 123/68
- Phylogenetic origin
- ID ORTHO05D008390
- #Genes/#Species 120/68
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C09p52290.1_BnaDAR
- single_cell_id C09p52290.1-BnaDAR
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080167 | ISO | PLAZA Tree-based Orthology | response to karrikin | AT5G59800 |
| GO:1901537 | ISO | PLAZA Tree-based Orthology | positive regulation of DNA demethylation | AT5G59800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0051747 | ISO | PLAZA Tree-based Orthology | cytosine C-5 DNA demethylase activity | AT5G59800 |
| GO:0008327 | ISO | PLAZA Tree-based Orthology | methyl-CpG binding | AT5G59800 |
| GO:0019899 | ISO | PLAZA Tree-based Orthology | enzyme binding | AT5G59800 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Tree-based Orthology | nucleus | AT5G59800 |
| GO:0010369 | ISO | PLAZA Tree-based Orthology | chromocenter | AT5G59800 |
| GO:0005730 | ISO | PLAZA Tree-based Orthology | nucleolus | AT5G59800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.3.2.1 | Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex.methylation reader component MBD7 |