Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.0e-204 716.5 354 100.0
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 5.4e-169 597.8 369 83.7
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 2.0e-123 446.4 259 85.3
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 3.5e-120 435.6 352 63.9
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 1.0e-119 434.1 352 63.1
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 2.6e-115 419.5 352 63.1
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 5.5e-113 411.8 368 59.0
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 2.1e-112 409.8 368 58.7
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 2.7e-112 409.5 352 60.2
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 9.6e-110 401.0 351 59.0
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 1.3e-109 400.6 352 58.5
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 2.1e-109 399.8 352 58.0
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 4.0e-108 395.6 352 57.4
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 6.9e-108 394.8 352 57.7
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 1.2e-107 394.0 362 57.7
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 1.2e-107 394.0 352 58.0
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 2.0e-107 393.3 351 57.5
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 2.6e-107 392.9 353 59.2
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.4e-107 392.5 352 57.1
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 5.8e-107 391.7 337 59.3
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 5.8e-107 391.7 352 56.8
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 7.6e-107 391.3 352 56.8
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 2.2e-106 389.8 352 58.2
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 2.9e-106 389.4 352 57.4
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 6.5e-106 388.3 364 55.2
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 1.2e-104 384.0 351 55.3
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 2.7e-104 382.9 352 56.8
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 4.6e-104 382.1 352 54.8
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 6.0e-104 381.7 352 56.8
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 7.9e-104 381.3 352 56.2
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 2.3e-103 379.8 364 54.4
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 2.3e-103 379.8 352 56.5
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 3.0e-103 379.4 351 57.0
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 3.0e-103 379.4 362 55.0
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 1.1e-102 377.5 352 55.7
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 3.3e-102 375.9 351 56.1
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 9.7e-102 374.4 362 54.4
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 1.3e-101 374.0 339 57.2
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 2.2e-101 373.2 362 53.6
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 2.2e-101 373.2 350 55.7
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 4.8e-101 372.1 360 54.2
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 6.3e-101 371.7 351 55.8
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 1.1e-100 370.9 350 55.7
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 3.1e-100 369.4 338 54.1
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 9.0e-100 367.9 339 56.9
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 2.6e-99 366.3 349 55.3
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 2.6e-99 366.3 349 55.3
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 2.6e-99 366.3 349 55.3
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 2.6e-99 366.3 353 53.5
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 2.6e-99 366.3 356 54.8
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 3.4e-99 365.9 362 52.8
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 3.4e-99 365.9 352 53.7
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 4.5e-99 365.5 352 54.5
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 5.9e-99 365.2 360 53.9
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 5.9e-99 365.2 338 53.6
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 7.6e-99 364.8 357 54.6
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 7.6e-99 364.8 349 54.7
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 7.6e-99 364.8 349 54.7
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 2.2e-98 363.2 356 54.8
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 6.5e-98 361.7 339 54.9
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 8.5e-98 361.3 351 51.6
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 1.1e-97 360.9 350 52.9
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 2.5e-97 359.8 364 50.3
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 5.5e-97 358.6 339 54.6
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 3.6e-96 355.9 419 48.4
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 1.0e-95 354.4 383 50.7
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 2.3e-95 353.2 399 48.4
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 3.9e-95 352.4 339 53.7
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 5.1e-95 352.1 323 54.5
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 2.5e-94 349.7 339 53.4
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 2.2e-93 346.7 360 50.0
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 4.8e-93 345.5 352 50.9
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 1.1e-92 344.4 323 55.7
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 5.3e-92 342.0 362 49.4
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 5.9e-91 338.6 315 56.5
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 2.2e-90 336.7 353 51.8
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 2.9e-90 336.3 343 50.1
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 6.5e-90 335.1 336 54.5
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 8.5e-90 334.7 345 50.4
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 2.5e-89 333.2 332 50.6
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 9.4e-89 331.3 378 47.6
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 1.7e-85 320.5 372 48.1
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 1.5e-78 297.4 290 55.5
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 4.4e-78 295.8 275 56.0
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 2.8e-77 293.1 275 56.0
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.6e-75 286.6 322 48.8
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 1.2e-72 277.7 343 40.2
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 2.0e-70 270.4 285 50.5
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 5.3e-68 262.3 325 42.8
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 2.0e-62 243.8 313 39.9
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 1.7e-58 230.7 278 47.5
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 4.0e-55 219.5 304 39.1
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 2.8e-53 213.4 172 62.8
Lj6A637T63 Lonicera japonica HOM05D004511 ORTHO05D005348 3.7e-53 213.0 222 51.4
vmacro08562 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 1.2e-51 208.0 205 53.7
CDE08G1197 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 4.3e-49 199.5 184 54.3
VMungo0720G0419 Vigna mungo HOM05D004511 ORTHO05D005348 6.8e-47 192.2 149 65.8
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 1.2e-46 191.4 132 69.7
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 2.0e-46 190.7 141 61.7
CSS0022858 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 3.0e-42 176.8 185 50.3
CSS0015875 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 4.3e-41 172.9 185 49.2
CAN.G524.10 Capsicum annuum HOM05D004511 ORTHO05D005348 1.6e-40 171.0 181 51.4
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 3.6e-40 169.9 119 64.7
Hund00489 Selenicereus undatus HOM05D004511 ORTHO05D005348 5.8e-38 162.5 199 44.7
SHI00812 Sapria himalayana HOM05D004511 ORTHO05D005348 2.1e-35 154.1 177 46.3
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 5.1e-34 149.4 101 68.3
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 4.3e-33 146.4 99 68.7
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 2.8e-32 143.7 109 66.1
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 8.1e-32 142.1 106 66.0
Manes.03G157900 Manihot esculenta HOM05D004511 ORTHO05D005348 4.0e-31 139.8 98 67.3
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 1.2e-30 138.3 107 64.5
Ca_04703_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 2.2e-29 134.0 72 97.2
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 8.3e-29 132.1 124 56.5
Hund00476 Selenicereus undatus HOM05D004511 ORTHO05D005348 1.9e-28 131.0 98 63.3
CBR_g22304 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-25 121.7 202 34.2
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 9.5e-25 118.6 56 100.0
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 1.2e-22 111.7 307 28.0
CSS0045058 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.0e-22 110.9 65 81.5
vmacro08561 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 2.6e-22 110.5 66 80.3
CSS0023992 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 5.8e-22 109.4 65 81.5
Lj6A637T62 Lonicera japonica HOM05D004511 ORTHO05D005348 4.2e-20 103.2 56 83.9
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 4.6e-19 99.8 359 27.0
TPR.G7054 Trifolium pratense HOM05D004511 ORTHO05D005348 4.6e-19 99.8 60 81.7
CSS0010114 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 3.6e-16 90.1 68 58.8
CSS0021105 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 3.6e-16 90.1 68 58.8
CDE08G1007 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 1.4e-12 78.2 40 87.5
Cpa.g.c32688 Carica papaya HOM05D004511 ORTHO05D005348 7.1e-12 75.9 40 80.0
Sopen09g033860 Solanum pennellii HOM05D004511 ORTHO05D005348 2.5e-09 67.4 68 52.9
Atru.chr4.2015 Acer truncatum HOM05D004511 ORTHO05D005348 4.3e-09 66.6 126 33.3
Cre06.g250850 Chlamydomonas reinhardtii HOM05D004511 ORTHO05D005348 1.3e-08 65.1 199 31.2
Ca_21499_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.4e-07 61.6 29 89.7
Solyc09g090890.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 4.0e-07 60.1 35 74.3
ATR0787G159 Amborella trichopoda HOM05D004511 ORTHO05D005348 3.4e-06 57.0 42 57.1


User provided reference genes

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