Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 5.6e-147 524.2 264 100.0
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 3.9e-108 395.2 253 81.0
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 4.8e-106 388.3 251 78.9
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 2.7e-101 372.5 254 74.8
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 9.7e-99 364.0 246 77.2
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 1.7e-98 363.2 246 75.6
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 7.7e-96 354.4 244 72.1
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 1.0e-95 354.0 254 71.3
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.3e-95 353.6 244 71.7
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 8.5e-95 350.9 254 70.5
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.5e-94 350.1 245 72.2
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.2e-93 347.1 244 70.9
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 4.7e-93 345.1 244 73.8
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 3.0e-92 342.4 202 84.2
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 4.0e-92 342.0 244 70.9
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 1.5e-91 340.1 244 69.7
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 1.5e-91 340.1 244 68.9
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 2.6e-91 339.3 244 69.7
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 2.6e-91 339.3 244 70.5
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 3.4e-91 339.0 244 69.7
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 5.7e-91 338.2 244 69.3
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 5.7e-91 338.2 244 68.4
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 1.7e-90 336.7 244 68.9
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 2.2e-90 336.3 244 69.7
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 4.8e-90 335.1 244 71.3
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 8.3e-90 334.3 244 68.0
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.1e-89 334.0 244 67.6
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.4e-89 333.6 244 68.0
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.8e-89 333.2 244 68.4
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 2.4e-89 332.8 252 65.9
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 5.4e-89 331.6 244 68.0
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 7.0e-89 331.3 244 67.2
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 9.1e-89 330.9 252 68.3
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.2e-88 330.5 244 67.6
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 2.0e-88 329.7 244 66.4
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 2.7e-88 329.3 244 68.0
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 2.7e-88 329.3 244 66.4
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.3e-87 327.0 246 65.9
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 1.3e-87 327.0 244 68.0
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 8.5e-87 324.3 244 64.8
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.9e-86 323.2 244 66.0
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.9e-86 323.2 244 64.3
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 3.2e-86 322.4 252 64.7
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 3.2e-86 322.4 244 66.8
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 4.2e-86 322.0 245 66.9
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 5.5e-86 321.6 244 63.9
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 5.5e-86 321.6 244 63.9
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 7.2e-86 321.2 244 66.0
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 9.4e-86 320.9 244 64.3
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 9.4e-86 320.9 239 68.6
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.2e-85 320.5 244 63.9
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 1.6e-85 320.1 231 71.0
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 3.6e-85 318.9 244 63.9
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 3.6e-85 318.9 244 63.9
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 1.0e-84 317.4 244 66.0
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.0e-84 317.4 241 66.4
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.8e-84 316.6 241 66.4
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 3.0e-84 315.8 244 63.1
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 3.0e-84 315.8 247 65.2
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 4.0e-84 315.5 244 66.0
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.2e-84 315.1 244 66.4
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 2.6e-83 312.8 245 62.9
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 4.4e-83 312.0 244 62.3
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 7.5e-83 311.2 245 62.9
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 7.5e-83 311.2 244 65.6
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 7.5e-83 311.2 253 64.0
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 9.8e-83 310.8 244 65.6
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 9.8e-83 310.8 244 65.6
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 2.2e-82 309.7 243 62.6
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 3.7e-82 308.9 241 64.3
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 1.1e-81 307.4 244 64.3
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.4e-81 306.2 244 64.8
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 4.1e-81 305.4 244 64.3
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.0e-80 303.1 255 62.7
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 4.5e-80 302.0 297 55.9
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 2.3e-79 299.7 232 66.4
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 9.5e-78 294.3 243 62.1
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.1e-77 293.1 248 61.7
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 3.6e-77 292.4 201 71.6
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 4.4e-75 285.4 244 63.9
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 1.3e-74 283.9 246 61.0
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 2.0e-72 276.6 198 68.2
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 7.3e-70 268.1 262 55.0
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.6e-69 266.9 189 69.8
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 8.0e-69 264.6 250 55.6
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 1.2e-64 250.8 195 63.6
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.3e-58 230.7 221 57.0
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.7e-58 230.3 226 54.0
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 3.0e-55 219.5 156 67.3
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 7.8e-48 194.9 245 41.6
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.5e-46 190.7 249 45.4
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 4.0e-44 182.6 186 51.6
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.5e-43 180.6 186 51.1
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.9e-38 163.7 231 42.0
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 3.6e-37 159.5 243 38.7
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 2.4e-36 156.8 230 40.0
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 1.2e-35 154.5 244 41.0
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 3.2e-33 146.4 159 51.6
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.6e-21 107.5 107 49.5
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 3.7e-21 106.3 97 56.7
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.3e-14 82.8 77 61.0
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 1.4e-12 77.8 67 55.2
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 4.1e-12 76.3 46 80.4
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 2.6e-11 73.6 124 37.9
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 2.6e-11 73.6 56 64.3
Zm00001eb114470 Zea mays HOM05D006139 ORTHO05D007681 3.4e-11 73.2 67 55.2
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 7.6e-11 72.0 201 26.4
SEGI_11325 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.1e-09 68.2 65 47.7
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 1.9e-09 67.4 58 55.2
Eucgr.L02132 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.5e-06 57.8 48 62.5


User provided reference genes

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