Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.3e-271 939.1 482 100.0
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 5.9e-219 764.2 478 86.8
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.1e-193 680.2 458 81.0
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 1.3e-162 577.0 458 67.7
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 9.6e-161 570.9 462 67.3
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 2.4e-156 556.2 460 66.5
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 2.1e-144 516.5 462 65.4
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 2.9e-141 506.1 430 67.7
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 1.4e-140 503.8 458 60.5
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 5.3e-135 485.3 453 60.0
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 2.0e-134 483.4 488 58.8
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 4.9e-133 478.8 485 58.1
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 1.1e-132 477.6 484 57.0
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 3.5e-131 472.6 477 58.1
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 6.1e-131 471.9 484 58.7
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 1.0e-130 471.1 482 58.3
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 1.0e-130 471.1 484 56.2
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 1.3e-130 470.7 475 56.0
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 2.3e-130 469.9 458 56.8
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 1.5e-129 467.2 476 55.0
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 1.5e-129 467.2 489 54.8
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 2.5e-129 466.5 482 55.2
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 7.4e-129 464.9 481 58.0
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 9.7e-129 464.5 489 53.8
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 2.2e-128 463.4 456 57.9
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 4.8e-128 462.2 481 55.9
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 6.9e-127 458.4 502 52.4
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 9.0e-127 458.0 502 52.4
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 1.2e-126 457.6 480 54.6
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 7.7e-126 454.9 479 56.2
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 1.3e-125 454.1 478 57.5
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 1.1e-124 451.1 486 54.7
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 2.5e-124 449.9 483 55.7
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 5.5e-124 448.7 482 54.8
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 1.2e-123 447.6 475 54.9
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 1.6e-123 447.2 459 55.1
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 4.6e-123 445.7 499 51.9
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 7.9e-123 444.9 472 55.1
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.3e-122 443.4 480 55.4
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 3.0e-122 443.0 475 53.7
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.9e-122 442.6 480 55.6
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 3.9e-122 442.6 457 55.4
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 5.1e-122 442.2 480 55.2
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 5.1e-122 442.2 507 51.7
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 1.1e-121 441.0 480 55.4
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 2.5e-121 439.9 471 53.7
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 3.3e-121 439.5 488 51.2
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 3.3e-121 439.5 477 50.9
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 4.3e-121 439.1 485 50.5
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 5.7e-121 438.7 460 54.6
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 7.4e-121 438.3 479 53.7
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 9.7e-121 438.0 471 54.6
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 2.2e-120 436.8 490 49.6
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 3.7e-120 436.0 491 50.1
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 3.7e-120 436.0 491 50.1
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 3.7e-120 436.0 467 56.1
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 3.7e-120 436.0 456 54.8
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 4.8e-120 435.6 477 49.7
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 1.4e-119 434.1 482 49.2
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 3.1e-119 433.0 497 52.3
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 4.1e-119 432.6 452 54.4
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 5.3e-119 432.2 478 54.4
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 5.3e-119 432.2 475 50.9
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 6.9e-119 431.8 459 52.5
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 1.2e-118 431.0 475 51.4
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 1.2e-118 431.0 475 51.4
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 1.5e-118 430.6 488 51.8
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 1.5e-118 430.6 494 55.1
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 1.5e-118 430.6 456 54.6
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.0e-118 430.3 459 53.2
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 3.4e-118 429.5 473 52.4
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 5.9e-118 428.7 476 49.6
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 1.0e-117 427.9 483 51.6
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 1.0e-117 427.9 454 54.6
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 2.2e-117 426.8 475 50.7
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 2.2e-117 426.8 475 50.5
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 2.2e-117 426.8 450 54.4
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 2.9e-117 426.4 454 54.4
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 5.5e-116 422.2 476 50.6
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 4.7e-115 419.1 468 52.6
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 1.0e-114 417.9 496 49.4
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 3.9e-114 416.0 482 49.6
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 5.1e-114 415.6 477 51.8
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 6.7e-114 415.2 511 51.5
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 6.7e-114 415.2 484 51.4
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 8.8e-114 414.8 489 50.7
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.1e-113 414.5 513 50.7
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 2.6e-113 413.3 454 52.9
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 5.9e-110 402.1 459 52.3
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 6.5e-109 398.7 455 51.2
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 1.5e-108 397.5 451 55.7
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 3.0e-106 389.8 445 51.2
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 1.7e-101 374.0 452 48.7
Hma1.2p1_0481F.1_g162010 Hydrangea macrophylla HOM05D003939 ORTHO05D005979 2.8e-96 356.7 330 63.9
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 5.9e-94 349.0 447 46.8
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 1.0e-93 348.2 453 45.3
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 5.0e-93 345.9 500 43.2
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 9.4e-92 341.7 446 44.6
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 2.1e-91 340.5 542 41.7
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 2.6e-89 333.6 512 46.1
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 3.1e-87 326.6 434 44.2
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 1.1e-84 318.2 361 51.0
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 4.9e-80 302.8 480 40.6
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 2.4e-79 300.4 318 53.5
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 1.5e-76 291.2 472 40.5
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 1.9e-76 290.8 388 46.4
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 7.0e-71 272.3 441 39.9
CSS0004390 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 3.5e-70 270.0 208 69.7
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 4.6e-70 269.6 453 38.6
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 2.5e-60 237.3 462 34.2
SEGI_32509 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 1.0e-53 215.3 310 42.3
Psat0s5863g0040 Pisum sativum HOM05D003939 ORTHO05D005979 2.5e-52 210.7 255 50.6
CiPaw.03G089700 Carya illinoinensis HOM05D003939 ORTHO05D005979 8.7e-37 159.1 170 60.0
Psat0s9359g0040 Pisum sativum HOM05D003939 ORTHO05D005979 8.4e-32 142.5 188 45.2
HPP92_012255 Vanilla planifolia HOM05D003939 ORTHO05D005979 1.6e-27 128.3 108 60.2
DCAR_026524 Daucus carota HOM05D003939 ORTHO05D005979 2.6e-25 120.9 79 74.7
Cpa.g.sc14.167 Carica papaya HOM05D003939 ORTHO05D005979 1.3e-24 118.6 103 62.1
MELO3C001621.2 Cucumis melo HOM05D003939 ORTHO05D005979 1.9e-20 104.8 78 65.4
MCO01G540 Micromonas commoda HOM05D003939 ORTHO05D005979 5.7e-20 103.2 223 27.4
TPR.G3973 Trifolium pratense HOM05D003939 ORTHO05D005979 6.2e-19 99.8 174 37.9
MELO3C001721.2 Cucumis melo HOM05D003939 ORTHO05D005979 3.0e-13 80.9 61 63.9
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 1.9e-12 78.2 43 81.4
EL10Ac2g03124 Beta vulgaris HOM05D005544 ORTHO05D007303 5.7e-12 76.6 108 43.5
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 5.7e-12 76.6 43 79.1
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 1.6e-11 75.1 79 50.6
TAR629G0495 Trochodendron aralioides HOM05D003939 ORTHO05D005979 1.6e-11 75.1 43 79.1


User provided reference genes

Program Settings