Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 6.8e-221 770.4 401 100.0
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.1e-146 523.9 402 70.4
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 9.4e-146 520.8 402 69.4
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 6.8e-136 488.0 399 65.9
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 2.2e-126 456.4 400 63.0
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 1.7e-123 446.8 414 61.4
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 3.1e-120 436.0 398 60.3
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 1.5e-119 433.7 413 58.8
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 7.5e-119 431.4 391 60.6
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 3.5e-116 422.5 397 58.2
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 4.6e-116 422.2 399 60.7
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 6.6e-115 418.3 399 59.6
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 6.6e-115 418.3 391 59.8
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.2e-113 414.1 344 62.8
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 1.6e-113 413.7 378 59.5
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 1.6e-113 413.7 386 60.4
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 2.1e-113 413.3 386 58.3
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.6e-113 412.5 386 59.6
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 5.2e-112 408.7 338 68.3
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 7.6e-111 404.8 379 58.3
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.7e-110 403.7 396 57.1
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 2.9e-110 402.9 399 57.6
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 3.8e-110 402.5 395 55.7
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 1.1e-109 401.0 382 55.0
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 9.2e-109 397.9 376 58.5
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 9.2e-109 397.9 400 56.8
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 6.0e-108 395.2 386 53.9
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 6.0e-108 395.2 380 55.5
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 6.0e-108 395.2 378 54.8
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 2.3e-107 393.3 389 54.5
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 5.1e-107 392.1 384 58.9
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 8.6e-107 391.3 401 52.6
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 1.1e-106 391.0 401 56.1
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.1e-106 391.0 398 56.5
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 1.1e-106 391.0 377 58.9
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 2.5e-106 389.8 394 56.1
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.5e-106 389.8 384 58.3
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 3.3e-106 389.4 396 57.1
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 3.3e-106 389.4 400 55.8
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 4.3e-106 389.0 401 55.4
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 7.3e-106 388.3 384 53.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 9.6e-106 387.9 393 56.5
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 9.6e-106 387.9 399 55.6
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.6e-105 387.1 397 52.1
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 3.6e-105 386.0 398 52.8
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 1.8e-104 383.6 353 59.8
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 3.1e-104 382.9 384 53.9
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 5.2e-104 382.1 382 56.8
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 2.0e-103 380.2 387 53.0
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 5.8e-103 378.6 383 55.6
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 1.3e-102 377.5 305 64.3
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.7e-102 377.1 393 53.9
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 2.9e-102 376.3 401 54.6
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 1.4e-101 374.0 379 56.5
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 1.9e-101 373.6 387 51.7
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 7.1e-101 371.7 378 55.3
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 1.2e-100 370.9 391 50.6
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 1.6e-100 370.5 399 52.6
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.3e-99 367.5 406 51.5
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.7e-99 367.1 378 55.6
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 3.9e-99 365.9 379 53.8
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.5e-98 364.0 408 52.0
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 7.3e-98 361.7 408 49.5
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.3e-97 360.9 397 52.6
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 1.6e-97 360.5 374 54.0
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 4.8e-97 359.0 397 52.4
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 6.2e-97 358.6 376 54.0
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.1e-96 357.8 383 51.4
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.8e-96 357.1 354 56.8
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.7e-94 350.5 378 51.6
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 8.4e-94 348.2 388 52.1
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.1e-93 347.8 379 53.0
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 2.7e-92 343.2 379 51.5
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.7e-92 343.2 396 49.7
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 4.6e-92 342.4 377 51.5
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 1.0e-91 341.3 377 51.2
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 1.3e-91 340.9 397 52.9
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.5e-90 337.4 380 51.1
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.5e-90 337.4 380 51.1
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 3.3e-90 336.3 401 50.4
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 5.8e-87 325.5 405 47.4
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 5.8e-87 325.5 320 54.4
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 5.8e-87 325.5 382 48.7
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 6.4e-86 322.0 467 44.1
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.4e-85 320.9 396 49.2
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 7.4e-82 308.5 289 57.8
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 3.1e-80 303.1 276 58.0
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 2.5e-77 293.5 572 36.0
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 5.5e-77 292.4 388 47.7
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.2e-70 270.4 338 44.4
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 6.9e-64 248.8 267 51.3
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 5.9e-63 245.7 245 54.3
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.0e-54 218.4 200 61.5
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.4e-53 214.5 225 51.1
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 4.2e-53 213.0 223 53.8
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 4.7e-52 209.5 193 57.5
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.3e-51 207.2 317 38.2
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 3.9e-51 206.5 206 57.3
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 5.2e-51 206.1 200 58.0
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.8e-48 197.6 119 77.3
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 2.4e-48 197.2 325 37.5
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 4.2e-45 186.4 390 34.9
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.9e-37 161.0 186 48.4
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 6.1e-36 156.0 132 62.9
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.6e-34 150.6 248 43.1
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 1.3e-33 148.3 193 46.6
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 6.5e-30 136.0 96 58.3
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.1e-29 135.2 111 63.1
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 4.9e-25 119.8 148 45.3
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 8.9e-11 72.4 110 32.7


User provided reference genes

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