Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037829 Camellia sinensis var. sinensis HOM05D004988 ORTHO05D005845 1.0e-76 290.0 148 100.0
CSS0008695 Camellia sinensis var. sinensis HOM05D004988 ORTHO05D005845 8.2e-55 217.2 151 80.1
CSS0026270 Camellia sinensis var. sinensis HOM05D004988 ORTHO05D005845 5.2e-41 171.4 99 89.9
CSS0035479 Camellia sinensis var. sinensis HOM05D004988 ORTHO05D005845 5.2e-41 171.4 99 89.9
Actinidia35358 Actinidia chinensis HOM05D004988 ORTHO05D005845 6.8e-41 171.0 101 88.1
Dinv40770 Davidia involucrata HOM05D004988 ORTHO05D005845 2.0e-37 159.5 99 81.8
Atru.chr1.2791 Acer truncatum HOM05D004988 ORTHO05D005845 8.6e-36 154.1 99 80.8
GSVIVG01037674001 Vitis vinifera HOM05D004988 ORTHO05D005845 8.6e-36 154.1 99 78.8
Prupe.4G216500 Prunus persica HOM05D004988 ORTHO05D005845 1.1e-35 153.7 127 66.1
Hma1.2p1_0036F.1_g023500 Hydrangea macrophylla HOM05D004988 ORTHO05D005845 1.5e-35 153.3 101 79.2
Hma1.2p1_0036F.1_g023490 Hydrangea macrophylla HOM05D004988 ORTHO05D005845 1.9e-35 152.9 99 80.8
Duzib213G0327 Durio zibethinus HOM05D004988 ORTHO05D005845 3.3e-35 152.1 99 77.8
FAN16G3602 Fragaria x ananassa HOM05D004988 ORTHO05D005845 3.3e-35 152.1 128 64.8
Thecc.07G033400 Theobroma cacao HOM05D004988 ORTHO05D005845 5.6e-35 151.4 101 76.2
FAN21G3129 Fragaria x ananassa HOM05D004988 ORTHO05D005845 7.3e-35 151.0 127 65.4
Cfa020320 Carpinus fangiana HOM05D004988 ORTHO05D005845 1.2e-34 150.2 99 76.8
VMungo0647G1120 Vigna mungo HOM05D004988 ORTHO05D005845 2.8e-34 149.1 99 76.8
RcHm_v2.0_Chr5g0040391 Rosa chinensis HOM05D004988 ORTHO05D005845 4.7e-34 148.3 127 64.6
Aqoxy1G03129 Aquilegia oxysepala HOM05D004988 ORTHO05D005845 6.1e-34 147.9 99 73.7
Ciclev10010304m.g Citrus clementina HOM05D004988 ORTHO05D005845 6.1e-34 147.9 99 77.8
TWI38G0959 Tripterygium wilfordii HOM05D004988 ORTHO05D005845 6.1e-34 147.9 155 53.5
LjContig00272g0019234 Lotus japonicus HOM05D004988 ORTHO05D005845 8.0e-34 147.5 99 75.8
FAN11G0321 Fragaria x ananassa HOM05D004988 ORTHO05D005845 1.0e-33 147.1 129 62.8
Lalb_Chr04g0248341 Lupinus albus HOM05D004988 ORTHO05D005845 1.0e-33 147.1 99 72.7
MD11G1214700 Malus domestica HOM05D004988 ORTHO05D005845 1.0e-33 147.1 99 75.8
TAR626G1959 Trochodendron aralioides HOM05D004988 ORTHO05D005845 1.0e-33 147.1 98 73.5
Nn1g03486 Nelumbo nucifera HOM05D004988 ORTHO05D005845 1.4e-33 146.7 99 73.7
FvH4_3g23000 Fragaria vesca HOM05D004988 ORTHO05D005845 1.8e-33 146.4 127 63.8
Sc16g0005920 Simmondsia chinensis HOM05D004988 ORTHO05D005845 1.8e-33 146.4 99 73.7
CsaV3_3G004590 Cucumis sativus L. HOM05D004988 ORTHO05D005845 4.0e-33 145.2 101 73.3
TPR.G1199 Trifolium pratense HOM05D004988 ORTHO05D005845 4.0e-33 145.2 99 73.7
Migut.M01745 Erythranthe guttata HOM05D004988 ORTHO05D005845 8.9e-33 144.1 99 73.7
Psat2g012000 Pisum sativum HOM05D004988 ORTHO05D005845 8.9e-33 144.1 99 73.7
CANSAT11G0463 Cannabis sativa HOM05D004988 ORTHO05D005845 1.2e-32 143.7 99 75.8
Ca_06330_v3 Cicer arietinum L. HOM05D004988 ORTHO05D005845 1.2e-32 143.7 99 73.7
Ca_30701_v3 Cicer arietinum L. HOM05D004988 ORTHO05D005845 1.2e-32 143.7 99 73.7
Sed0003845 Sechium edule HOM05D004988 ORTHO05D005845 1.2e-32 143.7 129 58.9
Oeu062583.1 Olea europaea HOM05D004988 ORTHO05D005845 2.0e-32 142.9 99 73.7
arahy.Tifrunner.gnm1.ann1.E8M5A0 Arachis hypogaea HOM05D004988 ORTHO05D005845 2.6e-32 142.5 99 72.7
arahy.Tifrunner.gnm1.ann1.ZUJ4QN Arachis hypogaea HOM05D004988 ORTHO05D005845 2.6e-32 142.5 99 72.7
Gohir.D05G372400 Gossypium hirsutum HOM05D004988 ORTHO05D005845 4.4e-32 141.7 101 71.3
Medtr5g093110 Medicago truncatula HOM05D004988 ORTHO05D005845 9.8e-32 140.6 99 73.7
Gohir.A04G013900 Gossypium hirsutum HOM05D004988 ORTHO05D005845 1.3e-31 140.2 101 69.3
Sabra11G0073600 Salix brachista HOM05D004988 ORTHO05D005845 1.3e-31 140.2 101 71.3
Sabra11G0079200 Salix brachista HOM05D004988 ORTHO05D005845 1.3e-31 140.2 101 71.3
Glyma.14G022400 Glycine max HOM05D004988 ORTHO05D005845 1.7e-31 139.8 99 73.7
Eucgr.F00744 Eucalyptus grandis HOM05D004988 ORTHO05D005845 2.9e-31 139.0 99 73.7
HanXRQChr03g0079751 Helianthus annuus HOM05D004988 ORTHO05D005845 3.7e-31 138.7 99 70.7
HanXRQChr03g0079801 Helianthus annuus HOM05D004988 ORTHO05D005845 3.7e-31 138.7 99 70.7
HanXRQChr05g0152621 Helianthus annuus HOM05D004988 ORTHO05D005845 3.7e-31 138.7 99 70.7
Potri.011G089500 Populus trichocarpa HOM05D004988 ORTHO05D005845 6.4e-31 137.9 99 71.7
CARHR096230 Cardamine hirsuta HOM05D004988 ORTHO05D005845 1.4e-30 136.7 99 72.7
FAN25G2375 Fragaria x ananassa HOM05D004988 ORTHO05D005845 1.4e-30 136.7 115 65.2
CiPaw.11G191700 Carya illinoinensis HOM05D004988 ORTHO05D005845 1.9e-30 136.3 99 72.7
ECA240G2090 Erigeron canadensis HOM05D004988 ORTHO05D005845 4.1e-30 135.2 99 68.7
Manes.03G131500 Manihot esculenta HOM05D004988 ORTHO05D005845 7.0e-30 134.4 99 72.7
SGA_v2.0_scaffold36G14386 Striga asiatica HOM05D004988 ORTHO05D005845 7.0e-30 134.4 98 70.4
AL3G34200 Arabidopsis lyrata HOM05D004988 ORTHO05D005845 9.2e-30 134.0 99 71.7
AT3G20475 Arabidopsis thaliana HOM05D004988 ORTHO05D005845 9.2e-30 134.0 99 71.7
Cc05_g13960 Coffea canephora HOM05D004988 ORTHO05D005845 2.0e-29 132.9 101 67.3
THA.LOC104817863 Tarenaya hassleriana HOM05D004988 ORTHO05D005845 2.7e-29 132.5 99 71.7
Thhalv10022259m.g Eutrema salsugineum HOM05D004988 ORTHO05D005845 4.6e-29 131.7 99 69.7
Carub.0003s2042 Capsella rubella HOM05D004988 ORTHO05D005845 7.8e-29 131.0 98 69.4
Sp3g18490 Schrenkiella parvula HOM05D004988 ORTHO05D005845 1.0e-28 130.6 99 68.7
CAN.G1568.1 Capsicum annuum HOM05D004988 ORTHO05D005845 2.3e-28 129.4 99 68.7
PSO541G0855 Papaver somniferum HOM05D004988 ORTHO05D005845 3.9e-28 128.6 111 63.1
Phvul.008G268900 Phaseolus vulgaris HOM05D004988 ORTHO05D005845 5.0e-28 128.3 93 71.0
EL10Ac4g07775 Beta vulgaris HOM05D004988 ORTHO05D005845 8.6e-28 127.5 100 64.0
A05p28340 Brassica napus HOM05D000284 ORTHO05D005845 8.6e-28 127.5 99 66.7
BolC5t33100H Brassica oleracea HOM05D004988 ORTHO05D005845 8.6e-28 127.5 99 66.7
PGR083G2184 Punica granatum HOM05D004988 ORTHO05D005845 5.6e-27 124.8 112 65.2
Sopen10g008290 Solanum pennellii HOM05D004988 ORTHO05D005845 7.3e-27 124.4 99 67.7
C05p43830 Brassica napus HOM05D000284 ORTHO05D005845 2.8e-26 122.5 99 64.6
Aa31LG8G7300 Aethionema arabicum HOM05D004988 ORTHO05D005845 4.7e-26 121.7 91 70.3
Os05g0498300 Oryza sativa ssp. japonica HOM05D004988 ORTHO05D005845 2.3e-25 119.4 99 59.6
vmacro09701 Vaccinium macrocarpon HOM05D004988 ORTHO05D005845 2.2e-23 112.8 70 81.4
unitig_578.g15992 Utricularia gibba HOM05D004988 ORTHO05D005845 6.4e-23 111.3 139 43.9
Haze_09701 Corylus avellana HOM05D004988 ORTHO05D005845 3.2e-22 109.0 99 61.6
FAN25G1441 Fragaria x ananassa HOM05D004988 ORTHO05D005845 9.2e-22 107.5 128 52.3
ClCG10G004940 Citrullus lanatus HOM05D004988 ORTHO05D005845 4.6e-21 105.1 71 76.1
ATR0794G119 Amborella trichopoda HOM05D004988 ORTHO05D005845 6.0e-21 104.8 99 54.5
MELO3C032293.2 Cucumis melo HOM05D004988 ORTHO05D005845 1.3e-20 103.6 101 54.5
Gorai.009G440600 Gossypium raimondii HOM05D004988 ORTHO05D005845 8.6e-20 100.9 101 57.4
BraA05t21720Z Brassica rapa HOM05D004988 ORTHO05D005845 5.2e-17 91.7 71 66.2
BcaNung06350 Brassica carinata HOM05D004988 ORTHO05D005845 7.5e-16 87.8 70 64.3
Lsat_1_v5_gn_9_90520 Lactuca sativa HOM05D004988 ORTHO05D005845 9.9e-16 87.4 99 51.5
MBI18_g22342_MAGBIO Magnolia biondii HOM05D004988 ORTHO05D005845 6.4e-15 84.7 49 79.6
QL08p009451 Quercus lobata HOM05D004988 ORTHO05D005845 1.4e-14 83.6 48 79.2
PGR083G0916 Punica granatum HOM05D004988 ORTHO05D005845 5.4e-14 81.6 72 61.1
TPR.G10855 Trifolium pratense HOM05D004988 ORTHO05D005845 9.2e-14 80.9 48 79.2
MSTRG.6932 Avicennia marina HOM05D004988 ORTHO05D005845 1.2e-13 80.5 50 78.0
Nitab4.5_0007776g0020 Nicotiana tabacum HOM05D004988 ORTHO05D005845 6.0e-13 78.2 50 70.0
RhsimUnG0249000 Rhododendron simsii HOM05D004988 ORTHO05D005845 8.6e-12 74.3 52 78.8
Pp3c2_9530 Physcomitrium patens HOM05D004988 ORTHO05D005845 1.1e-11 73.9 100 40.0
Solyc10g018540.2 Solanum lycopersicum HOM05D004988 ORTHO05D005845 2.5e-11 72.8 48 72.9
AagrBONN_evm.TU.Sc2ySwM_344.3443 Anthoceros agrestis HOM05D004988 ORTHO05D005845 9.5e-11 70.9 129 32.6
QL08p009463 Quercus lobata HOM05D004988 ORTHO05D005845 1.6e-10 70.1 51 74.5
Hund02015 Selenicereus undatus HOM05D004988 ORTHO05D005845 6.2e-10 68.2 52 69.2
Peaxi162Scf00350g00216 Petunia axillaris HOM05D004988 ORTHO05D005845 1.3e-07 60.5 79 46.8
Solyc10g018530.2 Solanum lycopersicum HOM05D004988 ORTHO05D005845 1.9e-06 56.6 53 58.5
AUR62015808 Chenopodium quinoa HOM05D004988 ORTHO05D005845 3.2e-06 55.8 51 58.8
DCAR_009454 Daucus carota HOM05D004988 ORTHO05D005845 3.2e-06 55.8 51 62.7
AUR62020409 Chenopodium quinoa HOM05D004988 ORTHO05D005845 4.2e-06 55.5 51 56.9
SEGI_15895 Sequoiadendron giganteum HOM05D004988 ORTHO05D005845 9.2e-06 54.3 54 48.1


User provided reference genes

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