Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 0.0e+00 1748.4 877 100.0
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 0.0e+00 1275.0 974 69.9
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 0.0e+00 1210.3 950 68.9
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 0.0e+00 1131.3 857 70.9
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 0.0e+00 1107.8 905 66.1
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 0.0e+00 1100.9 909 65.1
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 0.0e+00 1095.1 904 65.5
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 6.0e-312 1073.9 899 64.8
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 5.4e-311 1070.8 905 64.4
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 2.6e-310 1068.5 899 64.8
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 1.0e-309 1066.6 924 63.6
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 2.9e-309 1065.1 905 65.4
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 2.9e-309 1065.1 899 64.6
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 8.6e-309 1063.5 908 63.9
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 1.9e-308 1062.4 908 64.6
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 6.1e-307 1057.4 1002 59.2
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 3.0e-306 1055.0 911 62.9
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 2.2e-304 1048.9 918 62.9
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 6.3e-304 1047.3 913 63.4
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 4.1e-303 1044.6 898 63.9
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 5.0e-301 1037.7 930 62.9
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 1.1e-300 1036.6 915 63.0
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 5.6e-300 1034.2 916 62.8
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 2.9e-296 1021.9 968 59.3
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 4.9e-296 1021.1 928 62.4
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 6.4e-296 1020.8 928 62.4
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 6.4e-296 1020.8 942 62.0
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 3.2e-295 1018.5 934 61.7
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 7.8e-294 1013.8 933 61.6
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 5.0e-293 1011.1 912 62.2
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 5.0e-293 1011.1 894 63.0
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 8.6e-293 1010.4 935 61.6
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 5.6e-292 1007.7 936 61.1
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 2.1e-291 1005.7 899 61.3
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 4.7e-291 1004.6 897 61.9
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 6.2e-291 1004.2 818 67.0
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 2.6e-289 998.8 899 61.3
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 3.4e-289 998.4 904 62.1
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 6.4e-288 994.2 899 60.7
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 1.1e-287 993.4 899 60.5
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 5.4e-287 991.1 916 60.6
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 9.2e-287 990.3 906 61.4
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 1.7e-285 986.1 749 71.0
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 5.1e-285 984.6 909 60.7
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 1.2e-283 979.9 899 60.4
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 6.8e-282 974.2 901 60.3
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 9.2e-279 963.8 912 59.8
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 2.5e-276 955.7 758 69.5
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 1.2e-275 953.4 900 59.2
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 3.6e-275 951.8 750 69.6
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 4.7e-275 951.4 904 59.1
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 5.8e-273 944.5 905 59.6
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 2.9e-272 942.2 902 58.5
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 4.9e-272 941.4 876 59.2
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.4e-271 939.9 914 58.4
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 1.9e-271 939.5 909 59.0
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 3.2e-271 938.7 909 59.0
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 1.3e-269 933.3 897 59.1
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 1.1e-268 930.2 915 58.7
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 1.1e-268 930.2 909 58.5
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 2.5e-268 929.1 807 63.1
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 5.6e-268 927.9 915 58.5
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 5.6e-268 927.9 799 65.0
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 7.3e-268 927.5 969 55.5
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 2.8e-267 925.6 916 58.6
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 8.1e-267 924.1 916 58.4
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 3.1e-266 922.2 806 62.5
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 5.3e-266 921.4 808 62.5
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 1.5e-265 919.8 700 68.7
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 2.6e-265 919.1 806 62.8
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 1.6e-262 909.8 868 58.2
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 3.5e-262 908.7 953 55.5
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 1.7e-261 906.4 899 56.6
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 3.6e-259 898.7 956 55.4
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 4.8e-259 898.3 743 65.1
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 1.1e-258 897.1 716 68.2
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 1.4e-258 896.7 830 60.8
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 5.3e-258 894.8 900 56.6
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 1.5e-257 893.3 892 57.3
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 3.2e-255 885.6 800 60.9
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.2e-254 883.6 809 61.2
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.7e-251 872.1 817 59.6
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 1.1e-250 870.5 776 62.6
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 9.0e-250 867.5 1033 52.4
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 8.7e-245 850.9 897 53.6
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.1e-244 850.5 744 63.3
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 3.9e-237 825.5 966 51.1
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 2.5e-231 806.2 598 71.2
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 3.3e-228 795.8 1059 47.4
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 2.2e-227 793.1 992 47.8
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 9.4e-223 777.7 947 50.3
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 2.2e-219 766.5 730 58.5
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 1.4e-218 763.8 789 54.6
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 2.2e-216 756.5 723 59.6
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 5.3e-210 735.3 711 59.2
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.2e-206 724.2 811 53.6
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 6.1e-206 721.8 1088 44.6
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 1.4e-197 694.1 741 56.4
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 4.9e-195 685.6 709 55.9
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.0e-184 651.4 644 57.3
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 4.1e-178 629.4 623 58.3
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 1.6e-177 627.5 697 52.7
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.7e-169 600.1 602 57.3
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 1.0e-168 598.2 601 57.2
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 1.3e-163 581.3 846 41.8
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 1.2e-145 521.5 716 42.5
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 1.3e-131 474.9 698 42.3
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 7.6e-124 449.1 574 46.3
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 1.7e-99 368.2 425 52.5
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.5e-66 258.1 208 61.5
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 2.3e-59 235.0 216 60.2
CSS0035540 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 1.9e-50 205.3 93 100.0
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.6e-49 202.2 347 34.0
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 1.9e-42 178.7 197 55.3
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 1.5e-39 169.1 317 33.4
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 5.8e-23 114.0 87 66.7
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 2.9e-22 111.7 123 48.8
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 8.4e-22 110.2 277 32.9
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.7e-20 105.1 74 70.3
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-15 89.4 124 43.5
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-13 80.1 309 28.5
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.1e-12 79.0 70 64.3
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 2.8e-09 68.6 41 85.4
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.1e-08 66.6 37 91.9
Hma1.2p1_0053F.1_g030840 Hydrangea macrophylla HOM05D001486 ORTHO05D017058 6.5e-06 57.4 41 68.3


User provided reference genes

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