Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027843 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.5e-212 742.7 399 100.0
CSS0037159 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 8.8e-144 514.2 312 90.4
Rhsim03G0269700 Rhododendron simsii HOM05D007201 ORTHO05D009122 1.6e-140 503.4 404 70.3
CSS0027553 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 5.2e-136 488.4 279 95.3
Actinidia03796 Actinidia chinensis HOM05D007201 ORTHO05D009122 6.8e-136 488.0 411 67.9
vmacro22702 Vaccinium macrocarpon HOM05D007201 ORTHO05D009122 1.7e-110 403.7 508 50.2
Dinv26498 Davidia involucrata HOM05D007201 ORTHO05D009122 4.6e-108 395.6 406 59.6
TAR626G0209 Trochodendron aralioides HOM05D007201 ORTHO05D009122 1.7e-107 393.7 403 54.6
Lju50A20G7 Lonicera japonica HOM05D007201 ORTHO05D009122 3.3e-106 389.4 424 59.2
Haze_21242 Corylus avellana HOM05D007201 ORTHO05D009122 1.4e-101 374.0 405 53.8
Cfa012872 Carpinus fangiana HOM05D007201 ORTHO05D009122 1.0e-99 367.9 410 52.7
Thecc.09G202300 Theobroma cacao HOM05D007201 ORTHO05D009122 3.0e-99 366.3 404 55.2
QL11p005700 Quercus lobata HOM05D007201 ORTHO05D009122 7.3e-98 361.7 407 50.1
CiPaw.15G000100 Carya illinoinensis HOM05D007201 ORTHO05D009122 9.9e-95 351.3 410 52.0
Manes.02G222200 Manihot esculenta HOM05D007201 ORTHO05D009122 1.7e-94 350.5 407 49.6
Prupe.1G000600 Prunus persica HOM05D007201 ORTHO05D009122 4.1e-93 345.9 406 51.5
Ciclev10008517m.g Citrus clementina HOM05D007201 ORTHO05D009122 7.1e-93 345.1 394 51.5
Gorai.012G009900 Gossypium raimondii HOM05D007201 ORTHO05D009122 1.2e-92 344.4 410 52.9
MELO3C010035.2 Cucumis melo HOM05D007201 ORTHO05D009122 1.6e-92 344.0 400 49.5
CsaV3_1G044360 Cucumis sativus L. HOM05D007201 ORTHO05D009122 1.3e-91 340.9 400 49.8
GSVIVG01034266001 Vitis vinifera HOM05D007201 ORTHO05D009122 1.7e-91 340.5 393 55.2
Sabra06G0061200 Salix brachista HOM05D007201 ORTHO05D009122 2.3e-91 340.1 466 48.7
Gohir.D04G008200 Gossypium hirsutum HOM05D007201 ORTHO05D009122 3.0e-91 339.7 407 52.6
RcHm_v2.0_Chr4g0384751 Rosa chinensis HOM05D007201 ORTHO05D009122 5.1e-91 339.0 405 47.7
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 8.6e-91 338.2 396 52.8
Potri.006G081100 Populus trichocarpa HOM05D007201 ORTHO05D009122 8.6e-91 338.2 445 48.8
COL.COLO4_09000 Corchorus olitorius HOM05D007201 ORTHO05D009122 2.5e-90 336.7 414 51.9
Cc06_g23490 Coffea canephora HOM05D007201 ORTHO05D009122 5.6e-90 335.5 438 50.5
FvH4_4g00131 Fragaria vesca HOM05D007201 ORTHO05D009122 2.4e-88 330.1 415 47.2
Atru.chr7.298 Acer truncatum HOM05D007201 ORTHO05D009122 5.2e-88 328.9 398 49.5
Sc10g0006090 Simmondsia chinensis HOM05D007201 ORTHO05D009122 1.2e-87 327.8 402 51.5
MD04G1000600 Malus domestica HOM05D007201 ORTHO05D009122 3.2e-85 319.7 406 50.7
Nn8g41282 Nelumbo nucifera HOM05D007201 ORTHO05D009122 3.5e-84 316.2 401 51.6
PGSC0003DMG400002893 Solanum tuberosum HOM05D007201 ORTHO05D009122 5.1e-83 312.4 443 46.7
Solyc12g009390.2 Solanum lycopersicum HOM05D007201 ORTHO05D009122 8.7e-83 311.6 452 48.2
FAN12G0236 Fragaria x ananassa HOM05D007201 ORTHO05D009122 2.8e-81 306.6 412 45.6
arahy.Tifrunner.gnm1.ann1.X4HTYC Arachis hypogaea HOM05D007201 ORTHO05D009122 1.2e-79 301.2 430 47.4
SGA_v2.0_scaffold21G09583 Striga asiatica HOM05D007201 ORTHO05D009122 7.6e-79 298.5 455 45.3
Hund22525 Selenicereus undatus HOM05D007201 ORTHO05D009122 9.9e-79 298.1 400 48.0
Peaxi162Scf00047g02450 Petunia axillaris HOM05D007201 ORTHO05D009122 2.9e-78 296.6 392 48.7
Sopen12g004380 Solanum pennellii HOM05D007201 ORTHO05D009122 1.4e-77 294.3 440 47.7
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 5.4e-77 292.4 422 46.2
PSO339G5324 Papaver somniferum HOM05D007201 ORTHO05D009122 5.4e-77 292.4 412 49.0
arahy.Tifrunner.gnm1.ann1.G7GJBK Arachis hypogaea HOM05D007201 ORTHO05D009122 1.7e-75 287.3 426 48.8
Eucgr.C00055 Eucalyptus grandis HOM05D007201 ORTHO05D009122 2.1e-73 280.4 413 47.9
HanXRQChr10g0309261 Helianthus annuus HOM05D007201 ORTHO05D009122 9.0e-72 275.0 294 56.1
PGR142G4385 Punica granatum HOM05D007201 ORTHO05D009122 2.6e-71 273.5 405 42.2
Cpa.g.sc46.114 Carica papaya HOM05D007201 ORTHO05D009122 3.4e-71 273.1 422 45.7
Lsat_1_v5_gn_5_80700 Lactuca sativa HOM05D007201 ORTHO05D009122 4.5e-71 272.7 407 44.5
Nitab4.5_0000073g0490 Nicotiana tabacum HOM05D007201 ORTHO05D009122 7.6e-71 271.9 451 46.3
Glyma.12G016400 Glycine max HOM05D007201 ORTHO05D009122 3.2e-69 266.5 409 45.2
CAN.G1591.3 Capsicum annuum HOM05D007201 ORTHO05D009122 5.5e-69 265.8 251 65.3
ECA234G1264 Erigeron canadensis HOM05D007201 ORTHO05D009122 5.5e-69 265.8 422 43.8
Phvul.011G018600 Phaseolus vulgaris HOM05D007201 ORTHO05D009122 1.2e-68 264.6 406 42.4
VMungo1127G0228 Vigna mungo HOM05D007201 ORTHO05D009122 2.7e-68 263.5 419 43.2
Lj3g0009807 Lotus japonicus HOM05D007201 ORTHO05D009122 6.0e-68 262.3 403 44.2
TPR.G28027 Trifolium pratense HOM05D007201 ORTHO05D009122 1.8e-67 260.8 447 43.0
Aqoxy7G02518 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 3.9e-67 259.6 438 40.9
Glyma.11G109000 Glycine max HOM05D007201 ORTHO05D009122 3.9e-67 259.6 410 44.1
EL10Ac2g03602 Beta vulgaris HOM05D007201 ORTHO05D009122 8.7e-67 258.5 473 41.0
Psat7g169960 Pisum sativum HOM05D007201 ORTHO05D009122 9.0e-64 248.4 417 41.2
SHI24431 Sapria himalayana HOM05D007201 ORTHO05D009122 1.3e-62 244.6 268 51.5
Zm00001eb227240 Zea mays HOM05D007201 ORTHO05D009122 1.7e-62 244.2 411 43.8
HPP92_017373 Vanilla planifolia HOM05D007201 ORTHO05D009122 2.2e-62 243.8 407 45.9
Nitab4.5_0004827g0030 Nicotiana tabacum HOM05D007201 ORTHO05D009122 5.5e-61 239.2 347 47.0
Duzib168G1263 Durio zibethinus HOM05D007201 ORTHO05D009122 2.7e-60 236.9 406 44.3
Carub.0002s2218 Capsella rubella HOM05D007201 ORTHO05D009122 3.5e-60 236.5 416 41.6
Medtr4g078160 Medicago truncatula HOM05D007201 ORTHO05D009122 1.0e-59 235.0 431 41.5
FAN12G1512 Fragaria x ananassa HOM05D007201 ORTHO05D009122 3.9e-59 233.0 299 47.2
CANSAT25G2467 Cannabis sativa HOM05D007201 ORTHO05D009122 6.7e-59 232.3 550 33.5
FAN22G0406 Fragaria x ananassa HOM05D007201 ORTHO05D009122 3.3e-58 229.9 415 39.8
Lalb_Chr19g0140031 Lupinus albus HOM05D007201 ORTHO05D009122 2.8e-57 226.9 399 40.6
THA.LOC104809224 Tarenaya hassleriana HOM05D007201 ORTHO05D009122 8.2e-57 225.3 414 39.6
ATR0626G320 Amborella trichopoda HOM05D007201 ORTHO05D009122 3.1e-56 223.4 418 38.8
SEGI_05170 Sequoiadendron giganteum HOM05D007201 ORTHO05D009122 3.4e-55 219.9 432 37.5
Os06g0704300 Oryza sativa ssp. japonica HOM05D007201 ORTHO05D009122 1.4e-53 214.5 407 38.6
Aqoxy37s001 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 5.5e-53 212.6 307 42.3
AL2G35270 Arabidopsis lyrata HOM05D007201 ORTHO05D009122 1.6e-52 211.1 466 35.4
A07p40900 Brassica napus HOM05D007201 ORTHO05D009122 3.5e-52 209.9 425 39.5
Thhalv10018711m.g Eutrema salsugineum HOM05D007201 ORTHO05D009122 4.6e-52 209.5 401 37.2
BraA07t31630Z Brassica rapa HOM05D007201 ORTHO05D009122 1.1e-50 204.9 442 38.0
C06p49330 Brassica napus HOM05D007201 ORTHO05D009122 1.9e-50 204.1 425 38.8
Sp5g30480 Schrenkiella parvula HOM05D007201 ORTHO05D009122 4.8e-49 199.5 462 36.8
CDE04G0352 Ceratophyllum demersum HOM05D007201 ORTHO05D009122 1.4e-48 198.0 369 38.5
AUR62027959 Chenopodium quinoa HOM05D007201 ORTHO05D009122 4.1e-48 196.4 427 38.4
CARHR068690 Cardamine hirsuta HOM05D007201 ORTHO05D009122 6.9e-48 195.7 439 36.0
BcaC08g47362 Brassica carinata HOM05D007201 ORTHO05D009122 2.6e-47 193.7 420 40.5
Aa31LG4G5550 Aethionema arabicum HOM05D007201 ORTHO05D009122 2.2e-46 190.7 432 37.5
AT1G75340 Arabidopsis thaliana HOM05D007201 ORTHO05D009122 3.8e-46 189.9 472 33.7
BolC6t39968H Brassica oleracea HOM05D007201 ORTHO05D009122 4.2e-45 186.4 444 36.3
unitig_8.g3542 Utricularia gibba HOM05D007201 ORTHO05D009122 1.2e-44 184.9 399 36.8
Oeu000954.1 Olea europaea HOM05D007201 ORTHO05D009122 5.5e-37 159.5 252 42.5
CSS0018491 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 7.2e-37 159.1 89 98.9
Migut.L01609 Erythranthe guttata HOM05D007201 ORTHO05D009122 1.4e-35 154.8 393 34.1
Mapoly0005s0044 Marchantia polymorpha HOM05D007201 ORTHO05D009122 2.2e-33 147.5 426 32.2
CSS0038290 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.4e-32 144.8 89 93.3
ClCG03G010480 Citrullus lanatus HOM05D007201 ORTHO05D009122 1.2e-31 141.7 224 45.1
FAN17G0247 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.6e-31 141.4 84 71.4
Pp3c7_12210 Physcomitrium patens HOM05D007201 ORTHO05D009122 2.0e-31 141.0 422 31.8
Gohir.A05G407400 Gossypium hirsutum HOM05D007201 ORTHO05D009122 2.7e-28 130.6 242 40.1
CSS0006520 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 6.7e-27 125.9 62 90.3
CSS0048863 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 6.7e-27 125.9 62 90.3
AagrBONN_evm.TU.Sc2ySwM_117.2509 Anthoceros agrestis HOM05D007201 ORTHO05D009122 3.0e-19 100.5 211 36.5
CBR_g15955 Chara braunii HOM05D007201 ORTHO05D009122 2.6e-18 97.4 204 36.3
CSS0012149 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.0e-11 75.5 89 46.1
CSS0032596 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.0e-11 75.5 89 46.1
Sed0005629 Sechium edule HOM05D007201 ORTHO05D009122 2.7e-07 60.8 101 39.6
Ah.11g043520 Amaranthus hybridus HOM05D000145 ORTHO05D000115 4.5e-07 60.1 275 28.7
arahy.Tifrunner.gnm1.ann1.IV261E Arachis hypogaea HOM05D000013 ORTHO05D000506 1.0e-06 58.9 102 41.2


User provided reference genes

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