Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023482 Camellia sinensis var. sinensis HOM05D007020 ORTHO05D008935 2.0e-124 449.1 227 100.0
vmacro21850 Vaccinium macrocarpon HOM05D007020 ORTHO05D008935 1.1e-61 240.7 246 60.2
Actinidia17018 Actinidia chinensis HOM05D007020 ORTHO05D008935 3.1e-61 239.2 234 60.7
Rhsim06G0012300 Rhododendron simsii HOM05D007020 ORTHO05D008935 1.7e-59 233.4 239 59.8
Dinv31889 Davidia involucrata HOM05D007020 ORTHO05D008935 6.7e-56 221.5 249 55.4
TAR633G1459 Trochodendron aralioides HOM05D007020 ORTHO05D008935 1.4e-53 213.8 233 55.4
TAR376G1009 Trochodendron aralioides HOM05D007020 ORTHO05D008935 4.1e-53 212.2 233 55.4
Nitab4.5_0003030g0130 Nicotiana tabacum HOM05D007020 ORTHO05D008935 2.6e-47 193.0 229 53.7
CiPaw.07G144000 Carya illinoinensis HOM05D007020 ORTHO05D008935 5.7e-47 191.8 253 48.6
GSVIVG01008746001 Vitis vinifera HOM05D007020 ORTHO05D008935 7.4e-47 191.4 240 51.7
Lj4A801T43 Lonicera japonica HOM05D007020 ORTHO05D008935 1.7e-46 190.3 235 54.5
Solyc04g081920.3 Solanum lycopersicum HOM05D007020 ORTHO05D008935 2.8e-46 189.5 245 51.0
Sopen04g035560 Solanum pennellii HOM05D007020 ORTHO05D008935 2.8e-46 189.5 238 52.5
Haze_22697 Corylus avellana HOM05D007020 ORTHO05D008935 1.1e-45 187.6 246 50.4
PGSC0003DMG400009884 Solanum tuberosum HOM05D007020 ORTHO05D008935 1.4e-45 187.2 241 51.5
Carub.0002s2293 Capsella rubella HOM05D007020 ORTHO05D008935 3.1e-45 186.0 227 54.2
Manes.06G014100 Manihot esculenta HOM05D007020 ORTHO05D008935 9.1e-45 184.5 235 50.6
Sp5g31160 Schrenkiella parvula HOM05D007020 ORTHO05D008935 1.2e-44 184.1 224 52.7
Ciclev10001736m.g Citrus clementina HOM05D007020 ORTHO05D008935 2.6e-44 183.0 201 54.7
THA.LOC104809629 Tarenaya hassleriana HOM05D007020 ORTHO05D008935 2.6e-44 183.0 210 54.3
Hma1.2p1_1598F.1_g292900 Hydrangea macrophylla HOM05D007020 ORTHO05D008935 3.5e-44 182.6 238 50.8
arahy.Tifrunner.gnm1.ann1.YGS75T Arachis hypogaea HOM05D007020 ORTHO05D008935 4.5e-44 182.2 231 49.8
Cpa.g.sc26.268 Carica papaya HOM05D007020 ORTHO05D008935 4.5e-44 182.2 235 49.4
Ca_15469_v3 Cicer arietinum L. HOM05D007020 ORTHO05D008935 4.5e-44 182.2 233 51.1
Aa31LG4G6160 Aethionema arabicum HOM05D000059 ORTHO05D000128 5.9e-44 181.8 229 51.1
Cc10_g01170 Coffea canephora HOM05D007020 ORTHO05D008935 5.9e-44 181.8 244 48.8
Cfa014002 Carpinus fangiana HOM05D007020 ORTHO05D008935 1.0e-43 181.0 243 48.6
PGR031G0358 Punica granatum HOM05D007020 ORTHO05D008935 1.0e-43 181.0 183 56.3
QL02p012883 Quercus lobata HOM05D007020 ORTHO05D008935 1.0e-43 181.0 244 48.0
Peaxi162Scf00174g00717 Petunia axillaris HOM05D007020 ORTHO05D008935 1.3e-43 180.6 224 51.3
MSTRG.25275 Avicennia marina HOM05D000001 ORTHO05D009837 2.2e-43 179.9 245 48.2
Sabra02G0013400 Salix brachista HOM05D007020 ORTHO05D008935 2.9e-43 179.5 248 47.6
Duzib093G0969 Durio zibethinus HOM05D007020 ORTHO05D008935 3.8e-43 179.1 207 55.6
arahy.Tifrunner.gnm1.ann1.W20NI2 Arachis hypogaea HOM05D007020 ORTHO05D008935 5.0e-43 178.7 231 48.9
Atru.chr13.224 Acer truncatum HOM05D007020 ORTHO05D008935 6.5e-43 178.3 224 52.7
Medtr3g114540 Medicago truncatula HOM05D007020 ORTHO05D008935 1.1e-42 177.6 251 47.8
Potri.002G016800 Populus trichocarpa HOM05D007020 ORTHO05D008935 1.9e-42 176.8 238 50.0
SalBow7G4579 Salvia bowleyana HOM05D000001 ORTHO05D009837 1.9e-42 176.8 248 46.8
Lj1g0017386 Lotus japonicus HOM05D007020 ORTHO05D008935 3.2e-42 176.0 229 49.3
Gohir.D05G186100 Gossypium hirsutum HOM05D007020 ORTHO05D008935 4.2e-42 175.6 208 53.4
Oeu014023.1 Olea europaea HOM05D007020 ORTHO05D008935 5.5e-42 175.3 296 44.6
Lalb_Chr08g0246281 Lupinus albus HOM05D007020 ORTHO05D008935 7.2e-42 174.9 240 46.2
SGA_v2.0_scaffold96G28944 Striga asiatica HOM05D007020 ORTHO05D008935 9.4e-42 174.5 226 49.6
AT1G76050 Arabidopsis thaliana HOM05D007020 ORTHO05D008935 1.2e-41 174.1 228 50.4
MELO3C011342.2 Cucumis melo HOM05D007020 ORTHO05D008935 2.7e-41 172.9 247 47.8
Gohir.A05G183200 Gossypium hirsutum HOM05D007020 ORTHO05D008935 2.7e-41 172.9 208 52.4
PSO170G4315 Papaver somniferum HOM05D007020 ORTHO05D008935 2.7e-41 172.9 244 48.0
Sed0026116 Sechium edule HOM05D007020 ORTHO05D008935 2.7e-41 172.9 245 48.2
TPR.G38245 Trifolium pratense HOM05D007020 ORTHO05D008935 3.6e-41 172.6 246 47.6
AL2G36070 Arabidopsis lyrata HOM05D007020 ORTHO05D008935 4.7e-41 172.2 226 50.4
CARHR069580 Cardamine hirsuta HOM05D007020 ORTHO05D008935 4.7e-41 172.2 228 51.3
Gorai.009G191500 Gossypium raimondii HOM05D000059 ORTHO05D008935 4.7e-41 172.2 178 57.3
Psat5g012400 Pisum sativum HOM05D007020 ORTHO05D008935 4.7e-41 172.2 239 47.7
TWI36G0910 Tripterygium wilfordii HOM05D007020 ORTHO05D008935 6.1e-41 171.8 230 49.6
Thecc.08G051000 Theobroma cacao HOM05D007020 ORTHO05D008935 1.0e-40 171.0 232 50.9
Glyma.04G020900 Glycine max HOM05D007020 ORTHO05D008935 1.4e-40 170.6 185 53.5
CAN.G311.66 Capsicum annuum HOM05D007020 ORTHO05D008935 1.8e-40 170.2 192 53.1
Eucgr.F03712 Eucalyptus grandis HOM05D007020 ORTHO05D008935 2.3e-40 169.9 183 54.6
DCAR_022941 Daucus carota HOM05D007020 ORTHO05D008935 3.0e-40 169.5 198 51.0
Migut.C00895 Erythranthe guttata HOM05D007020 ORTHO05D008935 3.0e-40 169.5 234 48.7
Thhalv10018588m.g Eutrema salsugineum HOM05D007020 ORTHO05D008935 3.0e-40 169.5 208 51.9
Phvul.009G019500 Phaseolus vulgaris HOM05D007020 ORTHO05D008935 4.0e-40 169.1 247 46.6
Sc26g0004460 Simmondsia chinensis HOM05D007020 ORTHO05D008935 4.0e-40 169.1 228 47.8
ClCG08G014040 Citrullus lanatus HOM05D007020 ORTHO05D008935 6.7e-40 168.3 247 45.7
Zm00001eb272250 Zea mays HOM05D007020 ORTHO05D008935 8.8e-40 167.9 224 46.0
CsaV3_2G024410 Cucumis sativus L. HOM05D007020 ORTHO05D008935 1.5e-39 167.2 247 46.2
Os06g0717400 Oryza sativa ssp. japonica HOM05D007020 ORTHO05D008935 5.7e-39 165.2 225 44.9
BcaC08g47097 Brassica carinata HOM05D007020 ORTHO05D008935 7.5e-39 164.9 228 47.8
CDE02G2299 Ceratophyllum demersum HOM05D000059 ORTHO05D008935 7.5e-39 164.9 181 56.4
Aqoxy6G02012 Aquilegia oxysepala HOM05D007020 ORTHO05D008935 6.3e-38 161.8 175 54.9
BcaC08g47303 Brassica carinata HOM05D007020 ORTHO05D008935 6.3e-38 161.8 236 44.1
ECA232G4433 Erigeron canadensis HOM05D007020 ORTHO05D008935 6.3e-38 161.8 235 47.2
HanXRQChr05g0146601 Helianthus annuus HOM05D007020 ORTHO05D008935 6.3e-38 161.8 231 46.3
Lsat_1_v5_gn_0_761 Lactuca sativa HOM05D007020 ORTHO05D008935 1.1e-37 161.0 170 55.9
ATR0661G229 Amborella trichopoda HOM05D007020 ORTHO05D008935 3.1e-37 159.5 233 46.4
A07p41540 Brassica napus HOM05D007020 ORTHO05D008935 7.7e-36 154.8 227 44.9
Ah.11g040270 Amaranthus hybridus HOM05D007020 ORTHO05D008935 1.3e-35 154.1 206 44.7
BraA07t31686Z Brassica rapa HOM05D007020 ORTHO05D008935 2.2e-35 153.3 227 44.5
BolC6t40035H Brassica oleracea HOM05D007020 ORTHO05D008935 3.8e-35 152.5 234 43.6
VMungo1309G1583 Vigna mungo HOM05D007020 ORTHO05D008935 6.5e-35 151.8 282 40.8
C06p49960 Brassica napus HOM05D007020 ORTHO05D008935 1.1e-34 151.0 261 41.0
COL.COLO4_26091 Corchorus olitorius HOM05D007020 ORTHO05D008935 1.5e-34 150.6 207 47.8
SEGI_18542 Sequoiadendron giganteum HOM05D007020 ORTHO05D008935 1.5e-34 150.6 176 50.0
EL10Ac1g02092 Beta vulgaris HOM05D007020 ORTHO05D008935 5.5e-34 148.7 234 43.6
AUR62013887 Chenopodium quinoa HOM05D007020 ORTHO05D008935 3.6e-33 146.0 229 42.4
Hund05155 Selenicereus undatus HOM05D007020 ORTHO05D008935 8.0e-33 144.8 213 46.5
AUR62036707 Chenopodium quinoa HOM05D007020 ORTHO05D008935 1.0e-32 144.4 145 55.2
SGA_v2.0_scaffold173G39193 Striga asiatica HOM05D003133 ORTHO05D003642 1.0e-32 144.4 257 43.6
HPP92_004932 Vanilla planifolia HOM05D007020 ORTHO05D008935 1.0e-32 144.4 125 63.2
MBI17_g14568_MAGBIO Magnolia biondii HOM05D007020 ORTHO05D008935 2.6e-31 139.8 241 42.7
Pp3c21_5880 Physcomitrium patens HOM05D007020 ORTHO05D008935 1.8e-29 133.7 175 44.0
AagrBONN_evm.TU.Sc2ySwM_228.144 Anthoceros agrestis HOM05D007020 ORTHO05D008935 1.9e-26 123.6 136 50.0
SHI08019 Sapria himalayana HOM05D007020 ORTHO05D008935 2.1e-25 120.2 211 42.7
SMO169G0131 Selaginella moellendorffii HOM05D007020 ORTHO05D008935 3.6e-25 119.4 140 49.3
Mapoly0092s0023 Marchantia polymorpha HOM05D007020 ORTHO05D008935 1.0e-24 117.9 236 35.6
Thecc.08G050800 Theobroma cacao HOM05D007020 ORTHO05D008935 1.5e-23 114.0 90 64.4
MCO01G778 Micromonas commoda HOM05D007020 ORTHO05D008935 3.8e-19 99.4 154 41.6
PRCOL_00000246 Prasinoderma coloniale HOM05D007020 ORTHO05D008935 8.6e-19 98.2 133 44.4
Actinidia15460 Actinidia chinensis HOM05D007020 ORTHO05D008935 1.1e-18 97.8 79 64.6
Pp3s46_330 Physcomitrium patens HOM05D007020 ORTHO05D008935 5.6e-18 95.5 168 36.3
Cre02.g078750 Chlamydomonas reinhardtii HOM05D007020 ORTHO05D008935 1.6e-17 94.0 154 39.0
CBR_g29446 Chara braunii HOM05D007020 ORTHO05D008935 6.4e-14 82.0 188 33.0
SMO169G0279 Selaginella moellendorffii HOM05D007020 ORTHO05D008935 2.8e-09 66.6 100 41.0
Nn3g20659 Nelumbo nucifera HOM05D007020 ORTHO05D008935 8.0e-09 65.1 47 72.3
MCO15G029 Micromonas commoda HOM05D007020 ORTHO05D008102 1.3e-06 57.8 120 35.8


User provided reference genes

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