Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.224 chr13 - View
Actinidia chinensis Actinidia17018 Lachesis_group28 - View
Actinidia chinensis Actinidia15460 Lachesis_group26 - View
Arabidopsis lyrata AL2G36070 scaffold_2 + View
Amaranthus hybridus Ah.11g040270 RNA pseudouridine synthase 2, chloroplastic (EC 5.4.99.-) (RNA pseudouridylate synthase 2) (RNA-uridine isomerase 2) AmaHy_arrow1_Scaffold_11 - View
Aquilegia oxysepala Aqoxy6G02012 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YGS75T K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.W20NI2 K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT1G76050 Pseudouridine synthase family protein Pseudouridine synthase family protein%3B FUNCTIONS IN: pseudouridine synthase activity%3B INVOLVED IN: pseudouridine synthesis%2C RNA modification%3B LOCATED IN: chloroplast%3B EXPRESSED IN: shoot%2C leaf lamina base%2C stem%2C embryo%2C leaf whorl%3B EXPRESSED DURING: D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pseudouridine synthase%2C catalytic domain (InterPro:IPR020103)%2C Pseudouridine synthase%2C RsuA and RluB/C/D/E/F (InterPro:IPR006145)%2C Pseudouridine synthase%2C RluC/RluD%2C conserved site (InterPro:IPR006224)%2C RNA-binding S4 (InterPro:IPR002942)%3B Has 15192 Blast hits to 15192 proteins in 2580 species: Archae - 12%3B Bacteria - 11504%3B Metazoa - 97%3B Fungi - 82%3B Plants - 90%3B Viruses - 0%3B Other Eukaryotes - 3407 (source: NCBI BLink). Pseudouridine synthase family protein%3B FUNCTIONS IN: pseudouridine synthase activity%3B INVOLVED IN: pseudouridine synthesis%2C RNA modification%3B LOCATED IN: chloroplast%3B EXPRESSED IN: shoot%2C leaf lamina base%2C stem%2C embryo%2C leaf whorl%3B EXPRESSED DURING: D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pseudouridine synthase%2C RluC/RluD (InterPro:IPR006225)%2C Pseudouridine synthase%2C catalytic domain (InterPro:IPR020103)%2C Pseudouridine synthase%2C RsuA and RluB/C/D/E/F (InterPro:IPR006145)%2C Pseudouridine synthase%2C RluC/RluD%2C conserved site (InterPro:IPR006224)%2C RNA-binding S4 (InterPro:IPR002942)%3B BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G19440.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0661G229 AmTr_v1.0_scaffold00001 + View
Brassica carinata BcaC08g47097 ChrC08 + View
Brassica carinata BcaC08g47303 ChrC08 - View
Brassica napus A07p41540 A07 + View
Brassica napus C06p49960 C06 + View
Brassica oleracea BolC6t40035H C6 + View
Brassica rapa BraA07t31686Z A07 + View
Beta vulgaris EL10Ac1g02092 PTHR11079//PTHR11079:SF73 - CYTOSINE DEAMINASE // RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTIC Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G311.66 PGAv.1.6.scaffold311 + View
Cicer arietinum L. Ca_15469_v3 Ca_LG5_v3 - View
Corylus avellana Haze_22697 Similar to At1g76050: RNA pseudouridine synthase 2, chloroplastic (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc10_g01170 RNA pseudourine synthase 2, chloroplastic chr10 - View
Citrus clementina Ciclev10001736m.g scaffold_5 + View
Carpinus fangiana Cfa014002 Cfa05 + View
Cardamine hirsuta CARHR069580 Pseudouridine synthase family protein Chr2 + View
Carya illinoinensis CiPaw.07G144000 K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) Chr07 - View
Citrullus lanatus ClCG08G014040 Ribosomal large subunit pseudouridine synthase D CG_Chr08 - View
Cucumis melo MELO3C011342.2 Pseudouridine synthase chr03 + View
Corchorus olitorius COL.COLO4_26091 hypothetical protein AWUE01019205.1 - View
Carica papaya Cpa.g.sc26.268 supercontig_26 - View
Chenopodium quinoa AUR62036706 Protein of unknown function C_Quinoa_Scaffold_3541 + View
Chenopodium quinoa AUR62013887 At1g76050: RNA pseudouridine synthase 2, chloroplastic C_Quinoa_Scaffold_1412 - View
Capsella rubella Carub.0002s2293 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase scaffold_2 + View
Cucumis sativus L. CsaV3_2G024410 Pseudouridine synthase chr2 + View
Davidia involucrata Dinv31889 GWHABJS00000002 + View
Durio zibethinus Duzib093G0969 NW_019167937.1 + View
Eucalyptus grandis Eucgr.F03712 Chr06 - View
Erythranthe guttata Migut.C00895 scaffold_3 + View
Eutrema salsugineum Thhalv10018588m.g K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) scaffold_9 - View
Gossypium hirsutum Gohir.D05G186100 K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) D05 - View
Gossypium hirsutum Gohir.A05G183200 PTHR11079//PTHR11079:SF73 - CYTOSINE DEAMINASE // RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTIC A05 - View
Glycine max Glyma.06G021100 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase Gm06 - View
Glycine max Glyma.04G020900 K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) Gm04 - View
Lupinus albus Lalb_Chr08g0246281 K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) Lalb_Chr08 + View
Lotus japonicus Lj1g0017386 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase chr1 - View
Lonicera japonica Lj4A801T43 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_0_761 Lsat_1_v8_lg_0 + View
Medicago truncatula Medtr3g114540 RNA pseudouridine synthase, putative chr3 + View
Nicotiana tabacum Nitab4.5_0003030g0130 Pseudouridine synthase, RluC/RluD, conserved site, RNA-binding S4 domain, Pseudouridine synthase, RsuA/RluB/C/D/E/F, Pseudouridine synthase, catalytic domain Nitab4.5_0003030 - View
Petunia axillaris Peaxi162Scf00174g00717 Ribosomal large subunit pseudouridine synthase D Peaxi162Scf00174 + View
Punica granatum PGR031G0358 NC_045127.1 - View
Pisum sativum Psat5g012400 RNA pseudouridylate synthase chr5LG3 - View
Populus trichocarpa Potri.002G016800 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase Chr02 - View
Phaseolus vulgaris Phvul.009G019500 Chr09 + View
Quercus lobata QL02p012883 CM012294 + View
Rhododendron simsii Rhsim06G0012300 chr06 - View
Salix brachista Sabra02G0013400 GWHAAZH00000002 - View
Simmondsia chinensis Sc26g0004460 GWHAASQ00000026 + View
Sechium edule Sed0026116 LG11 + View
Sapria himalayana SHI08019 scaffold7_18583372 + View
Solanum lycopersicum Solyc04g081920.3 Pseudouridine synthase (AHRD V3.3 *** A0A2G2V5B2_CAPBA) SL4.0ch04 + View
Schrenkiella parvula Sp5g31160 K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) ch5-7 + View
Solanum pennellii Sopen04g035560 Pseudouridine synthase family protein | FUNCTIONS IN: pseudouridine synthase activity | INVOLVED IN: pseudouridine synthesis, RNA modification | LOCATED IN: chloroplast | EXPRESSED IN: shoot, leaf lamina base, stem, embryo, leaf whorl | EXPRESSED DURING: D bilateral stage | CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, RluC/RluD , Pseudouridine synthase, catalytic domain , Pseudouridine synthase, RsuA and RluB/C/D/E/F , Pseudouridine synthase, RluC/RluD, conserved site , RNA-binding S4 | BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400009884 RNA pseudourine synthase 2, chloroplastic ST4.03ch04 + View
Selenicereus undatus Hund05155 Scaffold_19641 - View
Trochodendron aralioides TAR376G1009 group14 + View
Theobroma cacao Thecc.08G050800 RNA pseudourine synthase 2 Chromosome_8 + View
Tarenaya hassleriana THA.LOC104809629 RNA pseudouridine synthase 2%2C chloroplastic NW_010960187.1 + View
Trifolium pratense TPR.G38245 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI36G0910 NC_052237.1 + View
Vaccinium macrocarpon vmacro21850 Similar to At1g76050: RNA pseudouridine synthase 2, chloroplastic (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1583 CM024072.1 + View
Vitis vinifera GSVIVG01008746001 chr18 - View