Gene: Ah.11g040270

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.11g040270
  • Transcript Identifier Ah.11g040270-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_11 : 3491109-3500213 : negative

Gene Family Information

  • ID HOM05D007020
  • #Genes/#Species 114/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.11g040270-v1.1.a1

Descriptions

  • Description RNA pseudouridine synthase 2, chloroplastic (EC 5.4.99.-) (RNA pseudouridylate synthase 2) (RNA-uridine isomerase 2)
  • note RNA pseudouridine synthase 2, chloroplastic (EC 5.4.99.-) (RNA pseudouridylate synthase 2) (RNA-uridine isomerase 2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002942 RNA-binding S4 domain
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR006145 Pseudouridine synthase, RsuA/RluA-like
IPR036986 RNA-binding S4 domain superfamily
Mapman id Description
16.5.3.4 RNA processing.RNA modification.pseudouridylation.dual-specificity tRNA/rRNA pseudouridine synthase (RluA)