Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020233 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 2.4e-29 131.3 60 100.0
CSS0040437 Camellia sinensis var. sinensis HOM05D001165 ORTHO05D002399 1.2e-23 112.5 69 81.2
CSS0001981 Camellia sinensis var. sinensis HOM05D001165 ORTHO05D002399 3.4e-23 110.9 69 79.7
CSS0003868 Camellia sinensis var. sinensis HOM05D001165 ORTHO05D002399 3.4e-23 110.9 69 79.7
CSS0016257 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.9e-21 105.1 67 79.1
CSS0042457 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.9e-21 105.1 67 79.1
Atru.chr1.1803 Acer truncatum HOM05D000572 ORTHO05D002399 7.0e-21 103.2 67 76.1
Actinidia19530 Actinidia chinensis HOM05D000572 ORTHO05D002399 1.6e-20 102.1 67 76.1
Nitab4.5_0004345g0030 Nicotiana tabacum HOM05D000572 ORTHO05D002399 2.7e-20 101.3 59 79.7
Dinv29674 Davidia involucrata HOM05D000572 ORTHO05D002399 3.5e-20 100.9 67 74.6
Cpa.g.sc37.192 Carica papaya HOM05D000572 ORTHO05D002399 7.8e-20 99.8 67 74.6
AUR62021310 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.0e-19 99.4 67 73.1
AUR62043444 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.0e-19 99.4 67 73.1
HanXRQChr04g0120041 Helianthus annuus HOM05D000572 ORTHO05D002399 1.0e-19 99.4 67 73.1
HanXRQChr11g0347301 Helianthus annuus HOM05D000572 ORTHO05D002399 1.0e-19 99.4 67 73.1
ECA236G0624 Erigeron canadensis HOM05D000572 ORTHO05D002399 1.3e-19 99.0 67 71.6
Hund15395 Selenicereus undatus HOM05D000572 ORTHO05D002399 1.3e-19 99.0 67 73.1
Gohir.A05G373000 Gossypium hirsutum HOM05D000572 ORTHO05D002399 2.3e-19 98.2 67 73.1
Rhsim11G0118300 Rhododendron simsii HOM05D000572 ORTHO05D002399 2.3e-19 98.2 66 74.2
Sc02g0000170 Simmondsia chinensis HOM05D000572 ORTHO05D002399 2.3e-19 98.2 67 73.1
Duzib160G0412 Durio zibethinus HOM05D000572 ORTHO05D002399 3.0e-19 97.8 65 73.8
Lsat_1_v5_gn_7_75121 Lactuca sativa HOM05D000572 ORTHO05D002399 3.9e-19 97.4 67 71.6
Thecc.01G144800 Theobroma cacao HOM05D000572 ORTHO05D002399 3.9e-19 97.4 67 71.6
Dinv29626 Davidia involucrata HOM05D000572 ORTHO05D002399 5.0e-19 97.1 67 71.6
PGR119G1310 Punica granatum HOM05D000572 ORTHO05D002399 5.0e-19 97.1 67 70.1
CiPaw.12G053900 Carya illinoinensis HOM05D000572 ORTHO05D002399 6.6e-19 96.7 67 71.6
Duzib147G0313 Durio zibethinus HOM05D000572 ORTHO05D002399 6.6e-19 96.7 67 71.6
Lj2A766T19 Lonicera japonica HOM05D000572 ORTHO05D002399 6.6e-19 96.7 67 71.6
Lj5A282T76 Lonicera japonica HOM05D000572 ORTHO05D002399 6.6e-19 96.7 65 72.3
EL10Ac8g18295 Beta vulgaris HOM05D000572 ORTHO05D002399 8.6e-19 96.3 67 71.6
ClCG11G000400 Citrullus lanatus HOM05D000572 ORTHO05D002399 8.6e-19 96.3 67 70.1
CsaV3_5G013990 Cucumis sativus L. HOM05D000572 ORTHO05D002399 8.6e-19 96.3 67 70.1
DCAR_003283 Daucus carota HOM05D000572 ORTHO05D002399 8.6e-19 96.3 67 73.1
Dinv19128 Davidia involucrata HOM05D000572 ORTHO05D002399 8.6e-19 96.3 67 73.1
Manes.13G119400 Manihot esculenta HOM05D000572 ORTHO05D002399 8.6e-19 96.3 67 71.6
Lalb_Chr01g0008651 Lupinus albus HOM05D000572 ORTHO05D002399 1.1e-18 95.9 67 73.1
Sed0009647 Sechium edule HOM05D000572 ORTHO05D002399 1.1e-18 95.9 67 70.1
TWI63G0302 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 1.1e-18 95.9 67 71.6
Gorai.012G048000 Gossypium raimondii HOM05D000572 ORTHO05D002399 1.9e-18 95.1 67 71.6
Lalb_Chr03g0033391 Lupinus albus HOM05D000572 ORTHO05D002399 2.5e-18 94.7 67 71.6
Nn5g27348 Nelumbo nucifera HOM05D000572 ORTHO05D002399 2.5e-18 94.7 67 68.7
TWI15G0599 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 2.5e-18 94.7 67 70.1
TAR633G0967 Trochodendron aralioides HOM05D000572 ORTHO05D002399 2.5e-18 94.7 67 70.1
Atru.chr12.1878 Acer truncatum HOM05D000572 ORTHO05D002399 3.3e-18 94.4 67 70.1
Thhalv10003514m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 3.3e-18 94.4 67 71.6
VMungo0464G1362 Vigna mungo HOM05D000572 ORTHO05D002399 3.3e-18 94.4 67 71.6
Aqoxy7G03575 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 4.3e-18 94.0 66 69.7
Haze_19377 Corylus avellana HOM05D000572 ORTHO05D002399 4.3e-18 94.0 67 68.7
Solyc11g030600.3 Solanum lycopersicum HOM05D000572 ORTHO05D002399 4.3e-18 94.0 67 70.1
Sopen11g013460 Solanum pennellii HOM05D000572 ORTHO05D002399 4.3e-18 94.0 67 70.1
THA.LOC104823726 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 4.3e-18 94.0 64 71.9
HPP92_005786 Vanilla planifolia HOM05D000572 ORTHO05D002399 4.3e-18 94.0 67 71.6
arahy.Tifrunner.gnm1.ann1.I0VWWF Arachis hypogaea HOM05D000572 ORTHO05D002399 5.6e-18 93.6 67 71.6
Gohir.D04G042500 Gossypium hirsutum HOM05D000572 ORTHO05D002399 5.6e-18 93.6 67 70.1
Lj2g0020412 Lotus japonicus HOM05D000572 ORTHO05D002399 5.6e-18 93.6 67 70.1
Lj3g0025806 Lotus japonicus HOM05D000572 ORTHO05D002399 5.6e-18 93.6 67 70.1
Os07g0182900 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 5.6e-18 93.6 67 70.1
THA.LOC104820805 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 5.6e-18 93.6 65 70.8
GSVIVG01000263001 Vitis vinifera HOM05D000572 ORTHO05D002399 5.6e-18 93.6 67 68.7
AUR62028016 Chenopodium quinoa HOM05D000572 ORTHO05D002399 7.3e-18 93.2 64 70.3
Sabra04G0084200 Salix brachista HOM05D000572 ORTHO05D002399 7.3e-18 93.2 67 67.2
Sp4g01970 Schrenkiella parvula HOM05D000572 ORTHO05D002399 7.3e-18 93.2 67 70.1
GSVIVG01023152001 Vitis vinifera HOM05D000572 ORTHO05D002399 7.3e-18 93.2 67 67.2
Zm00001eb301620 Zea mays HOM05D000572 ORTHO05D002399 7.3e-18 93.2 67 67.2
Zm00001eb301630 Zea mays HOM05D000572 ORTHO05D002399 7.3e-18 93.2 67 67.2
MD15G1231100 Malus domestica HOM05D000572 ORTHO05D002399 9.5e-18 92.8 67 68.7
Peaxi162Scf01053g00039 Petunia axillaris HOM05D000572 ORTHO05D002399 9.5e-18 92.8 67 68.7
arahy.Tifrunner.gnm1.ann1.5512QZ Arachis hypogaea HOM05D000572 ORTHO05D002399 1.2e-17 92.4 67 70.1
Medtr6g065580 Medicago truncatula HOM05D000572 ORTHO05D002399 1.2e-17 92.4 67 70.1
Nitab4.5_0004640g0010 Nicotiana tabacum HOM05D000572 ORTHO05D002399 1.2e-17 92.4 65 70.8
TPR.G12077 Trifolium pratense HOM05D000572 ORTHO05D002399 1.2e-17 92.4 66 71.2
vmacro01683 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 1.2e-17 92.4 80 58.8
HPP92_005803 Vanilla planifolia HOM05D000572 ORTHO05D002399 1.2e-17 92.4 67 70.1
MD02G1115100 Malus domestica HOM05D000572 ORTHO05D002399 1.6e-17 92.0 67 68.7
Medtr2g046020 Medicago truncatula HOM05D000572 ORTHO05D002399 1.6e-17 92.0 67 70.1
QL10p035076 Quercus lobata HOM05D000572 ORTHO05D002399 1.6e-17 92.0 67 68.7
SGA_v2.0_scaffold8G04469 Striga asiatica HOM05D000572 ORTHO05D002399 1.6e-17 92.0 67 67.2
GSVIVG01000262001 Vitis vinifera HOM05D000572 ORTHO05D002399 1.6e-17 92.0 64 70.3
BcaC07g41015 Brassica carinata HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 68.7
C08p40170 Brassica napus HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 68.7
BolC8t51587H Brassica oleracea HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 68.7
Ca_28418_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 70.1
Glyma.04G187600 Glycine max HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 70.1
Glyma.06G178200 Glycine max HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 70.1
Psat1g114520 Pisum sativum HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 68.7
Potri.018G138000 Populus trichocarpa HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 67.2
Potri.T046100 Populus trichocarpa HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 67.2
Prupe.7G183100 Prunus persica HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 65.7
RcHm_v2.0_Chr5g0051581 Rosa chinensis HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 68.7
Sabra19G0000100 Salix brachista HOM05D000572 ORTHO05D002399 2.1e-17 91.7 67 67.2
DCAR_009626 Daucus carota HOM05D000572 ORTHO05D002399 2.8e-17 91.3 67 68.7
Eucgr.I00036 Eucalyptus grandis HOM05D000572 ORTHO05D002399 2.8e-17 91.3 67 67.2
Eucgr.I00087 Eucalyptus grandis HOM05D000572 ORTHO05D002399 2.8e-17 91.3 67 67.2
MBI03_g20877_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 2.8e-17 91.3 67 68.7
PGSC0003DMG400030941 Solanum tuberosum HOM05D000572 ORTHO05D002399 2.8e-17 91.3 67 67.2
SGA_v2.0_scaffold122G33283 Striga asiatica HOM05D000572 ORTHO05D002399 2.8e-17 91.3 67 65.7
AL8G22690 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 3.6e-17 90.9 64 71.9
Carub.0008s0898 Capsella rubella HOM05D000572 ORTHO05D002399 3.6e-17 90.9 67 68.7
CAN.G868.5 Capsicum annuum HOM05D000572 ORTHO05D002399 3.6e-17 90.9 67 67.2
A09p57170 Brassica napus HOM05D000572 ORTHO05D002399 4.7e-17 90.5 67 68.7
BraA09t41110Z Brassica rapa HOM05D000572 ORTHO05D002399 4.7e-17 90.5 67 68.7
CANSAT01G1917 Cannabis sativa HOM05D000572 ORTHO05D002399 4.7e-17 90.5 67 67.2
DCAR_019941 Daucus carota HOM05D000572 ORTHO05D002399 4.7e-17 90.5 67 67.2
Os03g0798300 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 4.7e-17 90.5 67 64.2
Aqoxy1G02545 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 6.2e-17 90.1 66 68.2
MSTRG.27892 Avicennia marina HOM05D000572 ORTHO05D002399 6.2e-17 90.1 67 65.7
Lj5g0006387 Lotus japonicus HOM05D000572 ORTHO05D002399 6.2e-17 90.1 67 68.7
Potri.004G134000 Populus trichocarpa HOM05D000572 ORTHO05D002399 8.1e-17 89.7 67 64.2
SHI05188 Sapria himalayana HOM05D000572 ORTHO05D002399 8.1e-17 89.7 64 68.8
Ah.01g020670 Amaranthus hybridus HOM05D000572 ORTHO05D002399 1.1e-16 89.4 67 67.2
AT5G49160 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.1e-16 89.4 67 67.2
Thhalv10000011m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 1.4e-16 89.0 67 68.7
PSO210G2968 Papaver somniferum HOM05D000572 ORTHO05D002399 1.8e-16 88.6 67 67.2
PSO447G0024 Papaver somniferum HOM05D000572 ORTHO05D002399 1.8e-16 88.6 67 67.2
TPR.G37023 Trifolium pratense HOM05D000572 ORTHO05D002399 1.8e-16 88.6 64 71.9
VMungo0464G1539 Vigna mungo HOM05D000572 ORTHO05D002399 1.8e-16 88.6 66 68.2
CAN.G1330.38 Capsicum annuum HOM05D000572 ORTHO05D002399 2.3e-16 88.2 67 67.2
Ca_03350_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 2.3e-16 88.2 67 67.2
Ca_03370_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 2.3e-16 88.2 67 67.2
Migut.N00875 Erythranthe guttata HOM05D000572 ORTHO05D002399 2.3e-16 88.2 67 62.7
FvH4_1g10300 Fragaria vesca HOM05D000572 ORTHO05D002399 2.3e-16 88.2 67 65.7
FAN19G1502 Fragaria x ananassa HOM05D000572 ORTHO05D002399 2.3e-16 88.2 67 65.7
FAN26G0750 Fragaria x ananassa HOM05D000572 ORTHO05D002399 2.3e-16 88.2 67 65.7
ATR0584G123 Amborella trichopoda HOM05D000572 ORTHO05D002399 3.1e-16 87.8 67 64.2
CDE12G0358 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 3.1e-16 87.8 67 65.7
Aa31LG11G8250 Aethionema arabicum HOM05D000572 ORTHO05D002399 4.0e-16 87.4 65 66.2
EL10Ac9g22421 Beta vulgaris HOM05D000572 ORTHO05D002399 4.0e-16 87.4 60 71.7
RcHm_v2.0_Chr2g0097141 Rosa chinensis HOM05D000572 ORTHO05D002399 4.0e-16 87.4 65 66.2
Phvul.004G133200 Phaseolus vulgaris HOM05D000572 ORTHO05D002399 5.2e-16 87.0 67 67.2
AagrBONN_evm.TU.Sc2ySwM_368.2421 Anthoceros agrestis HOM05D000572 ORTHO05D002399 1.2e-15 85.9 65 67.7
AT4G08990 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.5e-15 85.5 67 62.7
AT4G14140 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.5e-15 85.5 67 62.7
BcaB06g27851 Brassica carinata HOM05D000572 ORTHO05D002399 1.5e-15 85.5 65 66.2
BcaC02g08585 Brassica carinata HOM05D000572 ORTHO05D002399 1.5e-15 85.5 65 66.2
A04p17510 Brassica napus HOM05D000572 ORTHO05D002399 1.5e-15 85.5 65 66.2
C04p52290 Brassica napus HOM05D000572 ORTHO05D002399 1.5e-15 85.5 65 66.2
BolC4t26803H Brassica oleracea HOM05D000572 ORTHO05D002399 1.5e-15 85.5 65 66.2
BraA04t17374Z Brassica rapa HOM05D000572 ORTHO05D002399 1.5e-15 85.5 65 66.2
SEGI_08948 Sequoiadendron giganteum HOM05D001165 ORTHO05D002399 1.5e-15 85.5 67 62.7
SEGI_11646 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.5e-15 85.5 67 62.7
SEGI_36703 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.5e-15 85.5 67 62.7
AT4G13610 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 2.0e-15 85.1 64 65.6
Oeu032220.1 Olea europaea HOM05D000572 ORTHO05D002399 2.0e-15 85.1 67 61.2
Thhalv10005683m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 2.6e-15 84.7 67 62.7
Sp2g19890 Schrenkiella parvula HOM05D000572 ORTHO05D002399 2.6e-15 84.7 64 67.2
CSS0036208 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 4.4e-15 84.0 44 93.2
Carub.0004s0387 Capsella rubella HOM05D000572 ORTHO05D002399 4.4e-15 84.0 67 64.2
CARHR185450 Cardamine hirsuta HOM05D000572 ORTHO05D002399 7.5e-15 83.2 64 64.1
Carub.0007s2893 Capsella rubella HOM05D000572 ORTHO05D002399 1.3e-14 82.4 67 62.7
CARHR287780 Cardamine hirsuta HOM05D001165 ORTHO05D002399 1.3e-14 82.4 64 65.6
BcaC06g30720 Brassica carinata HOM05D000572 ORTHO05D002399 1.7e-14 82.0 63 68.3
SMO358G0070 Selaginella moellendorffii HOM05D000572 ORTHO05D002399 1.7e-14 82.0 66 62.1
AL7G42980 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 2.2e-14 81.6 64 64.1
BcaNung05957 Brassica carinata HOM05D000572 ORTHO05D002399 2.2e-14 81.6 64 65.6
A06p38240 Brassica napus HOM05D000572 ORTHO05D002399 2.2e-14 81.6 64 65.6
C07p39990 Brassica napus HOM05D000572 ORTHO05D002399 2.2e-14 81.6 64 65.6
BraA06t26739Z Brassica rapa HOM05D000572 ORTHO05D002399 2.2e-14 81.6 64 65.6
Cc02_g23510 Coffea canephora HOM05D000572 ORTHO05D002399 4.9e-14 80.5 65 63.1
BolC7t44532H Brassica oleracea HOM05D000572 ORTHO05D002399 6.4e-14 80.1 64 64.1
AL7G42360 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 8.3e-14 79.7 67 61.2
Pp3c11_20540 Physcomitrium patens HOM05D000572 ORTHO05D002399 8.3e-14 79.7 67 61.2
Mapoly0038s0027 Marchantia polymorpha HOM05D000572 ORTHO05D002399 1.4e-13 79.0 67 62.7
Prupe.7G060100 Prunus persica HOM05D000572 ORTHO05D002399 3.2e-13 77.8 57 64.9
TAR628G0348 Trochodendron aralioides HOM05D000572 ORTHO05D002399 2.1e-12 75.1 67 56.7
COL.COLO4_12145 Corchorus olitorius HOM05D000572 ORTHO05D002399 1.3e-11 72.4 57 66.7
Atru.chr6.334 Acer truncatum HOM05D000572 ORTHO05D002399 1.5e-10 68.9 59 62.7
Oeu046383.1 Olea europaea HOM05D000572 ORTHO05D002399 1.5e-10 68.9 50 60.0
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 1.9e-10 68.6 51 62.7
Cre10.g461750 Chlamydomonas reinhardtii HOM05D000572 ORTHO05D002399 3.3e-10 67.8 67 50.7
AUR62001559 Chenopodium quinoa HOM05D000572 ORTHO05D002399 5.6e-10 67.0 42 76.2
TAR525G0001 Trochodendron aralioides HOM05D000572 ORTHO05D002399 8.1e-09 63.2 64 50.0
CDE01G0823 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 5.2e-08 60.5 48 62.5
Oeu008467.1 Olea europaea HOM05D000572 ORTHO05D002399 7.6e-07 56.6 65 49.2


User provided reference genes

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