Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 0.0e+00 1314.3 662 100.0
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 1.8e-298 1028.9 662 78.2
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 1.6e-275 952.6 661 73.2
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 3.5e-238 828.6 666 64.0
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 2.8e-235 818.9 668 63.0
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 2.7e-222 775.8 671 61.5
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 4.3e-220 768.5 670 61.5
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 7.3e-220 767.7 671 61.8
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 2.4e-215 752.7 668 59.1
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 9.3e-215 750.7 663 59.6
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 7.8e-214 747.7 600 63.5
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 3.0e-213 745.7 672 59.5
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 7.3e-212 741.1 661 58.7
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 4.8e-211 738.4 630 61.7
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 8.1e-211 737.6 658 59.3
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 3.1e-210 735.7 662 58.9
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 6.9e-210 734.6 661 58.2
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 1.5e-209 733.4 671 59.2
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 1.3e-208 730.3 671 58.9
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 1.3e-208 730.3 692 57.5
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 1.9e-207 726.5 671 57.8
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 3.2e-207 725.7 670 56.6
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 1.6e-206 723.4 670 60.3
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 3.5e-206 722.2 673 58.7
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 7.9e-206 721.1 669 57.8
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 2.3e-205 719.5 674 58.0
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 5.1e-205 718.4 776 53.9
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 8.7e-205 717.6 661 58.1
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.9e-204 716.5 669 57.4
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 2.5e-204 716.1 669 57.2
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 1.3e-203 713.8 684 57.9
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 3.7e-203 712.2 671 56.6
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 8.1e-203 711.1 604 60.6
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 3.1e-202 709.1 656 57.5
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 1.2e-201 707.2 678 59.0
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 1.3e-197 693.7 664 56.0
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 1.9e-196 689.9 558 65.2
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 2.5e-196 689.5 650 56.6
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 5.6e-196 688.3 730 52.5
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 3.1e-194 682.6 557 65.0
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 2.0e-193 679.9 622 58.7
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 3.4e-193 679.1 668 55.1
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 1.0e-192 677.6 672 55.2
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 2.9e-192 676.0 635 57.3
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 6.5e-192 674.9 602 60.8
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 7.1e-191 671.4 609 58.6
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 4.6e-190 668.7 661 55.5
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 1.8e-189 666.8 663 52.5
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 1.8e-189 666.8 638 55.8
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 2.8e-187 659.4 615 56.6
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 2.4e-186 656.4 674 52.8
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 3.1e-186 656.0 628 56.8
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 2.0e-185 653.3 670 53.4
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 1.3e-184 650.6 610 57.9
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 2.9e-184 649.4 633 54.8
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 5.0e-184 648.7 594 57.6
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 6.5e-184 648.3 623 55.5
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 1.4e-183 647.1 600 56.3
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 1.5e-180 637.1 598 56.9
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 5.7e-180 635.2 664 54.4
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 5.7e-180 635.2 604 55.3
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 2.8e-179 632.9 676 53.4
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 1.1e-178 630.9 610 54.9
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 3.1e-178 629.4 615 56.9
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 5.0e-176 622.1 675 49.3
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 7.2e-175 618.2 639 52.3
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 2.4e-170 603.2 632 50.9
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 7.0e-170 601.7 674 49.9
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 1.5e-169 600.5 605 52.6
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 2.2e-168 596.7 609 51.2
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 7.2e-167 591.7 674 48.7
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 7.2e-167 591.7 669 48.6
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 2.1e-166 590.1 608 51.8
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 4.7e-166 589.0 607 50.2
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 8.0e-166 588.2 604 51.2
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 1.0e-165 587.8 604 51.8
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 2.3e-165 586.6 604 51.0
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 3.9e-165 585.9 608 51.5
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 1.5e-164 583.9 613 50.9
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 9.1e-162 574.7 593 51.1
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 2.0e-161 573.5 567 54.3
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 3.8e-144 516.2 605 47.6
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.1e-143 514.6 483 58.0
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 5.2e-141 505.8 656 44.2
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 8.9e-141 505.0 601 46.1
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 8.3e-123 445.3 527 48.4
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 6.0e-121 439.1 461 54.4
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 4.7e-110 402.9 356 60.4
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 8.4e-99 365.5 593 37.4
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 1.1e-95 355.1 360 50.8
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 9.6e-95 352.1 658 34.5
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 6.9e-77 292.7 727 29.0
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 7.1e-74 282.7 298 50.3
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 1.2e-73 282.0 335 46.0
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 3.8e-67 260.4 571 32.4
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 1.1e-63 248.8 535 32.9
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 5.5e-58 229.9 207 54.6
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 2.2e-43 181.4 174 55.7
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 4.2e-42 177.2 176 52.8
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 5.5e-42 176.8 174 54.6
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 9.4e-34 149.4 124 55.6
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 7.5e-23 113.2 226 33.6
CDE06G1765 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 4.9e-22 110.5 153 38.6
Pp3c4_17200 Physcomitrium patens HOM05D003927 ORTHO05D004905 5.4e-21 107.1 434 23.0
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 9.2e-21 106.3 205 34.1
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 5.8e-15 87.0 83 43.4
THA.LOC104798460 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 9.5e-10 69.7 103 38.8
ECA238G4411 Erigeron canadensis HOM05D003927 ORTHO05D004905 4.9e-06 57.4 98 29.6
CANSAT64G2986 Cannabis sativa HOM05D003927 ORTHO05D004905 6.4e-06 57.0 98 28.6
SalBow8G3138 Salvia bowleyana HOM05D003927 ORTHO05D004905 6.4e-06 57.0 95 29.5


User provided reference genes

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