Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0019621 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 2.8e-250 868.2 461 100.0
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 7.3e-243 843.6 459 97.4
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 2.7e-144 516.2 430 64.2
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 1.9e-126 456.8 498 54.0
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 7.3e-126 454.9 464 56.7
Lj9A583T57 Lonicera japonica HOM05D006136 ORTHO05D007244 2.3e-111 406.8 456 51.5
Actinidia33603 Actinidia chinensis HOM05D006136 ORTHO05D007244 4.3e-110 402.5 377 61.3
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 7.4e-110 401.7 430 52.3
QL05p072260 Quercus lobata HOM05D000321 ORTHO05D007244 2.8e-109 399.8 430 52.1
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 1.8e-108 397.1 431 51.5
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 2.7e-104 383.3 421 50.4
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 2.6e-99 366.7 434 50.5
TAR626G0660 Trochodendron aralioides HOM05D006136 ORTHO05D007244 6.5e-98 362.1 406 49.5
Cpa.g.sc46.113 Carica papaya HOM05D006136 ORTHO05D007244 7.1e-97 358.6 427 46.6
Oeu000955.1 Olea europaea HOM05D006136 ORTHO05D007244 7.2e-89 332.0 419 45.8
DCAR_020445 Daucus carota HOM05D006136 ORTHO05D002774 2.1e-88 330.5 426 45.8
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 3.9e-87 326.2 452 43.6
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 1.5e-86 324.3 452 43.4
Ciclev10007497m.g Citrus clementina HOM05D006136 ORTHO05D007244 2.8e-85 320.1 448 44.2
Cc06_g23510 Coffea canephora HOM05D006136 ORTHO05D007244 2.8e-85 320.1 407 49.9
TWI32G0914 Tripterygium wilfordii HOM05D006136 ORTHO05D007244 1.8e-84 317.4 438 42.7
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 1.5e-83 314.3 409 46.0
Aqoxy7G02564 Aquilegia oxysepala HOM05D006136 ORTHO05D007244 2.2e-82 310.5 448 44.2
Nn5g26953 Nelumbo nucifera HOM05D006136 ORTHO05D007244 4.2e-81 306.2 466 42.3
Lsat_1_v5_gn_5_82020 Lactuca sativa HOM05D006136 ORTHO05D007244 1.0e-79 301.6 398 46.7
MSTRG.26507 Avicennia marina HOM05D006136 ORTHO05D007244 1.4e-79 301.2 411 42.6
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 1.4e-79 301.2 430 42.6
Sc06g0001020 Simmondsia chinensis HOM05D006136 ORTHO05D007244 9.7e-78 295.0 415 42.7
PSO478G4925 Papaver somniferum HOM05D006136 ORTHO05D007244 1.3e-77 294.7 438 40.9
Potri.018G151300 Populus trichocarpa HOM05D006136 ORTHO05D007244 1.3e-77 294.7 488 40.4
Nitab4.5_0000807g0150 Nicotiana tabacum HOM05D006136 ORTHO05D007244 3.7e-77 293.1 433 42.7
ECA234G2139 Erigeron canadensis HOM05D006136 ORTHO05D007244 4.8e-77 292.7 399 44.9
Eucgr.C02149 Eucalyptus grandis HOM05D006136 ORTHO05D007244 1.4e-76 291.2 414 44.9
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 3.1e-76 290.0 429 42.2
PSO782G1690 Papaver somniferum HOM05D006136 ORTHO05D007244 5.3e-76 289.3 438 40.4
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 1.7e-74 284.3 423 40.7
EL10Ac2g03821 Beta vulgaris HOM05D006136 ORTHO05D007244 2.9e-74 283.5 436 41.1
Haze_21244 Corylus avellana HOM05D006136 ORTHO05D007244 2.9e-74 283.5 358 47.5
Peaxi162Scf00474g00018 Petunia axillaris HOM05D006136 ORTHO05D007244 2.9e-74 283.5 450 41.1
MELO3C010014.2 Cucumis melo HOM05D006136 ORTHO05D007244 5.0e-74 282.7 442 40.5
CsaV3_1G044190 Cucumis sativus L. HOM05D006136 ORTHO05D007244 5.0e-74 282.7 430 40.7
HanXRQChr10g0309281 Helianthus annuus HOM05D006136 ORTHO05D007244 6.5e-74 282.3 410 44.1
Prupe.1G000700 Prunus persica HOM05D006136 ORTHO05D007244 1.1e-73 281.6 436 42.4
Sopen07g022390 Solanum pennellii HOM05D006136 ORTHO05D007244 1.4e-73 281.2 278 52.5
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 4.2e-73 279.6 430 39.3
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 5.5e-73 279.3 409 42.3
Migut.L01610 Erythranthe guttata HOM05D006136 ORTHO05D007244 1.2e-72 278.1 444 38.3
Sabra18G0127000 Salix brachista HOM05D006136 ORTHO05D007244 3.6e-72 276.6 491 38.9
PGSC0003DMG400013541 Solanum tuberosum HOM05D006136 ORTHO05D007244 1.0e-71 275.0 437 40.0
ClCG03G011600 Citrullus lanatus HOM05D006136 ORTHO05D007244 6.7e-71 272.3 433 39.7
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 1.1e-70 271.6 427 40.7
Duzib170G0744 Durio zibethinus HOM05D006136 ORTHO05D007244 3.3e-70 270.0 521 36.3
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 5.7e-70 269.2 513 34.5
SalBow5G5580 Salvia bowleyana HOM05D006136 ORTHO05D007244 8.2e-69 265.4 407 41.3
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 2.4e-68 263.8 435 39.5
MD04G1000700 Malus domestica HOM05D006136 ORTHO05D007244 7.0e-68 262.3 439 39.9
PGR044G0474 Punica granatum HOM05D006136 ORTHO05D007244 1.6e-67 261.2 401 42.4
MBI16_g40727_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 3.5e-67 260.0 448 40.0
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 1.7e-66 257.7 513 33.9
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 1.7e-66 257.7 502 35.3
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 2.9e-66 256.9 507 34.3
COL.COLO4_09001 Corchorus olitorius HOM05D006136 ORTHO05D007244 8.5e-66 255.4 528 34.1
AL8G34230 Arabidopsis lyrata HOM05D006136 ORTHO05D007244 1.1e-65 255.0 393 40.2
RcHm_v2.0_Chr4g0384741 Rosa chinensis HOM05D006136 ORTHO05D007244 1.5e-65 254.6 437 40.5
Medtr2g048340 Medicago truncatula HOM05D006136 ORTHO05D007244 3.2e-65 253.4 437 37.8
Sp6g19810 Schrenkiella parvula HOM05D006136 ORTHO05D007244 4.2e-65 253.1 400 41.0
Nitab4.5_0000170g0140 Nicotiana tabacum HOM05D006136 ORTHO05D007244 1.6e-64 251.1 458 38.2
ATR0626G098 Amborella trichopoda HOM05D006136 ORTHO05D007244 2.7e-64 250.4 448 38.2
HPP92_017041 Vanilla planifolia HOM05D006136 ORTHO05D007244 2.7e-64 250.4 463 37.4
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 3.6e-64 250.0 430 39.1
CARHR271930 Cardamine hirsuta HOM05D006136 ORTHO05D007244 1.4e-63 248.1 399 40.1
AUR62009114 Chenopodium quinoa HOM05D000163 ORTHO05D007244 1.8e-63 247.7 452 38.7
AT5G58130 Arabidopsis thaliana HOM05D006136 ORTHO05D007244 2.3e-63 247.3 395 39.2
AUR62039148 Chenopodium quinoa HOM05D006136 ORTHO05D007244 4.0e-63 246.5 462 37.9
FAN17G2087 Fragaria x ananassa HOM05D006136 ORTHO05D007244 5.2e-63 246.1 429 38.0
Ca_02520_v3 Cicer arietinum L. HOM05D006136 ORTHO05D007244 6.7e-63 245.7 425 37.9
THA.LOC104803376 Tarenaya hassleriana HOM05D006136 ORTHO05D007244 5.7e-62 242.7 407 39.1
FAN12G3399 Fragaria x ananassa HOM05D006136 ORTHO05D007244 2.8e-61 240.4 429 37.3
Carub.0008s1868 Capsella rubella HOM05D006136 ORTHO05D007244 1.4e-60 238.0 393 39.4
Aa31LG3G13960 Aethionema arabicum HOM05D006136 ORTHO05D007244 1.8e-60 237.7 438 39.5
unitig_699.g19255 Utricularia gibba HOM05D006136 ORTHO05D007244 4.5e-59 233.0 423 36.2
A10p16060 Brassica napus HOM05D006136 ORTHO05D007244 1.7e-58 231.1 408 36.5
C09p50030 Brassica napus HOM05D006136 ORTHO05D007244 5.0e-58 229.6 393 38.2
Thhalv10012942m.g Eutrema salsugineum HOM05D006136 ORTHO05D007244 5.0e-58 229.6 434 35.5
BraA10t43623Z Brassica rapa HOM05D006136 ORTHO05D007244 6.5e-58 229.2 408 36.3
BolC9t57856H Brassica oleracea HOM05D006136 ORTHO05D007244 1.1e-57 228.4 393 38.2
Zm00001eb209220 Zea mays HOM05D006136 ORTHO05D007244 4.2e-57 226.5 434 37.6
BcaC04g19905 Brassica carinata HOM05D006136 ORTHO05D007244 2.1e-56 224.2 405 36.5
BcaB08g36165 Brassica carinata HOM05D006136 ORTHO05D007244 1.4e-55 221.5 393 36.9
Os02g0138200 Oryza sativa ssp. japonica HOM05D006136 ORTHO05D007244 5.2e-55 219.5 420 36.7
FAN12G0507 Fragaria x ananassa HOM05D006136 ORTHO05D007244 2.0e-54 217.6 437 35.0
FAN22G1396 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.3e-53 214.9 429 35.4
GSVIVG01038333001 Vitis vinifera HOM05D006136 ORTHO05D007244 5.9e-51 206.1 173 57.2
SGA_v2.0_scaffold21G09584 Striga asiatica HOM05D006136 ORTHO05D007244 2.9e-50 203.8 426 35.4
CANSAT01G2594 Cannabis sativa HOM05D006136 ORTHO05D007244 2.5e-49 200.7 337 37.7
SEGI_05126 Sequoiadendron giganteum HOM05D006136 ORTHO05D007244 1.6e-48 198.0 226 49.1
TPR.G18712 Trifolium pratense HOM05D006136 ORTHO05D007244 1.0e-47 195.3 370 37.3
Solyc07g042740.3 Solanum lycopersicum HOM05D006136 ORTHO05D007244 8.8e-47 192.2 214 47.2
CDE05G3219 Ceratophyllum demersum HOM05D006136 ORTHO05D007244 5.4e-44 183.0 320 37.2
PGR044G0304 Punica granatum HOM05D006136 ORTHO05D007244 5.4e-44 183.0 284 45.1
Lj1g0026291 Lotus japonicus HOM05D006136 ORTHO05D007244 7.3e-41 172.6 313 38.3
RcHm_v2.0_Chr5g0003141 Rosa chinensis HOM05D006136 ORTHO05D007244 3.2e-36 157.1 364 36.5
SMO367G1245 Selaginella moellendorffii HOM05D006136 ORTHO05D007244 3.4e-30 137.1 170 44.1
arahy.Tifrunner.gnm1.ann1.27MYTD Arachis hypogaea HOM05D006136 ORTHO05D007244 2.2e-29 134.4 136 51.5
Mapoly0169s0023 Marchantia polymorpha HOM05D006136 ORTHO05D007244 2.2e-29 134.4 194 42.8
arahy.Tifrunner.gnm1.ann1.QC7K1D Arachis hypogaea HOM05D006136 ORTHO05D007244 2.4e-28 131.0 92 67.4
arahy.Tifrunner.gnm1.ann1.Q88MA9 Arachis hypogaea HOM05D006136 ORTHO05D007244 2.0e-27 127.9 92 64.1
AagrBONN_evm.TU.Sc2ySwM_228.2439 Anthoceros agrestis HOM05D006136 ORTHO05D007244 2.3e-23 114.4 170 38.2
arahy.Tifrunner.gnm1.ann1.SWI1TY Arachis hypogaea HOM05D006136 ORTHO05D007244 2.0e-22 111.3 294 28.6
Glyma.07G231200 Glycine max HOM05D003235 ORTHO05D007244 2.4e-20 104.4 79 58.2
Pp3c1_8430 Physcomitrium patens HOM05D006136 ORTHO05D007244 3.2e-20 104.0 142 43.7
Hma1.2p1_2895F.1_g329976 Hydrangea macrophylla HOM05D006136 ORTHO05D007244 9.5e-17 92.4 58 75.9
Sed0020259 Sechium edule HOM05D006136 ORTHO05D007244 7.1e-12 76.3 243 30.5
TPR.G20669 Trifolium pratense HOM05D006136 ORTHO05D007244 1.6e-11 75.1 68 61.8
CBR_g39420 Chara braunii HOM05D006136 ORTHO05D007244 4.6e-11 73.6 149 35.6
BcaC03g14120 Brassica carinata HOM05D009052 ORTHO05D011796 5.1e-10 70.1 73 53.4
C02p13590 Brassica napus HOM05D006136 ORTHO05D007244 1.5e-09 68.6 73 53.4
BolC2t07471H Brassica oleracea HOM05D006136 ORTHO05D007244 1.5e-09 68.6 73 53.4
Hund03317 Selenicereus undatus HOM05D006136 ORTHO05D007244 3.6e-08 63.9 312 25.6
MBI16_g40728_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 6.2e-08 63.2 73 45.2
Cre14.g633400 Chlamydomonas reinhardtii HOM05D006136 ORTHO05D007244 1.5e-06 58.5 113 31.9


User provided reference genes

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