Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 4.2e-207 724.5 387 100.0
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 8.1e-203 710.3 404 92.6
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 5.2e-157 558.1 399 78.7
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 2.5e-151 539.3 441 70.1
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.4e-149 533.5 407 73.5
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 9.4e-143 510.8 390 69.5
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.6e-142 510.0 412 69.4
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.6e-142 510.0 379 73.4
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 2.1e-142 509.6 399 73.2
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.1e-142 509.6 396 70.2
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 8.8e-141 504.2 378 73.3
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 1.2e-140 503.8 385 68.8
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.8e-139 499.2 381 68.5
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.8e-139 499.2 381 68.5
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 4.8e-139 498.4 394 67.0
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 4.8e-139 498.4 384 67.4
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 6.3e-139 498.0 379 68.3
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.4e-138 496.1 381 68.2
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 4.1e-138 495.4 409 69.2
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 9.1e-138 494.2 381 68.2
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 9.1e-138 494.2 407 68.1
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 1.6e-137 493.4 398 70.4
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 1.6e-137 493.4 397 69.5
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.0e-137 493.0 388 70.1
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 2.7e-137 492.7 391 67.5
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 5.9e-137 491.5 380 69.5
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 5.9e-137 491.5 364 72.3
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.0e-136 490.7 394 69.5
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 1.0e-136 490.7 389 69.9
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.3e-136 489.6 405 66.7
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 3.8e-136 488.8 381 70.1
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 5.0e-136 488.4 392 70.7
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 5.0e-136 488.4 390 72.3
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 5.0e-136 488.4 372 73.4
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 6.6e-136 488.0 379 70.7
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 1.1e-135 487.3 399 65.4
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 3.3e-135 485.7 387 66.4
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 3.3e-135 485.7 395 66.3
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 4.2e-135 485.3 404 68.3
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 7.2e-135 484.6 428 63.6
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.2e-134 483.8 381 67.2
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 3.6e-134 482.3 388 67.0
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 8.0e-134 481.1 370 73.0
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.8e-133 479.9 365 74.0
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 5.2e-133 478.4 403 65.0
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 1.2e-132 477.2 365 74.8
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 1.5e-132 476.9 393 70.2
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 4.4e-132 475.3 398 63.8
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 2.8e-131 472.6 385 67.0
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 2.8e-131 472.6 392 69.9
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 3.7e-131 472.2 397 66.0
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 6.3e-131 471.5 380 66.3
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 6.3e-131 471.5 366 73.8
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 2.4e-130 469.5 377 67.9
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 2.7e-129 466.1 392 65.6
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 3.8e-128 462.2 317 73.2
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 5.6e-127 458.4 405 65.7
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.4e-125 453.8 393 63.4
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 2.3e-125 453.0 412 58.5
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.9e-125 451.1 385 65.2
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 1.2e-124 450.7 394 65.0
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.2e-124 450.7 400 63.8
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 7.5e-124 448.0 387 65.4
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 9.8e-124 447.6 403 60.8
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 9.8e-124 447.6 387 64.9
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 8.3e-123 444.5 271 81.5
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 8.3e-123 444.5 403 59.3
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.4e-122 443.7 378 62.2
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.4e-122 443.7 378 62.2
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 7.0e-122 441.4 421 58.7
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 1.2e-121 440.7 381 62.2
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.6e-121 440.3 385 60.5
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 3.5e-121 439.1 385 59.7
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 3.5e-121 439.1 377 61.5
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 3.5e-121 439.1 385 59.7
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 8.0e-118 427.9 378 61.9
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 1.5e-116 423.7 329 66.0
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 7.5e-116 421.4 297 73.7
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 2.2e-115 419.9 288 74.3
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 2.9e-115 419.5 386 59.1
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 4.1e-114 415.6 417 57.1
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 2.7e-113 412.9 228 87.3
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 8.6e-112 407.9 378 58.5
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.9e-111 406.8 291 76.3
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 2.5e-111 406.4 277 76.5
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 2.1e-110 403.3 404 60.6
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.2e-108 397.5 284 71.8
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 2.0e-108 396.7 404 57.2
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 3.4e-108 396.0 384 58.9
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.9e-106 390.2 301 69.4
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 4.6e-105 385.6 300 68.3
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 7.8e-105 384.8 405 56.8
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 6.6e-104 381.7 270 70.7
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 4.3e-103 379.0 296 67.6
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.0e-96 357.8 254 74.4
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 3.3e-95 352.8 402 54.7
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 2.4e-93 346.7 280 66.4
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 5.3e-93 345.5 377 51.5
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 4.9e-91 339.0 204 78.4
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 4.9e-91 339.0 246 73.6
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 1.9e-90 337.0 300 63.0
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.0e-88 331.3 397 52.9
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.7e-88 330.5 311 59.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 3.9e-88 329.3 198 83.3
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 9.6e-87 324.7 273 59.7
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.8e-80 303.9 233 67.0
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 3.9e-80 302.8 364 50.5
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 1.4e-69 267.7 149 83.2
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 5.8e-68 262.3 212 66.5
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.2e-65 254.6 254 58.7
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-64 251.1 292 53.4
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.5e-63 247.7 268 48.9
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.8e-61 240.7 197 57.9
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 1.7e-43 181.0 191 47.1
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.4e-40 171.4 316 35.1
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 8.8e-32 142.1 209 37.8
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 2.0e-31 141.0 158 53.2
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 2.2e-30 137.5 149 53.0
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 1.1e-21 108.6 70 78.6
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 5.4e-13 79.7 150 36.0
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 1.3e-11 75.1 89 52.8
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 6.1e-09 66.2 130 40.0
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 1.4e-08 65.1 34 88.2
Atru.chr11.1544 Acer truncatum HOM05D006305 ORTHO05D007984 1.7e-06 58.2 75 48.0


User provided reference genes

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