Gene: FAN14G5210

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN14G5210
  • Transcript Identifier FAN14G5210.1
  • Gene Type Coding gene
  • Location Fvb6-1 : 32776035-32782643 : negative

Gene Family Information

  • ID HOM05D006305
  • #Genes/#Species 126/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb6-1-snap-gene-327.70.v1.0.a1
  • pacid 50522797

Descriptions

  • Description K10664//K10849 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) // DNA excision repair protein ERCC-1 (ERCC1)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006294
ISO
PLAZA Integrative Orthologynucleotide-excision repair, preincision complex assembly AT3G05210
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT3G05210
GO:0010332
ISO
PLAZA Integrative Orthologyresponse to gamma radiation AT3G05210
GO:0010213
ISO
PLAZA Integrative Orthologynon-photoreactive DNA repair AT3G05210
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT3G05210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0017108
ISO
PLAZA Integrative Orthology5'-flap endonuclease activity AT3G05210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011335 Restriction endonuclease type II-like
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR004579 ERCC1/RAD10/SWI10 family
IPR010994 RuvA domain 2-like
Mapman id Description
14.6.4.2 DNA damage response.nucleotide excision repair (NER).XPF-ERCC1 DNA repair endonuclease complex.scaffolding component ERCC1
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase