Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0021232 PREDICTED: DNA excision repair protein ERCC-1 [Pyrus x bretschneideri] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G15590 LG-5 + View
Arabidopsis lyrata AL3G15630 scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.84BFE2 PTHR12749//PTHR12749:SF0 - EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1 // DNA EXCISION REPAIR PROTEIN ERCC-1 arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.39Z7HW K10849 - DNA excision repair protein ERCC-1 (ERCC1) arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT3G05210 nucleotide repair protein encodes a homolog of human ERCC1 protein (yeast RAD10)%2C which is a DNA repair endonuclease. Mutants are sensitive to UV-B and gamma radiation (G2 cell cycle phase arrest) and are defective in dark-repair of pyrimidine pyrimidone dimers. This protein incises the 5' end of damaged DNA%2C similar to ERCC1/RAD10. ERCC1%3B FUNCTIONS IN: 5'-flap endonuclease activity%3B INVOLVED IN: in 6 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-hairpin-helix DNA-binding motif%2C class 1 (InterPro:IPR003583)%2C DNA repair protein rad10 (InterPro:IPR004579)%2C RuvA domain 2-like (InterPro:IPR010994)%3B Has 658 Blast hits to 452 proteins in 188 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 166%3B Fungi - 153%3B Plants - 44%3B Viruses - 0%3B Other Eukaryotes - 291 (source: NCBI BLink). Chr3 + View
Beta vulgaris EL10Ac4g09328 K10849 - DNA excision repair protein ERCC-1 (ERCC1) Chr4_EL10_PGA_scaffold1 + View
Cannabis sativa CANSAT54G0217 NC_044375.1 + View
Corylus avellana Haze_04230 Similar to ERCC1: DNA excision repair protein ERCC-1 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc02_g33730 DNA excision repair protein ERCC-1 chr2 - View
Citrus clementina Ciclev10001229m.g scaffold_5 + View
Carpinus fangiana Cfa006552 Cfa02 + View
Cardamine hirsuta CARHR079550 DNA excision repair protein ERCC-1 Chr3 + View
Carya illinoinensis CiPaw.07G015100 K10849 - DNA excision repair protein ERCC-1 (ERCC1) Chr07 + View
Carica papaya Cpa.g.sc48.16 supercontig_48 + View
Chenopodium quinoa AUR62000888 ERCC1: DNA excision repair protein ERCC-1 C_Quinoa_Scaffold_2088 + View
Chenopodium quinoa AUR62005086 ERCC1: DNA excision repair protein ERCC-1 C_Quinoa_Scaffold_3820 - View
Capsella rubella Carub.0003s0446 K10849 - DNA excision repair protein ERCC-1 (ERCC1) scaffold_3 + View
Davidia involucrata Dinv23970 GWHABJS00000002 + View
Eucalyptus grandis Eucgr.H04470 Chr08 + View
Fragaria x ananassa FAN05G5097 K10849 - DNA excision repair protein ERCC-1 (ERCC1) Fvb6-3 - View
Fragaria x ananassa FAN14G0751 K10664//K10849 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) // DNA excision repair protein ERCC-1 (ERCC1) Fvb6-1 - View
Fragaria x ananassa FAN14G5210 K10664//K10849 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) // DNA excision repair protein ERCC-1 (ERCC1) Fvb6-1 - View
Fragaria x ananassa FAN05G0068 K10849 - DNA excision repair protein ERCC-1 (ERCC1) Fvb6-3 + View
Fragaria x ananassa FAN02G0061 PTHR12749//PTHR12749:SF0 - EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1 // DNA EXCISION REPAIR PROTEIN ERCC-1 Fvb6-4 + View
Fragaria vesca FvH4_6g05460 K10849 - DNA excision repair protein ERCC-1 (ERCC1) Fvb6 + View
Gossypium hirsutum Gohir.A13G173500 K10849 - DNA excision repair protein ERCC-1 (ERCC1) A13 + View
Gossypium hirsutum Gohir.D13G179200 K10849 - DNA excision repair protein ERCC-1 (ERCC1) D13 + View
Glycine max Glyma.20G232002 PTHR12749//PTHR12749:SF0 - EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1 // DNA EXCISION REPAIR PROTEIN ERCC-1 Gm20 + View
Glycine max Glyma.10G156300 K10849 - DNA excision repair protein ERCC-1 (ERCC1) Gm10 - View
Gossypium raimondii Gorai.013G204500 Chr13 + View
Hydrangea macrophylla Hma1.2p1_0666F.1_g199520 Hma1.2p1_0666F.1 + View
Lotus japonicus Lj5g0026498 K10849 - DNA excision repair protein ERCC-1 (ERCC1) chr5 - View
Lonicera japonica Lj9A683T26 GWHAAZE00000009 + View
Malus domestica MD04G1208500 nucleotide repair protein Chr04 - View
Manihot esculenta Manes.09G164300 Chromosome09 + View
Medicago truncatula Medtr1g082570 DNA excision repair protein ERCC-1 chr1 + View
Punica granatum PGR031G3204 NC_045127.1 - View
Prunus persica Prupe.6G329400 Pp06 - View
Phaseolus vulgaris Phvul.007G181700 K10849 - DNA excision repair protein ERCC-1 (ERCC1) Chr07 - View
Quercus lobata QL03p004578 3 + View
Rosa chinensis RcHm_v2.0_Chr3g0454231 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim05G0143900 chr05 - View
Salix brachista Sabra05G0037100 GWHAAZH00000005 - View
Schrenkiella parvula Sp3g04060 K10849 - DNA excision repair protein ERCC-1 (ERCC1) ch3-1 + View
Theobroma cacao Thecc.05G307300 DNA excision repair protein ERCC-1 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104820089 DNA excision repair protein ERCC-1 NW_010966177.1 + View
Tripterygium wilfordii TWI56G0624 NC_052242.1 + View
Vitis vinifera GSVIVG01000016001 chr14 + View