Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015351 Camellia sinensis var. sinensis HOM05D006734 ORTHO05D008580 1.1e-47 193.0 96 100.0
Dinv25724 Davidia involucrata HOM05D006734 ORTHO05D008580 1.1e-31 139.8 75 92.0
RcHm_v2.0_Chr2g0173311 Rosa chinensis HOM05D006734 ORTHO05D008580 4.1e-31 137.9 74 91.9
QL02p073991 Quercus lobata HOM05D006734 ORTHO05D008580 5.4e-31 137.5 74 90.5
Actinidia36125 Actinidia chinensis HOM05D006734 ORTHO05D008580 9.2e-31 136.7 74 90.5
Haze_14760 Corylus avellana HOM05D006734 ORTHO05D008580 1.2e-30 136.3 74 89.2
FvH4_6g51780 Fragaria vesca HOM05D006734 ORTHO05D008580 1.6e-30 136.0 74 90.5
FAN02G4451 Fragaria x ananassa HOM05D006734 ORTHO05D008580 1.6e-30 136.0 74 90.5
FAN14G0563 Fragaria x ananassa HOM05D006734 ORTHO05D008580 1.6e-30 136.0 74 90.5
Lalb_Chr02g0160561 Lupinus albus HOM05D006734 ORTHO05D008580 1.6e-30 136.0 74 90.5
FAN09G4334 Fragaria x ananassa HOM05D006734 ORTHO05D008580 2.0e-30 135.6 74 89.2
Nn3g16685 Nelumbo nucifera HOM05D006734 ORTHO05D008580 2.0e-30 135.6 74 90.5
Psat1g053400 Pisum sativum HOM05D006734 ORTHO05D008580 2.0e-30 135.6 74 90.5
GSVIVG01032383001 Vitis vinifera HOM05D006734 ORTHO05D008580 2.7e-30 135.2 74 89.2
Lj2g0015195 Lotus japonicus HOM05D006734 ORTHO05D008580 3.5e-30 134.8 74 90.5
Nitab4.5_0001562g0130 Nicotiana tabacum HOM05D006734 ORTHO05D008580 3.5e-30 134.8 74 90.5
ClCG09G019390 Citrullus lanatus HOM05D006734 ORTHO05D008580 4.6e-30 134.4 74 89.2
MELO3C021593.2 Cucumis melo HOM05D006734 ORTHO05D008580 4.6e-30 134.4 74 89.2
FAN05G5484 Fragaria x ananassa HOM05D006734 ORTHO05D008580 4.6e-30 134.4 74 89.2
Medtr6g004400 Medicago truncatula HOM05D006734 ORTHO05D008580 4.6e-30 134.4 74 89.2
TWI36G0664 Tripterygium wilfordii HOM05D006734 ORTHO05D008580 4.6e-30 134.4 74 89.2
Ca_04141_v3 Cicer arietinum L. HOM05D006734 ORTHO05D008580 6.0e-30 134.0 74 87.8
COL.COLO4_29173 Corchorus olitorius HOM05D006734 ORTHO05D008580 1.0e-29 133.3 74 87.8
Nitab4.5_0006683g0080 Nicotiana tabacum HOM05D006734 ORTHO05D008580 1.0e-29 133.3 74 89.2
Prupe.3G294000 Prunus persica HOM05D006734 ORTHO05D008580 1.0e-29 133.3 74 90.5
Cpa.g.sc108.78 Carica papaya HOM05D006734 ORTHO05D008580 1.3e-29 132.9 74 89.2
Rhsim10G0014500 Rhododendron simsii HOM05D006734 ORTHO05D008580 1.3e-29 132.9 76 84.2
Solyc02g093460.4 Solanum lycopersicum HOM05D006734 ORTHO05D008580 1.7e-29 132.5 74 87.8
Sopen02g038210 Solanum pennellii HOM05D006734 ORTHO05D008580 1.7e-29 132.5 74 87.8
CiPaw.04G029800 Carya illinoinensis HOM05D006734 ORTHO05D008580 2.3e-29 132.1 74 89.2
Lsat_1_v5_gn_4_184340 Lactuca sativa HOM05D006734 ORTHO05D008580 2.3e-29 132.1 74 85.1
Peaxi162Scf00129g01651 Petunia axillaris HOM05D006734 ORTHO05D008580 2.3e-29 132.1 74 86.5
Aqoxy3G01241 Aquilegia oxysepala HOM05D006734 ORTHO05D008580 3.0e-29 131.7 74 86.5
MD17G1022100 Malus domestica HOM05D006734 ORTHO05D008580 3.0e-29 131.7 74 89.2
Peaxi162Scf03028g00013 Petunia axillaris HOM05D006734 ORTHO05D008580 3.0e-29 131.7 74 86.5
PGR083G0596 Punica granatum HOM05D006734 ORTHO05D008580 3.0e-29 131.7 74 89.2
VMungo0464G0440 Vigna mungo HOM05D006734 ORTHO05D008580 3.0e-29 131.7 76 85.5
CAN.G473.21 Capsicum annuum HOM05D006734 ORTHO05D008580 3.9e-29 131.3 74 86.5
Sed0017476 Sechium edule HOM05D006734 ORTHO05D008580 3.9e-29 131.3 74 87.8
PGSC0003DMG400012609 Solanum tuberosum HOM05D006734 ORTHO05D008580 3.9e-29 131.3 74 86.5
Thecc.04G019600 Theobroma cacao HOM05D006734 ORTHO05D008580 3.9e-29 131.3 74 87.8
TAR622G1243 Trochodendron aralioides HOM05D006734 ORTHO05D008580 3.9e-29 131.3 74 86.5
SalBow1G2810 Salvia bowleyana HOM05D006734 ORTHO05D008580 5.0e-29 131.0 75 84.0
Ah.03g137010 Amaranthus hybridus HOM05D006734 ORTHO05D008580 6.6e-29 130.6 74 87.8
vmacro05878 Vaccinium macrocarpon HOM05D006734 ORTHO05D008580 6.6e-29 130.6 74 85.1
CsaV3_5G027020 Cucumis sativus L. HOM05D006734 ORTHO05D008580 8.6e-29 130.2 74 85.1
Glyma.05G002300 Glycine max HOM05D006734 ORTHO05D008580 8.6e-29 130.2 74 87.8
Gorai.012G065200 Gossypium raimondii HOM05D006734 ORTHO05D008580 8.6e-29 130.2 74 83.8
arahy.Tifrunner.gnm1.ann1.7L5D5L Arachis hypogaea HOM05D006734 ORTHO05D008580 1.1e-28 129.8 74 83.8
arahy.Tifrunner.gnm1.ann1.K7325H Arachis hypogaea HOM05D006734 ORTHO05D008580 1.1e-28 129.8 74 83.8
Migut.H00068 Erythranthe guttata HOM05D006734 ORTHO05D008580 1.1e-28 129.8 74 83.8
Gohir.A05G354600 Gossypium hirsutum HOM05D006734 ORTHO05D008580 1.1e-28 129.8 74 83.8
Gohir.D04G058500 Gossypium hirsutum HOM05D006734 ORTHO05D008580 1.1e-28 129.8 74 83.8
Phvul.004G004100 Phaseolus vulgaris HOM05D006734 ORTHO05D008580 1.1e-28 129.8 74 86.5
Lj7A601T102 Lonicera japonica HOM05D006734 ORTHO05D008580 1.5e-28 129.4 74 86.5
Manes.17G111000 Manihot esculenta HOM05D006734 ORTHO05D008580 1.9e-28 129.0 74 85.1
Peaxi162Scf01972g00023 Petunia axillaris HOM05D006734 ORTHO05D008580 1.9e-28 129.0 72 86.1
Ciclev10014883m.g Citrus clementina HOM05D006734 ORTHO05D008580 2.5e-28 128.6 74 86.5
Cc07_g00010 Coffea canephora HOM05D006734 ORTHO05D008580 2.5e-28 128.6 74 85.1
unitig_748.g6980 Utricularia gibba HOM05D006734 ORTHO05D008580 2.5e-28 128.6 74 83.8
MBI15_g36475_MAGBIO Magnolia biondii HOM05D006734 ORTHO05D008580 3.3e-28 128.3 74 83.8
AUR62028415 Chenopodium quinoa HOM05D006734 ORTHO05D008580 4.3e-28 127.9 74 85.1
DCAR_011261 Daucus carota HOM05D006734 ORTHO05D008580 5.6e-28 127.5 74 82.4
SGA_v2.0_scaffold18G08271 Striga asiatica HOM05D006734 ORTHO05D008580 5.6e-28 127.5 74 85.1
AL6G25190 Arabidopsis lyrata HOM05D006734 ORTHO05D008580 7.3e-28 127.1 74 83.8
CDE09G1408 Ceratophyllum demersum HOM05D006734 ORTHO05D008580 7.3e-28 127.1 74 83.8
AUR62041944 Chenopodium quinoa HOM05D006734 ORTHO05D008580 7.3e-28 127.1 74 82.4
ECA232G1420 Erigeron canadensis HOM05D006734 ORTHO05D008580 7.3e-28 127.1 74 83.8
EL10Ac6g14101 Beta vulgaris HOM05D006734 ORTHO05D008580 9.5e-28 126.7 74 85.1
Hund24869 Selenicereus undatus HOM05D006734 ORTHO05D008580 9.5e-28 126.7 74 85.1
Sc07g0007780 Simmondsia chinensis HOM05D006734 ORTHO05D008580 9.5e-28 126.7 74 83.8
Potri.001G343100 Populus trichocarpa HOM05D006734 ORTHO05D008580 1.2e-27 126.3 74 85.1
ATR0824G040 Amborella trichopoda HOM05D006734 ORTHO05D008580 1.6e-27 125.9 74 82.4
BcaC04g19033 Brassica carinata HOM05D006734 ORTHO05D008580 1.6e-27 125.9 74 82.4
C09p62720 Brassica napus HOM05D006734 ORTHO05D008580 1.6e-27 125.9 74 82.4
BolC9t59109H Brassica oleracea HOM05D006734 ORTHO05D008580 1.6e-27 125.9 74 82.4
CANSAT64G2114 Cannabis sativa HOM05D006734 ORTHO05D008580 1.6e-27 125.9 74 85.1
CARHR198850 Cardamine hirsuta HOM05D006734 ORTHO05D008580 1.6e-27 125.9 74 82.4
MSTRG.3137 Avicennia marina HOM05D006734 ORTHO05D008580 2.1e-27 125.6 74 81.1
BcaB08g36983 Brassica carinata HOM05D006734 ORTHO05D008580 2.1e-27 125.6 74 81.1
Carub.0006s1264 Capsella rubella HOM05D006734 ORTHO05D008580 2.1e-27 125.6 74 82.4
Eucgr.J02259 Eucalyptus grandis HOM05D006734 ORTHO05D008580 2.1e-27 125.6 74 81.1
Thhalv10013219m.g Eutrema salsugineum HOM05D006734 ORTHO05D008580 2.1e-27 125.6 74 82.4
Aa31LG11G15240 Aethionema arabicum HOM05D006734 ORTHO05D008580 2.8e-27 125.2 74 81.1
Atru.chr6.2432 Acer truncatum HOM05D006734 ORTHO05D008580 3.6e-27 124.8 74 82.4
BraA10t44473Z Brassica rapa HOM05D006734 ORTHO05D008580 3.6e-27 124.8 74 81.1
Os05g0108000 Oryza sativa ssp. japonica HOM05D006734 ORTHO05D008580 4.7e-27 124.4 74 82.4
PSO017G5381 Papaver somniferum HOM05D006734 ORTHO05D008580 4.7e-27 124.4 74 79.7
AT5G14460 Arabidopsis thaliana HOM05D006734 ORTHO05D008580 6.2e-27 124.0 74 82.4
BcaB08g36998 Brassica carinata HOM05D006734 ORTHO05D008580 6.2e-27 124.0 72 81.9
Sp6g29560 Schrenkiella parvula HOM05D006734 ORTHO05D008580 8.0e-27 123.6 74 79.7
Zm00001eb267110 Zea mays HOM05D006734 ORTHO05D008580 1.1e-26 123.2 74 78.4
HanXRQChr09g0255301 Helianthus annuus HOM05D006734 ORTHO05D008580 1.8e-26 122.5 74 79.7
Sabra16G0222500 Salix brachista HOM05D006734 ORTHO05D008580 3.1e-26 121.7 74 79.7
HPP92_004604 Vanilla planifolia HOM05D006734 ORTHO05D008580 3.4e-25 118.2 74 77.0
SHI03823 Sapria himalayana HOM05D006734 ORTHO05D008580 1.3e-24 116.3 76 73.7
SEGI_35368 Sequoiadendron giganteum HOM05D006734 ORTHO05D008580 2.9e-24 115.2 74 73.0
Cfa007337 Carpinus fangiana HOM05D006734 ORTHO05D008580 5.8e-17 90.9 74 68.9
CBR_g50116 Chara braunii HOM05D006734 ORTHO05D008580 5.8e-17 90.9 74 55.4
A10p24100 Brassica napus HOM05D000631 ORTHO05D008580 2.2e-16 89.0 53 77.4
AagrBONN_evm.TU.Sc2ySwM_228.5808 Anthoceros agrestis HOM05D006734 ORTHO05D008580 1.4e-15 86.3 69 53.6
Pp3c2_21370 Physcomitrium patens HOM05D006734 ORTHO05D008580 7.8e-14 80.5 70 54.3
Mapoly0093s0080 Marchantia polymorpha HOM05D006734 ORTHO05D008580 5.1e-13 77.8 69 49.3
SMO367G0030 Selaginella moellendorffii HOM05D006734 ORTHO05D008580 6.6e-13 77.4 70 50.0
Cre16.g690250 Chlamydomonas reinhardtii HOM05D006734 ORTHO05D008580 1.5e-12 76.3 70 50.0
PSO819G0001 Papaver somniferum HOM05D006734 ORTHO05D008580 1.5e-12 76.3 43 81.4
MCO16G576 Micromonas commoda HOM05D006734 ORTHO05D008580 2.8e-11 72.0 79 44.3
PSO718G0001 Papaver somniferum HOM05D006734 ORTHO05D008580 9.9e-09 63.5 37 81.1
DCAR_012964 Daucus carota HOM05D006734 ORTHO05D033711 1.7e-08 62.8 38 78.9
Oeu023268.1 Olea europaea HOM05D006734 ORTHO05D008580 1.2e-06 56.6 32 81.2


User provided reference genes

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