Gene: Lalb_Chr02g0160561

General Information

Structural Information

  • Species Lupinus albus
  • Gene Identifier Lalb_Chr02g0160561
  • Transcript Identifier Lalb_Chr02g0160561
  • Gene Type Coding gene
  • Location Lalb_Chr02 : 17935345-17940502 : positive

Gene Family Information

  • ID HOM05D006734
  • #Genes/#Species 119/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lalb_Chr02g0160561.v1
  • pacid 44553203
  • uniprot A0A6A5MVN6

Descriptions

  • Description K03177 - tRNA pseudouridine55 synthase [EC:5.4.99.25] (truB, PUS4, TRUB1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0009451
IEA
GOA DatabaseRNA modification
GO:0009451
IEA
InterProRNA modification
GO:0001522
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009982
IEA
GOA Databasepseudouridine synthase activity
GO:0009982
IEA
InterPropseudouridine synthase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G14460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014780 tRNA pseudouridine synthase II, TruB
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR002501 Pseudouridine synthase II, N-terminal
IPR032819 tRNA pseudouridylate synthase B, C-terminal
Mapman id Description
16.5.3.2 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruB)