Gene: A10p24100
General Information
Structural Information
- Species Brassica napus
- Gene Identifier A10p24100
- Transcript Identifier A10p24100
- Gene Type Coding gene
- Location A10 : 16762643-16766584 : positive
Gene Family Information
- ID HOM05D000631
- #Genes/#Species 901/98
- Phylogenetic origin
- ID ORTHO05D008580
- #Genes/#Species 117/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid A10p24100.1_BnaDAR
- v5 BnaA10g19290D
- single_cell_id A10p24100.1-BnaDAR
- ensembl GSBRNA2T00135593001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006396 | IEA | InterPro | RNA processing | |
GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
GO:0009451 | IEA | InterPro | RNA modification |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0009982 | IEA | InterPro | pseudouridine synthase activity |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR010734 | Copine, C-terminal |
IPR002035 | von Willebrand factor, type A |
IPR036465 | von Willebrand factor A-like domain superfamily |
IPR002501 | Pseudouridine synthase II, N-terminal |
IPR013083 | Zinc finger, RING/FYVE/PHD-type |
IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
Mapman id | Description |
---|---|
16.5.3.2 | RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruB) |
19.2.2.1.4.3.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase |
19.2.2.1.5.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.ligating E3 protein (RGLG) |