Gene: Thecc.04G019600

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.04G019600
  • Transcript Identifier Thecc.04G019600.1
  • Gene Type Coding gene
  • Location Chromosome_4 : 1293868-1297646 : positive

Gene Family Information

  • ID HOM05D006734
  • #Genes/#Species 119/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.04G019600.v2.1
  • pacid 42023489
  • ancestorIdentifier Thecc1EG016990.CGDv1.1
  • ancestorIdentifier Thecc1EG016990t1.CGDv1.1

Descriptions

  • Description Pseudouridine synthase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G14460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR014780 tRNA pseudouridine synthase II, TruB
IPR002501 Pseudouridine synthase II, N-terminal
IPR032819 tRNA pseudouridylate synthase B, C-terminal
Mapman id Description
16.5.3.2 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruB)