Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009551 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 4.1e-100 368.2 210 100.0
Dinv24425 Davidia involucrata HOM05D005935 ORTHO05D007012 7.6e-62 241.1 197 78.2
SGA_v2.0_scaffold81G26126 Striga asiatica HOM05D005935 ORTHO05D007012 8.7e-58 227.6 196 75.0
MSTRG.27950 Avicennia marina HOM05D005935 ORTHO05D007012 1.6e-56 223.4 196 74.5
Lsat_1_v5_gn_5_102820 Lactuca sativa HOM05D005935 ORTHO05D007012 4.8e-56 221.9 196 73.5
TAR362G1094 Trochodendron aralioides HOM05D005935 ORTHO05D007012 4.8e-56 221.9 197 74.1
SGA_v2.0_scaffold80G25879 Striga asiatica HOM05D005935 ORTHO05D007012 6.2e-56 221.5 196 73.0
Eucgr.H03282 Eucalyptus grandis HOM05D005935 ORTHO05D007012 1.8e-55 219.9 196 73.5
Sed0001365 Sechium edule HOM05D005935 ORTHO05D007012 2.4e-55 219.5 196 75.0
Cc02_g34830 Coffea canephora HOM05D005935 ORTHO05D007012 3.1e-55 219.2 196 73.0
GSVIVG01031220001 Vitis vinifera HOM05D005935 ORTHO05D007012 4.0e-55 218.8 197 73.1
ClCG02G015080 Citrullus lanatus HOM05D005935 ORTHO05D007012 6.9e-55 218.0 196 75.5
MELO3C004198.2 Cucumis melo HOM05D005935 ORTHO05D007012 6.9e-55 218.0 196 75.5
CsaV3_2G006940 Cucumis sativus L. HOM05D005935 ORTHO05D007012 1.2e-54 217.2 196 75.0
Prupe.6G314900 Prunus persica HOM05D005935 ORTHO05D007012 1.2e-54 217.2 196 74.0
Hma1.2p1_0008F-1.1_g005750 Hydrangea macrophylla HOM05D005935 ORTHO05D007012 1.5e-54 216.9 196 73.5
Manes.09G175700 Manihot esculenta HOM05D005935 ORTHO05D007012 2.6e-54 216.1 193 75.1
Nitab4.5_0000155g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 2.6e-54 216.1 189 72.5
SalBow3G1520 Salvia bowleyana HOM05D005935 ORTHO05D007012 5.8e-54 214.9 196 71.4
PGR031G1309 Punica granatum HOM05D005935 ORTHO05D007012 7.6e-54 214.5 192 71.9
Ah.06g188880 Amaranthus hybridus HOM05D005935 ORTHO05D007012 1.3e-53 213.8 196 70.4
Migut.N01391 Erythranthe guttata HOM05D005935 ORTHO05D007012 1.3e-53 213.8 197 71.6
vmacro01555 Vaccinium macrocarpon HOM05D005935 ORTHO05D007012 1.7e-53 213.4 239 62.3
Aqoxy2G00839 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 2.2e-53 213.0 197 73.6
HanXRQChr10g0299201 Helianthus annuus HOM05D005935 ORTHO05D007012 2.2e-53 213.0 196 74.0
EL10Ac4g09829 Beta vulgaris HOM05D005935 ORTHO05D007012 4.9e-53 211.8 197 72.1
MD04G1195100 Malus domestica HOM05D005935 ORTHO05D007012 4.9e-53 211.8 193 73.6
TAR636G0846 Trochodendron aralioides HOM05D005935 ORTHO05D007012 4.9e-53 211.8 197 73.6
CiPaw.07G028100 Carya illinoinensis HOM05D005935 ORTHO05D007012 6.4e-53 211.5 196 71.4
Nn3g21642 Nelumbo nucifera HOM05D005935 ORTHO05D007012 1.4e-52 210.3 187 71.7
Solyc01g100330.3 Solanum lycopersicum HOM05D005935 ORTHO05D007012 1.4e-52 210.3 196 69.9
Sopen01g043840 Solanum pennellii HOM05D005935 ORTHO05D007012 1.4e-52 210.3 196 69.9
VMungo1383G1193 Vigna mungo HOM05D005935 ORTHO05D007012 1.9e-52 209.9 196 70.4
Haze_04079 Corylus avellana HOM05D005935 ORTHO05D007012 2.4e-52 209.5 189 73.0
PGSC0003DMG400002806 Solanum tuberosum HOM05D005935 ORTHO05D007012 3.2e-52 209.1 196 69.4
CAN.G1715.16 Capsicum annuum HOM05D005935 ORTHO05D007012 4.2e-52 208.8 196 70.9
Glyma.19G228900 Glycine max HOM05D005935 ORTHO05D007012 4.2e-52 208.8 196 69.9
Phvul.001G225500 Phaseolus vulgaris HOM05D005935 ORTHO05D007012 5.4e-52 208.4 196 69.9
Ca_09298_v3 Cicer arietinum L. HOM05D005935 ORTHO05D007012 9.3e-52 207.6 196 69.4
RcHm_v2.0_Chr3g0456881 Rosa chinensis HOM05D005935 ORTHO05D007012 9.3e-52 207.6 192 71.9
FvH4_6g07240 Fragaria vesca HOM05D005935 ORTHO05D007012 1.2e-51 207.2 192 72.9
Sc09g0002670 Simmondsia chinensis HOM05D005935 ORTHO05D007012 1.6e-51 206.8 196 71.4
Aqoxy4G02482 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 2.1e-51 206.5 197 71.6
Peaxi162Scf00673g00126 Petunia axillaris HOM05D005935 ORTHO05D007012 2.1e-51 206.5 188 73.4
MD12G1207200 Malus domestica HOM05D005935 ORTHO05D007012 2.7e-51 206.1 192 72.9
Gohir.D08G223300 Gossypium hirsutum HOM05D005935 ORTHO05D007012 6.0e-51 204.9 192 70.8
Gorai.004G237200 Gossypium raimondii HOM05D005935 ORTHO05D007012 6.0e-51 204.9 192 70.8
arahy.Tifrunner.gnm1.ann1.I9BDFC Arachis hypogaea HOM05D005935 ORTHO05D007012 1.3e-50 203.8 196 67.9
Cpa.g.sc48.144 Carica papaya HOM05D005935 ORTHO05D007012 1.7e-50 203.4 192 71.4
Os03g0831900 Oryza sativa ssp. japonica HOM05D005935 ORTHO05D007012 1.7e-50 203.4 194 67.5
unitig_21.g20172 Utricularia gibba HOM05D005935 ORTHO05D007012 1.7e-50 203.4 197 71.1
arahy.Tifrunner.gnm1.ann1.7UDZ1N Arachis hypogaea HOM05D005935 ORTHO05D007012 2.3e-50 203.0 196 65.8
COL.COLO4_04140 Corchorus olitorius HOM05D005935 ORTHO05D007012 2.3e-50 203.0 192 69.3
Gohir.A08G206600 Gossypium hirsutum HOM05D005935 ORTHO05D007012 2.3e-50 203.0 192 70.3
Thecc.05G321000 Theobroma cacao HOM05D005935 ORTHO05D007012 3.0e-50 202.6 192 70.8
Atru.chr2.148 Acer truncatum HOM05D005935 ORTHO05D007012 5.1e-50 201.8 198 71.2
arahy.Tifrunner.gnm1.ann1.G5WI6L Arachis hypogaea HOM05D005935 ORTHO05D007012 6.6e-50 201.4 196 67.9
arahy.Tifrunner.gnm1.ann1.H1X696 Arachis hypogaea HOM05D005935 ORTHO05D007012 6.6e-50 201.4 196 67.9
Glyma.03G231900 Glycine max HOM05D005935 ORTHO05D007012 1.9e-49 199.9 196 67.9
Zm00001eb121760 Zea mays HOM05D005935 ORTHO05D007012 2.5e-49 199.5 193 66.3
Lj1g0021681 Lotus japonicus HOM05D005935 ORTHO05D007012 3.3e-49 199.1 193 69.9
Actinidia16851 Actinidia chinensis HOM05D005935 ORTHO05D007012 4.3e-49 198.7 187 73.3
CDE11G0767 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 4.3e-49 198.7 197 72.6
FAN05G5324 Fragaria x ananassa HOM05D005935 ORTHO05D007012 4.3e-49 198.7 201 69.2
SEGI_34613 Sequoiadendron giganteum HOM05D005935 ORTHO05D007012 4.3e-49 198.7 197 66.0
FAN14G3557 Fragaria x ananassa HOM05D005935 ORTHO05D007012 5.6e-49 198.4 201 69.2
ATR0767G209 Amborella trichopoda HOM05D005935 ORTHO05D007012 1.3e-48 197.2 197 68.0
FAN02G1619 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.3e-48 197.2 201 68.7
Psat3g013040 Pisum sativum HOM05D005935 ORTHO05D007012 1.6e-48 196.8 196 65.8
CDE05G0147 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 2.1e-48 196.4 197 71.6
Medtr7g112060 Medicago truncatula HOM05D005935 ORTHO05D007012 4.8e-48 195.3 192 68.8
ECA234G4853 Erigeron canadensis HOM05D005935 ORTHO05D007012 1.1e-47 194.1 195 67.2
TWI36G1229 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 1.1e-47 194.1 193 69.4
PSO170G3047 Papaver somniferum HOM05D005935 ORTHO05D007012 3.1e-47 192.6 188 73.9
PSO357G0321 Papaver somniferum HOM05D005935 ORTHO05D007012 3.1e-47 192.6 188 73.9
CANSAT54G1507 Cannabis sativa HOM05D005935 ORTHO05D007012 9.0e-47 191.0 198 67.7
QL03p018299 Quercus lobata HOM05D005935 ORTHO05D007012 9.0e-47 191.0 196 65.8
CARHR080230 Cardamine hirsuta HOM05D005935 ORTHO05D007012 1.2e-46 190.7 193 69.9
Potri.013G010300 Populus trichocarpa HOM05D005935 ORTHO05D007012 1.2e-46 190.7 194 70.1
FAN09G4449 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.5e-46 190.3 153 68.0
Duzib128G1094 Durio zibethinus HOM05D005935 ORTHO05D007012 3.4e-46 189.1 152 65.8
Nitab4.5_0000368g0260 Nicotiana tabacum HOM05D005935 ORTHO05D007012 3.4e-46 189.1 139 71.2
BolC5t34806H Brassica oleracea HOM05D002110 ORTHO05D007012 4.5e-46 188.7 191 65.4
BraA05t22944Z Brassica rapa HOM05D002110 ORTHO05D007012 4.5e-46 188.7 192 66.7
AUR62000683 Chenopodium quinoa HOM05D005935 ORTHO05D007012 4.5e-46 188.7 196 64.3
Lalb_Chr18g0046051 Lupinus albus HOM05D005935 ORTHO05D007012 4.5e-46 188.7 197 66.5
THA.LOC104802776 Tarenaya hassleriana HOM05D005935 ORTHO05D007012 4.5e-46 188.7 192 66.7
TWI56G1463 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 5.8e-46 188.3 193 68.4
QL01p019294 Quercus lobata HOM05D005935 ORTHO05D007012 7.6e-46 188.0 188 69.1
BcaC05g30089 Brassica carinata HOM05D005935 ORTHO05D007012 1.7e-45 186.8 192 65.1
Ciclev10002528m.g Citrus clementina HOM05D005935 ORTHO05D007012 2.2e-45 186.4 193 67.9
Nitab4.5_0013342g0020 Nicotiana tabacum HOM05D000001 ORTHO05D004269 2.9e-45 186.0 200 65.5
Lalb_Chr04g0260471 Lupinus albus HOM05D005935 ORTHO05D007012 3.8e-45 185.7 197 58.9
C05p61480 Brassica napus HOM05D002110 ORTHO05D007012 1.1e-44 184.1 193 68.4
Pp3c4_20180 Physcomitrium patens HOM05D005935 ORTHO05D007012 9.3e-44 181.0 194 65.5
HPP92_015241 Vanilla planifolia HOM05D005935 ORTHO05D007012 9.3e-44 181.0 186 68.8
PSO478G5244 Papaver somniferum HOM05D005935 ORTHO05D007012 1.2e-43 180.6 197 68.5
Rhsim11G0094200 Rhododendron simsii HOM05D005935 ORTHO05D007012 1.2e-43 180.6 189 56.1
Sp3g04650 Schrenkiella parvula HOM05D005935 ORTHO05D007012 1.2e-43 180.6 192 64.1
Carub.0003s0513 Capsella rubella HOM05D005935 ORTHO05D007012 4.6e-43 178.7 192 63.0
DCAR_005416 Daucus carota HOM05D005935 ORTHO05D007012 6.0e-43 178.3 157 76.4
AUR62005273 Chenopodium quinoa HOM05D005935 ORTHO05D007012 7.9e-43 177.9 183 66.7
BcaC05g29782 Brassica carinata HOM05D005935 ORTHO05D007012 1.0e-42 177.6 192 62.5
Mapoly0111s0002 Marchantia polymorpha HOM05D005935 ORTHO05D007012 1.3e-42 177.2 146 66.4
AT3G05760 Arabidopsis thaliana HOM05D005935 ORTHO05D007012 1.8e-42 176.8 192 63.5
CSS0047945 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 1.8e-42 176.8 159 76.1
AL3G16500 Arabidopsis lyrata HOM05D005935 ORTHO05D007012 3.0e-42 176.0 192 62.5
TPR.G1633 Trifolium pratense HOM05D005935 ORTHO05D007012 5.1e-42 175.3 192 63.5
AagrBONN_evm.TU.Sc2ySwM_344.1201 Anthoceros agrestis HOM05D005935 ORTHO05D007012 1.6e-40 170.2 149 60.4
AagrBONN_evm.TU.Sc2ySwM_228.1845 Anthoceros agrestis HOM05D005935 ORTHO05D007012 2.0e-38 163.3 145 59.3
Aa31LG5G16170 Aethionema arabicum HOM05D005935 ORTHO05D007012 2.2e-37 159.8 203 50.7
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 3.8e-37 159.1 132 64.4
Thhalv10022198m.g Eutrema salsugineum HOM05D005935 ORTHO05D007012 4.9e-37 158.7 268 47.4
CSS0024691 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 3.2e-36 156.0 148 62.8
SMO201G0167 Selaginella moellendorffii HOM05D005935 ORTHO05D007012 5.5e-36 155.2 198 56.1
Lj5A336T44 Lonicera japonica HOM05D005935 ORTHO05D007012 9.3e-36 154.5 110 73.6
Hund07136 Selenicereus undatus HOM05D005935 ORTHO05D007012 6.0e-35 151.8 288 46.9
Hund21747 Selenicereus undatus HOM05D005935 ORTHO05D007012 2.3e-34 149.8 189 60.8
Pp3c12_7700 Physcomitrium patens HOM05D005935 ORTHO05D007012 4.1e-31 139.0 161 67.1
CSS0031844 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 6.9e-31 138.3 126 63.5
Nitab4.5_0007747g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 1.3e-29 134.0 116 78.4
Oeu013219.2 Olea europaea HOM05D005935 ORTHO05D007012 1.3e-29 134.0 216 51.9
CSS0034550 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 3.2e-28 129.4 206 58.7
RcHm_v2.0_Chr7g0179971 Rosa chinensis HOM05D005935 ORTHO05D007012 3.5e-27 125.9 144 50.7
Sabra13G0008800 Salix brachista HOM05D005935 ORTHO05D007012 1.8e-23 113.6 238 34.5
CBR_g38440 Chara braunii HOM05D005935 ORTHO05D007012 2.5e-20 103.2 102 52.9
Cre07.g341650 Chlamydomonas reinhardtii HOM05D005935 ORTHO05D007012 9.4e-20 101.3 158 41.1
Actinidia35528 Actinidia chinensis HOM05D005935 ORTHO05D007012 6.1e-19 98.6 277 40.4
FAN04G2955 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.5e-14 84.0 143 41.3
MCO03G264 Micromonas commoda HOM05D005935 ORTHO05D007012 5.9e-14 82.0 137 40.9
Zm00001eb307900 Zea mays HOM05D005935 ORTHO05D007012 1.8e-10 70.5 86 68.6
PRCOL_00000245 Prasinoderma coloniale HOM05D005935 ORTHO05D007012 3.0e-10 69.7 202 35.1
Zm00001eb114570 Zea mays HOM05D005935 ORTHO05D007012 1.1e-09 67.8 83 69.9
Zm00001eb180860 Zea mays HOM05D005935 ORTHO05D007012 7.4e-09 65.1 44 72.7


User provided reference genes

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