Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 4.9e-143 511.1 261 100.0
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.2e-117 426.8 287 80.8
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.5e-104 383.3 256 77.7
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 6.4e-103 377.9 262 76.3
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 8.4e-103 377.5 259 75.3
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 2.3e-100 369.4 260 73.8
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 2.5e-99 365.9 260 74.2
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 3.3e-99 365.5 250 77.2
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.3e-98 363.6 260 73.8
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 3.7e-98 362.1 308 65.6
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.8e-96 354.8 260 70.8
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.7e-95 353.2 260 71.2
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.2e-94 349.0 257 70.8
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.2e-93 347.1 260 71.2
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.2e-93 347.1 260 71.2
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.6e-93 346.7 250 72.8
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.0e-93 344.7 268 69.0
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 8.7e-92 340.9 259 70.3
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 1.1e-91 340.5 258 67.8
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.1e-91 340.5 259 70.3
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 4.3e-91 338.6 255 67.8
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 5.7e-91 338.2 261 67.8
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 9.6e-91 337.4 260 70.0
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 2.1e-90 336.3 257 68.9
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.7e-90 335.5 258 67.8
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 3.7e-90 335.5 258 67.8
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 1.4e-89 333.6 258 67.1
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.4e-89 333.6 259 69.9
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 2.4e-89 332.8 271 67.2
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 3.1e-89 332.4 257 68.1
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 3.1e-89 332.4 259 70.7
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 9.0e-89 330.9 263 65.8
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.2e-88 330.5 229 73.8
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.2e-88 330.5 258 66.7
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 1.2e-88 330.5 262 67.9
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.5e-88 330.1 235 72.3
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 1.5e-88 330.1 288 62.8
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.5e-88 330.1 257 67.7
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 2.0e-88 329.7 255 65.9
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 2.6e-88 329.3 258 66.3
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.6e-88 329.3 255 65.9
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 5.9e-88 328.2 263 65.8
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 7.6e-88 327.8 263 65.4
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.3e-87 327.0 256 67.2
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 3.8e-87 325.5 258 65.9
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 3.8e-87 325.5 245 71.4
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 6.5e-87 324.7 255 64.7
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.1e-86 323.9 233 70.8
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 7.2e-86 321.2 262 64.9
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.6e-85 320.1 260 65.4
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 2.7e-85 319.3 257 68.1
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 4.6e-85 318.5 263 65.8
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 6.1e-85 318.2 261 65.9
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 1.8e-84 316.6 249 67.9
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.8e-84 316.6 242 69.0
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.3e-84 316.2 257 65.4
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.0e-84 315.8 236 69.1
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 3.0e-84 315.8 278 60.8
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.9e-84 315.5 266 66.2
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 5.1e-84 315.1 236 69.9
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 2.5e-83 312.8 259 63.7
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 5.7e-83 311.6 262 64.9
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.2e-82 309.7 282 59.6
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 8.2e-82 307.8 260 63.5
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 1.4e-81 307.0 261 62.8
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.1e-81 305.8 232 68.5
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.2e-80 303.9 259 65.6
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.5e-80 303.5 260 64.2
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.6e-80 302.8 259 63.7
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 3.4e-80 302.4 261 61.7
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.7e-79 300.1 260 63.5
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.2e-79 299.7 256 64.5
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 3.8e-79 298.9 257 65.4
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.4e-78 297.0 352 50.3
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 5.5e-78 295.0 259 62.5
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 3.9e-76 288.9 234 65.0
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 5.1e-76 288.5 270 61.1
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 8.8e-76 287.7 259 58.3
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 3.3e-75 285.8 239 62.3
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 3.3e-75 285.8 256 59.0
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 3.3e-75 285.8 259 58.7
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 7.4e-75 284.6 259 61.0
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.6e-72 276.2 256 60.5
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 3.4e-72 275.8 255 59.6
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.0e-71 274.2 261 57.1
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.4e-70 270.4 227 61.7
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.2e-70 269.2 258 58.1
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 4.2e-70 268.9 215 64.7
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 4.2e-70 268.9 215 64.7
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 7.2e-70 268.1 259 56.4
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 1.0e-68 264.2 261 58.6
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.5e-67 260.4 264 54.5
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 7.4e-67 258.1 218 65.6
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.4e-65 253.8 455 39.3
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.8e-65 253.4 181 68.0
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.1e-62 244.2 258 53.1
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.6e-61 240.4 282 49.3
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 5.2e-60 235.3 263 54.8
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 2.1e-53 213.4 260 49.6
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 1.0e-52 211.1 159 62.9
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 5.7e-51 205.3 140 69.3
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.4e-41 174.1 228 41.7
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 3.8e-39 166.0 260 43.8
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 8.0e-37 158.3 153 60.8
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 5.7e-35 152.1 98 67.3
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 5.4e-33 145.6 119 72.3
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 9.5e-30 134.8 238 35.3
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.4e-28 131.0 138 50.7
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 6.8e-28 128.6 98 59.2
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.9e-22 110.5 235 30.2
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 4.3e-22 109.4 235 32.8
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 7.3e-22 108.6 131 48.9
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.7e-18 97.4 93 52.7
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 3.7e-18 96.3 110 55.5
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.1e-17 94.7 128 54.7
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 6.0e-16 89.0 131 46.6
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 2.3e-15 87.0 173 34.7
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.1e-13 80.5 88 55.7
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 1.1e-12 78.2 86 53.5
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 9.9e-11 71.6 160 28.8
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 2.2e-10 70.5 58 58.6
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 6.6e-07 58.9 52 53.8


User provided reference genes

Program Settings