Gene: PGR004G0922

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR004G0922
  • Transcript Identifier PGR004G0922.09
  • Gene Type Coding gene
  • Location NC_045131.1 : 15312492-15314192 : positive

Gene Family Information

  • ID HOM05D006635
  • #Genes/#Species 121/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031397629.1
  • name LOC116208377
  • name XM_031541769.1
  • id gene-LOC116208377
  • uniprot A0A6P8DZ12

Descriptions

  • product DNA repair protein XRCC4-like, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006302
IEA
GOA Databasedouble-strand break repair
GO:0006302
IEA
InterProdouble-strand break repair
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G23100
GO:0008022
ISO
PLAZA Integrative Orthologyprotein C-terminus binding AT3G23100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038051 XRCC4-like, N-terminal domain superfamily
IPR010585 DNA repair protein XRCC4
Mapman id Description
14.4.3.2 DNA damage response.nonhomologous end-joining (NHEJ) repair.LIG4-XRCC4 ligase complex.component XRCC4