Gene: Zm00001eb056730
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb056730
- Transcript Identifier Zm00001eb056730_T001
- Gene Type Coding gene
- Location 1 : 281342871-281347440 : positive
Gene Family Information
- ID HOM05D006635
- #Genes/#Species 121/90
- Phylogenetic origin
- ID ORTHO05D008047
- #Genes/#Species 124/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb056730_T001
- pid Zm00001eb056730_P001
- uniprot B4G0P1
- uniprot A0A1D6L3M0
- uniprot A0A1D6L3L9
- uniprot A0A317YEC9
- V4_identifier Zm00001d033955
Descriptions
- Description Zm00001e005621
- Description DNA repair protein XRCC4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006302 | IEA | GOA Database | double-strand break repair | |
| GO:0006302 | IEA | InterPro | double-strand break repair | |
| GO:0006310 | IEA | GOA Database | DNA recombination | |
| GO:0006310 | IEA | InterPro | DNA recombination | |
| GO:0010165 | IBA | GOA Database | response to X-ray | |
| GO:0006303 | IBA | GOA Database | double-strand break repair via nonhomologous end joining | |
| GO:0051351 | IBA | GOA Database | positive regulation of ligase activity | |
| GO:0051103 | IBA | GOA Database | DNA ligation involved in DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G23100 |
| GO:0008022 | ISO | PLAZA Integrative Orthology | protein C-terminus binding | AT3G23100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005958 | IBA | GOA Database | DNA-dependent protein kinase-DNA ligase 4 complex | |
| GO:0032807 | IBA | GOA Database | DNA ligase IV complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.4.3.2 | DNA damage response.nonhomologous end-joining (NHEJ) repair.LIG4-XRCC4 ligase complex.component XRCC4 |