Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008695 Camellia sinensis var. sinensis HOM05D004988 ORTHO05D005845 4.9e-67 257.7 132 100.0
CSS0037829 Camellia sinensis var. sinensis HOM05D004988 ORTHO05D005845 2.1e-54 215.7 151 80.1
CSS0026270 Camellia sinensis var. sinensis HOM05D004988 ORTHO05D005845 2.4e-29 132.5 99 74.7
CSS0035479 Camellia sinensis var. sinensis HOM05D004988 ORTHO05D005845 2.4e-29 132.5 99 74.7
Actinidia35358 Actinidia chinensis HOM05D004988 ORTHO05D005845 9.1e-29 130.6 101 72.3
FAN25G1441 Fragaria x ananassa HOM05D004988 ORTHO05D005845 3.8e-27 125.2 102 65.7
Haze_09701 Corylus avellana HOM05D004988 ORTHO05D005845 1.4e-26 123.2 80 75.0
Dinv40770 Davidia involucrata HOM05D004988 ORTHO05D005845 5.5e-26 121.3 99 67.7
GSVIVG01037674001 Vitis vinifera HOM05D004988 ORTHO05D005845 1.6e-25 119.8 99 67.7
Gorai.009G440600 Gossypium raimondii HOM05D004988 ORTHO05D005845 4.7e-25 118.2 82 72.0
Thecc.07G033400 Theobroma cacao HOM05D004988 ORTHO05D005845 7.9e-25 117.5 101 65.3
Duzib213G0327 Durio zibethinus HOM05D004988 ORTHO05D005845 1.4e-24 116.7 99 65.7
VMungo0647G1120 Vigna mungo HOM05D004988 ORTHO05D005845 1.8e-24 116.3 99 63.6
FAN16G3602 Fragaria x ananassa HOM05D004988 ORTHO05D005845 3.9e-24 115.2 121 56.2
LjContig00272g0019234 Lotus japonicus HOM05D004988 ORTHO05D005845 3.9e-24 115.2 99 62.6
Ciclev10010304m.g Citrus clementina HOM05D004988 ORTHO05D005845 5.1e-24 114.8 99 64.6
Atru.chr1.2791 Acer truncatum HOM05D004988 ORTHO05D005845 8.8e-24 114.0 99 64.6
Aqoxy1G03129 Aquilegia oxysepala HOM05D004988 ORTHO05D005845 1.1e-23 113.6 99 61.6
Hma1.2p1_0036F.1_g023500 Hydrangea macrophylla HOM05D004988 ORTHO05D005845 1.1e-23 113.6 101 63.4
Migut.M01745 Erythranthe guttata HOM05D004988 ORTHO05D005845 1.5e-23 113.2 99 62.6
FAN21G3129 Fragaria x ananassa HOM05D004988 ORTHO05D005845 1.5e-23 113.2 120 55.8
Hma1.2p1_0036F.1_g023490 Hydrangea macrophylla HOM05D004988 ORTHO05D005845 1.5e-23 113.2 99 64.6
Nn1g03486 Nelumbo nucifera HOM05D004988 ORTHO05D005845 1.5e-23 113.2 99 60.6
Lalb_Chr04g0248341 Lupinus albus HOM05D004988 ORTHO05D005845 2.6e-23 112.5 99 59.6
Prupe.4G216500 Prunus persica HOM05D004988 ORTHO05D005845 3.3e-23 112.1 120 56.7
Sed0003845 Sechium edule HOM05D004988 ORTHO05D005845 3.3e-23 112.1 129 49.6
Psat2g012000 Pisum sativum HOM05D004988 ORTHO05D005845 4.4e-23 111.7 99 61.6
TAR626G1959 Trochodendron aralioides HOM05D004988 ORTHO05D005845 5.7e-23 111.3 98 61.2
CsaV3_3G004590 Cucumis sativus L. HOM05D004988 ORTHO05D005845 9.7e-23 110.5 101 60.4
RcHm_v2.0_Chr5g0040391 Rosa chinensis HOM05D004988 ORTHO05D005845 9.7e-23 110.5 99 61.6
Cfa020320 Carpinus fangiana HOM05D004988 ORTHO05D005845 1.3e-22 110.2 99 60.6
arahy.Tifrunner.gnm1.ann1.E8M5A0 Arachis hypogaea HOM05D004988 ORTHO05D005845 1.7e-22 109.8 99 60.6
arahy.Tifrunner.gnm1.ann1.ZUJ4QN Arachis hypogaea HOM05D004988 ORTHO05D005845 1.7e-22 109.8 99 60.6
FAN11G0321 Fragaria x ananassa HOM05D004988 ORTHO05D005845 2.8e-22 109.0 122 53.3
FvH4_3g23000 Fragaria vesca HOM05D004988 ORTHO05D005845 3.7e-22 108.6 120 54.2
TPR.G1199 Trifolium pratense HOM05D004988 ORTHO05D005845 3.7e-22 108.6 99 59.6
MD11G1214700 Malus domestica HOM05D004988 ORTHO05D005845 4.8e-22 108.2 99 61.6
Oeu062583.1 Olea europaea HOM05D004988 ORTHO05D005845 4.8e-22 108.2 99 61.6
Glyma.14G022400 Glycine max HOM05D004988 ORTHO05D005845 6.3e-22 107.8 99 61.6
CANSAT11G0463 Cannabis sativa HOM05D004988 ORTHO05D005845 1.4e-21 106.7 99 61.6
Gohir.D05G372400 Gossypium hirsutum HOM05D004988 ORTHO05D005845 1.4e-21 106.7 101 58.4
Ca_06330_v3 Cicer arietinum L. HOM05D004988 ORTHO05D005845 2.4e-21 105.9 99 58.6
Ca_30701_v3 Cicer arietinum L. HOM05D004988 ORTHO05D005845 2.4e-21 105.9 99 58.6
Sc16g0005920 Simmondsia chinensis HOM05D004988 ORTHO05D005845 2.4e-21 105.9 99 57.6
Medtr5g093110 Medicago truncatula HOM05D004988 ORTHO05D005845 4.1e-21 105.1 99 59.6
Sabra11G0073600 Salix brachista HOM05D004988 ORTHO05D005845 4.1e-21 105.1 101 58.4
Sabra11G0079200 Salix brachista HOM05D004988 ORTHO05D005845 4.1e-21 105.1 101 58.4
TWI38G0959 Tripterygium wilfordii HOM05D004988 ORTHO05D005845 4.1e-21 105.1 155 43.9
Potri.011G089500 Populus trichocarpa HOM05D004988 ORTHO05D005845 5.3e-21 104.8 99 59.6
Lsat_1_v5_gn_9_90520 Lactuca sativa HOM05D004988 ORTHO05D005845 9.1e-21 104.0 80 65.0
Gohir.A04G013900 Gossypium hirsutum HOM05D004988 ORTHO05D005845 3.4e-20 102.1 101 55.4
Eucgr.F00744 Eucalyptus grandis HOM05D004988 ORTHO05D005845 1.0e-19 100.5 99 59.6
CAN.G1568.1 Capsicum annuum HOM05D004988 ORTHO05D005845 1.3e-19 100.1 99 56.6
CiPaw.11G191700 Carya illinoinensis HOM05D004988 ORTHO05D005845 1.7e-19 99.8 99 57.6
THA.LOC104817863 Tarenaya hassleriana HOM05D004988 ORTHO05D005845 2.2e-19 99.4 99 58.6
FAN25G2375 Fragaria x ananassa HOM05D004988 ORTHO05D005845 3.8e-19 98.6 109 54.1
AL3G34200 Arabidopsis lyrata HOM05D004988 ORTHO05D005845 5.0e-19 98.2 99 56.6
AT3G20475 Arabidopsis thaliana HOM05D004988 ORTHO05D005845 5.0e-19 98.2 99 56.6
Thhalv10022259m.g Eutrema salsugineum HOM05D004988 ORTHO05D005845 5.0e-19 98.2 99 56.6
HanXRQChr03g0079751 Helianthus annuus HOM05D004988 ORTHO05D005845 5.0e-19 98.2 99 54.5
HanXRQChr03g0079801 Helianthus annuus HOM05D004988 ORTHO05D005845 5.0e-19 98.2 99 54.5
HanXRQChr05g0152621 Helianthus annuus HOM05D004988 ORTHO05D005845 5.0e-19 98.2 99 54.5
Cc05_g13960 Coffea canephora HOM05D004988 ORTHO05D005845 8.5e-19 97.4 101 53.5
CARHR096230 Cardamine hirsuta HOM05D004988 ORTHO05D005845 1.1e-18 97.1 99 56.6
Sp3g18490 Schrenkiella parvula HOM05D004988 ORTHO05D005845 1.1e-18 97.1 99 55.6
SGA_v2.0_scaffold36G14386 Striga asiatica HOM05D004988 ORTHO05D005845 1.1e-18 97.1 98 55.1
Manes.03G131500 Manihot esculenta HOM05D004988 ORTHO05D005845 1.4e-18 96.7 99 58.6
ECA240G2090 Erigeron canadensis HOM05D004988 ORTHO05D005845 2.5e-18 95.9 99 53.5
Carub.0003s2042 Capsella rubella HOM05D004988 ORTHO05D005845 4.2e-18 95.1 98 54.1
PGR083G2184 Punica granatum HOM05D004988 ORTHO05D005845 4.2e-18 95.1 112 52.7
A05p28340 Brassica napus HOM05D000284 ORTHO05D005845 9.4e-18 94.0 99 53.5
BolC5t33100H Brassica oleracea HOM05D004988 ORTHO05D005845 9.4e-18 94.0 99 53.5
PSO541G0855 Papaver somniferum HOM05D004988 ORTHO05D005845 9.4e-18 94.0 111 48.6
Sopen10g008290 Solanum pennellii HOM05D004988 ORTHO05D005845 1.6e-17 93.2 99 53.5
Phvul.008G268900 Phaseolus vulgaris HOM05D004988 ORTHO05D005845 1.0e-16 90.5 96 56.2
Aa31LG8G7300 Aethionema arabicum HOM05D004988 ORTHO05D005845 1.4e-16 90.1 91 57.1
C05p43830 Brassica napus HOM05D000284 ORTHO05D005845 3.0e-16 89.0 99 51.5
EL10Ac4g07775 Beta vulgaris HOM05D004988 ORTHO05D005845 3.9e-16 88.6 100 49.0
vmacro09701 Vaccinium macrocarpon HOM05D004988 ORTHO05D005845 5.2e-16 88.2 53 81.1
unitig_578.g15992 Utricularia gibba HOM05D004988 ORTHO05D005845 1.5e-15 86.7 139 36.7
RhsimUnG0249000 Rhododendron simsii HOM05D004988 ORTHO05D005845 7.4e-15 84.3 52 82.7
Os05g0498300 Oryza sativa ssp. japonica HOM05D004988 ORTHO05D005845 9.7e-15 84.0 99 46.5
MELO3C032293.2 Cucumis melo HOM05D004988 ORTHO05D005845 2.8e-14 82.4 83 50.6
ClCG10G004940 Citrullus lanatus HOM05D004988 ORTHO05D005845 3.7e-14 82.0 53 75.5
ATR0794G119 Amborella trichopoda HOM05D004988 ORTHO05D005845 9.1e-13 77.4 99 45.5
QL08p009463 Quercus lobata HOM05D004988 ORTHO05D005845 4.5e-12 75.1 50 74.0
Hund02015 Selenicereus undatus HOM05D004988 ORTHO05D005845 2.9e-11 72.4 52 69.2
BraA05t21720Z Brassica rapa HOM05D004988 ORTHO05D005845 3.8e-11 72.0 77 51.9
BcaNung06350 Brassica carinata HOM05D004988 ORTHO05D005845 3.2e-10 68.9 64 54.7
Peaxi162Scf00350g00216 Petunia axillaris HOM05D004988 ORTHO05D005845 7.2e-10 67.8 50 64.0
PGR083G0916 Punica granatum HOM05D004988 ORTHO05D005845 6.1e-09 64.7 53 62.3
DCAR_009454 Daucus carota HOM05D004988 ORTHO05D005845 8.0e-09 64.3 50 64.0
Solyc10g018530.2 Solanum lycopersicum HOM05D004988 ORTHO05D005845 1.0e-08 63.9 53 56.6
AUR62015808 Chenopodium quinoa HOM05D004988 ORTHO05D005845 6.7e-08 61.2 50 58.0
AUR62020409 Chenopodium quinoa HOM05D004988 ORTHO05D005845 8.8e-08 60.8 50 56.0
QL08p009451 Quercus lobata HOM05D004988 ORTHO05D005845 8.2e-06 54.3 29 86.2


User provided reference genes

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