Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 5.2e-66 254.2 127 100.0
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 5.2e-66 254.2 127 100.0
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 1.3e-61 239.6 126 92.9
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 1.6e-59 232.6 126 88.1
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 2.1e-59 232.3 126 89.7
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 8.1e-59 230.3 126 86.5
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 1.2e-57 226.5 126 85.7
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 1.2e-57 226.5 126 85.7
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 3.4e-57 224.9 126 84.1
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 4.4e-57 224.6 126 84.9
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 4.4e-57 224.6 126 85.7
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 7.6e-57 223.8 126 84.9
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 1.3e-56 223.0 126 84.9
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 1.7e-56 222.6 126 84.1
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 4.9e-56 221.1 126 84.9
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 6.4e-56 220.7 126 84.1
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 8.4e-56 220.3 126 84.9
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 1.1e-55 219.9 126 84.1
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 1.1e-55 219.9 126 82.5
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 1.1e-55 219.9 126 83.3
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 3.2e-55 218.4 126 81.7
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 4.1e-55 218.0 126 81.0
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 7.1e-55 217.2 126 81.0
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 9.2e-55 216.9 126 81.0
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 1.2e-54 216.5 126 81.0
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 1.2e-54 216.5 126 80.2
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 1.2e-54 216.5 126 80.2
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 2.1e-54 215.7 126 80.2
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 2.1e-54 215.7 126 79.4
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 2.7e-54 215.3 126 81.0
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 2.7e-54 215.3 126 82.5
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 2.7e-54 215.3 126 87.3
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 3.5e-54 214.9 126 81.0
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 6.0e-54 214.2 126 83.3
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 7.8e-54 213.8 126 80.2
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 7.8e-54 213.8 126 82.5
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 7.8e-54 213.8 126 79.4
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 1.0e-53 213.4 126 81.0
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.3e-53 213.0 126 78.6
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.3e-53 213.0 126 78.6
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 1.3e-53 213.0 126 80.2
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 2.3e-53 212.2 126 78.6
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 3.0e-53 211.8 126 77.8
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 5.1e-53 211.1 126 77.8
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 6.6e-53 210.7 126 77.8
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 8.7e-53 210.3 126 80.2
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 8.7e-53 210.3 126 80.2
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 1.1e-52 209.9 126 79.4
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 1.1e-52 209.9 126 79.4
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 1.1e-52 209.9 126 77.8
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 1.9e-52 209.1 126 77.0
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 3.3e-52 208.4 126 81.0
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 4.3e-52 208.0 126 77.0
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 4.3e-52 208.0 118 83.9
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 4.3e-52 208.0 126 78.6
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 7.3e-52 207.2 126 77.0
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 9.6e-52 206.8 126 78.6
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 1.2e-51 206.5 126 77.8
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 1.6e-51 206.1 126 76.2
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 1.6e-51 206.1 126 76.2
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 2.1e-51 205.7 126 77.8
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 2.8e-51 205.3 126 77.8
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 2.8e-51 205.3 126 78.6
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 8.1e-51 203.8 126 79.4
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 1.8e-50 202.6 126 77.8
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 1.8e-50 202.6 121 81.0
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 3.1e-50 201.8 122 77.9
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 3.1e-50 201.8 127 79.5
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 4.0e-50 201.4 126 76.2
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 2.6e-49 198.7 126 75.4
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 3.4e-49 198.4 126 75.4
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 4.4e-49 198.0 126 75.4
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 7.6e-49 197.2 126 77.0
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 1.7e-48 196.1 126 74.6
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 1.7e-48 196.1 126 74.6
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 2.2e-48 195.7 126 74.6
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 2.2e-48 195.7 126 74.6
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 2.2e-48 195.7 186 57.5
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 3.8e-48 194.9 126 74.6
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 4.9e-48 194.5 126 76.2
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 8.4e-48 193.7 126 73.0
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 1.9e-47 192.6 126 73.8
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 4.2e-47 191.4 135 71.9
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 4.2e-47 191.4 135 71.9
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 9.3e-47 190.3 126 73.0
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 1.6e-46 189.5 126 72.2
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 2.7e-46 188.7 126 74.6
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 3.5e-46 188.3 127 72.4
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.0e-45 186.8 126 73.8
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 2.3e-45 185.7 126 74.6
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 6.6e-45 184.1 126 71.4
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 1.1e-44 183.3 151 62.3
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 4.3e-44 181.4 144 64.6
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 2.4e-42 175.6 126 65.1
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 2.0e-41 172.6 108 78.7
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 3.4e-41 171.8 126 72.2
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 4.5e-41 171.4 126 69.8
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 4.5e-41 171.4 126 69.8
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.9e-40 168.7 126 68.3
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 1.0e-37 160.2 123 68.3
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 2.3e-37 159.1 93 82.8
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 3.9e-37 158.3 120 65.8
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 2.6e-33 145.6 117 58.1
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 2.7e-30 135.6 127 53.5
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 6.7e-29 131.0 89 75.3
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 1.3e-27 126.7 114 53.5
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 2.0e-25 119.4 73 75.3
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 2.0e-25 119.4 73 79.5
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 3.4e-25 118.6 108 62.0
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.0e-24 117.1 127 48.0
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 1.4e-23 113.2 70 78.6
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 1.0e-21 107.1 133 48.9
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 3.3e-20 102.1 75 74.7
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 2.2e-19 99.4 53 83.0
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 5.9e-17 91.3 53 73.6
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 3.8e-16 88.6 53 73.6


User provided reference genes

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