Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007841 Camellia sinensis var. sinensis HOM05D001061 ORTHO05D006881 6.4e-94 347.4 179 100.0
CSS0050177 Camellia sinensis var. sinensis HOM05D001061 ORTHO05D006881 4.0e-19 99.0 127 48.0
Rhsim08G0137000 Rhododendron simsii HOM05D001061 ORTHO05D006881 2.0e-18 96.7 132 47.7
Psat4g043480 Pisum sativum HOM05D001061 ORTHO05D006881 7.5e-18 94.7 130 46.2
Lj5C145G2 Lonicera japonica HOM05D001061 ORTHO05D006881 9.8e-18 94.4 127 46.5
Actinidia31031 Actinidia chinensis HOM05D001061 ORTHO05D006881 2.2e-17 93.2 127 44.9
Ca_02537_v3 Cicer arietinum L. HOM05D001061 ORTHO05D006881 2.2e-17 93.2 127 45.7
Dinv36905 Davidia involucrata HOM05D001061 ORTHO05D006881 2.2e-17 93.2 127 45.7
Manes.01G020600 Manihot esculenta HOM05D001061 ORTHO05D006881 3.7e-17 92.4 127 45.7
Medtr4g111945 Medicago truncatula HOM05D001061 ORTHO05D006881 6.3e-17 91.7 127 45.7
vmacro17676 Vaccinium macrocarpon HOM05D001061 ORTHO05D006881 6.3e-17 91.7 127 45.7
TPR.G26764 Trifolium pratense HOM05D001061 ORTHO05D006881 1.1e-16 90.9 126 46.0
Haze_18615 Corylus avellana HOM05D001061 ORTHO05D006881 1.4e-16 90.5 117 48.7
Lj4g0007114 Lotus japonicus HOM05D001061 ORTHO05D006881 1.4e-16 90.5 127 44.9
CANSAT80G1355 Cannabis sativa HOM05D001061 ORTHO05D006881 2.4e-16 89.7 127 44.9
Sc10g0009570 Simmondsia chinensis HOM05D001061 ORTHO05D006881 2.4e-16 89.7 127 44.1
Glyma.17G121400 Glycine max HOM05D001061 ORTHO05D006881 3.1e-16 89.4 127 43.3
Hma1.2p1_0340F.1_g129890 Hydrangea macrophylla HOM05D001061 ORTHO05D006881 3.1e-16 89.4 127 44.1
TWI15G0827 Tripterygium wilfordii HOM05D001061 ORTHO05D006881 3.1e-16 89.4 127 44.1
Duzib205G1584 Durio zibethinus HOM05D001061 ORTHO05D006881 4.1e-16 89.0 127 44.1
Eucgr.B00700 Eucalyptus grandis HOM05D001061 ORTHO05D006881 4.1e-16 89.0 127 44.9
Phvul.003G177100 Phaseolus vulgaris HOM05D001061 ORTHO05D006881 4.1e-16 89.0 127 44.1
Potri.012G060000 Populus trichocarpa HOM05D001061 ORTHO05D006881 4.1e-16 89.0 127 44.1
AUR62032190 Chenopodium quinoa HOM05D001061 ORTHO05D006881 5.4e-16 88.6 127 43.3
AUR62036955 Chenopodium quinoa HOM05D001061 ORTHO05D006881 5.4e-16 88.6 127 43.3
Aqoxy3G03903 Aquilegia oxysepala HOM05D001061 ORTHO05D006881 7.0e-16 88.2 127 43.3
EL10Ac5g11250 Beta vulgaris HOM05D001061 ORTHO05D006881 7.0e-16 88.2 127 42.5
AUR62043676 Chenopodium quinoa HOM05D001061 ORTHO05D006881 9.1e-16 87.8 94 54.3
Thhalv10020006m.g Eutrema salsugineum HOM05D001061 ORTHO05D006881 9.1e-16 87.8 127 43.3
MELO3C017287.2 Cucumis melo HOM05D001061 ORTHO05D006881 1.2e-15 87.4 127 44.1
Aa31LG8G5400 Aethionema arabicum HOM05D001061 ORTHO05D006881 1.6e-15 87.0 127 42.5
CARHR093910 Cardamine hirsuta HOM05D001061 ORTHO05D006881 1.6e-15 87.0 127 42.5
CiPaw.15G126900 Carya illinoinensis HOM05D001061 ORTHO05D006881 1.6e-15 87.0 127 44.1
CsaV3_1G003630 Cucumis sativus L. HOM05D001061 ORTHO05D006881 1.6e-15 87.0 127 44.1
AT3G18524 Arabidopsis thaliana HOM05D001061 ORTHO05D006881 2.0e-15 86.7 127 42.5
Carub.0003s1832 Capsella rubella HOM05D001061 ORTHO05D006881 2.0e-15 86.7 127 42.5
Ciclev10018746m.g Citrus clementina HOM05D001061 ORTHO05D006881 2.0e-15 86.7 127 42.5
VMungo1215G1249 Vigna mungo HOM05D001061 ORTHO05D006881 2.0e-15 86.7 127 42.5
AL3G31850 Arabidopsis lyrata HOM05D001061 ORTHO05D006881 2.7e-15 86.3 127 41.7
Nn4g23718 Nelumbo nucifera HOM05D001061 ORTHO05D006881 2.7e-15 86.3 127 43.3
Lalb_Chr13g0302331 Lupinus albus HOM05D001061 ORTHO05D006881 3.5e-15 85.9 127 42.5
Sed0003655 Sechium edule HOM05D001061 ORTHO05D006881 3.5e-15 85.9 127 43.3
arahy.Tifrunner.gnm1.ann1.ERX1RE Arachis hypogaea HOM05D001061 ORTHO05D006881 4.5e-15 85.5 92 54.3
ClCG06G015030 Citrullus lanatus HOM05D001061 ORTHO05D006881 4.5e-15 85.5 127 43.3
DCAR_023182 Daucus carota HOM05D001061 ORTHO05D006881 4.5e-15 85.5 92 51.1
ECA246G2868 Erigeron canadensis HOM05D001061 ORTHO05D006881 4.5e-15 85.5 127 43.3
Sabra12G0043000 Salix brachista HOM05D001061 ORTHO05D006881 4.5e-15 85.5 127 42.5
Sp3g16620 Schrenkiella parvula HOM05D001061 ORTHO05D006881 4.5e-15 85.5 127 41.7
BcaB04g18987 Brassica carinata HOM05D001061 ORTHO05D006881 5.9e-15 85.1 127 40.9
BcaC01g03695 Brassica carinata HOM05D001061 ORTHO05D006881 5.9e-15 85.1 127 40.9
A03p40700 Brassica napus HOM05D001061 ORTHO05D006881 5.9e-15 85.1 127 40.9
C03p49490 Brassica napus HOM05D001061 ORTHO05D006881 5.9e-15 85.1 127 40.9
BolC3t17247H Brassica oleracea HOM05D001061 ORTHO05D006881 5.9e-15 85.1 127 40.9
BraA03t13227Z Brassica rapa HOM05D001061 ORTHO05D006881 5.9e-15 85.1 127 40.9
HanXRQChr05g0153891 Helianthus annuus HOM05D001061 ORTHO05D006881 5.9e-15 85.1 127 43.3
Cc04_g07520 Coffea canephora HOM05D001061 ORTHO05D006881 1.0e-14 84.3 127 42.5
Migut.I00396 Erythranthe guttata HOM05D001061 ORTHO05D006881 1.0e-14 84.3 127 43.3
Gohir.A09G046500 Gossypium hirsutum HOM05D001061 ORTHO05D006881 1.3e-14 84.0 127 43.3
Lalb_Chr12g0197571 Lupinus albus HOM05D001061 ORTHO05D006881 1.3e-14 84.0 127 43.3
Lsat_1_v5_gn_5_25080 Lactuca sativa HOM05D001061 ORTHO05D006881 1.7e-14 83.6 127 42.5
Zm00001eb326520 Zea mays HOM05D001061 ORTHO05D006881 1.7e-14 83.6 127 40.9
arahy.Tifrunner.gnm1.ann1.J2PRY0 Arachis hypogaea HOM05D001061 ORTHO05D006881 2.2e-14 83.2 92 53.3
FvH4_5g12700 Fragaria vesca HOM05D001061 ORTHO05D006881 2.2e-14 83.2 127 43.3
FAN08G1716 Fragaria x ananassa HOM05D001061 ORTHO05D006881 2.2e-14 83.2 127 43.3
FAN18G1105 Fragaria x ananassa HOM05D001061 ORTHO05D006881 2.2e-14 83.2 127 43.3
FAN18G1805 Fragaria x ananassa HOM05D001061 ORTHO05D006881 2.2e-14 83.2 127 43.3
PSO782G4375 Papaver somniferum HOM05D001061 ORTHO05D006881 2.2e-14 83.2 127 41.7
PSO063G4650 Papaver somniferum HOM05D001061 ORTHO05D006881 2.9e-14 82.8 127 41.7
MSTRG.11316 Avicennia marina HOM05D001061 ORTHO05D006881 3.8e-14 82.4 127 43.3
FAN13G0485 Fragaria x ananassa HOM05D002339 ORTHO05D006881 3.8e-14 82.4 126 43.7
Atru.chr9.755 Acer truncatum HOM05D001061 ORTHO05D006881 6.5e-14 81.6 127 41.7
Gohir.D09G046800 Gossypium hirsutum HOM05D001061 ORTHO05D006881 8.5e-14 81.3 127 42.5
Gorai.006G063300 Gossypium raimondii HOM05D001061 ORTHO05D006881 8.5e-14 81.3 127 42.5
Prupe.5G217300 Prunus persica HOM05D001061 ORTHO05D006881 1.1e-13 80.9 127 42.5
MD06G1211200 Malus domestica HOM05D001061 ORTHO05D006881 1.9e-13 80.1 92 53.3
Nitab4.5_0008699g0020 Nicotiana tabacum HOM05D001061 ORTHO05D006881 1.9e-13 80.1 127 39.4
ATR0681G268 Amborella trichopoda HOM05D001061 ORTHO05D006881 5.5e-13 78.6 127 39.4
SGA_v2.0_scaffold19G08803 Striga asiatica HOM05D001061 ORTHO05D006881 7.2e-13 78.2 127 40.9
CDE10G0399 Ceratophyllum demersum HOM05D001061 ORTHO05D006881 9.4e-13 77.8 92 48.9
GSVIVG01008235001 Vitis vinifera HOM05D001061 ORTHO05D006881 9.4e-13 77.8 127 41.7
HPP92_018512 Vanilla planifolia HOM05D001061 ORTHO05D006881 1.2e-12 77.4 125 40.8
AagrBONN_evm.TU.Sc2ySwM_344.1255 Anthoceros agrestis HOM05D001061 ORTHO05D006881 2.1e-12 76.6 125 38.4
Nitab4.5_0001432g0030 Nicotiana tabacum HOM05D001061 ORTHO05D006881 2.1e-12 76.6 127 37.8
RcHm_v2.0_Chr7g0184631 Rosa chinensis HOM05D001061 ORTHO05D006881 2.1e-12 76.6 142 38.7
MD14G1221900 Malus domestica HOM05D001061 ORTHO05D006881 2.7e-12 76.3 92 51.1
CAN.G587.78 Capsicum annuum HOM05D001061 ORTHO05D006881 4.7e-12 75.5 127 38.6
Os05g0274200 Oryza sativa ssp. japonica HOM05D001061 ORTHO05D006881 4.7e-12 75.5 127 38.6
Solyc06g069230.3 Solanum lycopersicum HOM05D001061 ORTHO05D006881 8.0e-12 74.7 127 38.6
Sopen06g026490 Solanum pennellii HOM05D001061 ORTHO05D006881 8.0e-12 74.7 127 38.6
PGSC0003DMG400004071 Solanum tuberosum HOM05D001061 ORTHO05D006881 8.0e-12 74.7 127 38.6
CBR_g24047 Chara braunii HOM05D001061 ORTHO05D006881 1.4e-11 73.9 93 46.2
SMO347G0538 Selaginella moellendorffii HOM05D001061 ORTHO05D006881 3.0e-11 72.8 94 46.8
Mapoly0120s0004 Marchantia polymorpha HOM05D001061 ORTHO05D006881 6.8e-11 71.6 128 35.2
Peaxi162Scf00081g02227 Petunia axillaris HOM05D002283 ORTHO05D008228 1.2e-10 70.9 92 46.7
Pp3c22_850 Physcomitrium patens HOM05D001061 ORTHO05D006881 1.3e-09 67.4 87 46.0
vmacro08693 Vaccinium macrocarpon HOM05D000646 ORTHO05D000607 2.4e-08 63.2 60 53.3
Cpa.g.c35114 Carica papaya HOM05D001061 ORTHO05D006881 9.1e-08 61.2 38 81.6
MCO01G314 Micromonas commoda HOM05D001061 ORTHO05D006881 1.2e-07 60.8 109 35.8
Hund09999 Selenicereus undatus HOM05D001061 ORTHO05D006881 1.6e-07 60.5 35 85.7
QL10p022714 Quercus lobata HOM05D001061 ORTHO05D006881 2.0e-07 60.1 36 86.1
COL.COLO4_22718 Corchorus olitorius HOM05D001061 ORTHO05D006881 3.5e-07 59.3 36 83.3
SHI18889 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-07 59.3 45 73.3
Thecc.03G028100 Theobroma cacao HOM05D001061 ORTHO05D006881 3.5e-07 59.3 36 83.3
unitig_61.g26195 Utricularia gibba HOM05D001061 ORTHO05D006881 5.9e-07 58.5 73 43.8
Peaxi162Scf00013g00939 Petunia axillaris HOM05D001061 ORTHO05D006881 2.3e-06 56.6 36 77.8
PGR083G2045 Punica granatum HOM05D001061 ORTHO05D006881 2.9e-06 56.2 35 80.0
Gohir.D08G213100 Gossypium hirsutum HOM05D000646 ORTHO05D000607 3.8e-06 55.8 61 52.5
PRCOL_00002085 Prasinoderma coloniale HOM05D001061 ORTHO05D006881 5.0e-06 55.5 93 37.6
SMO347G0055 Selaginella moellendorffii HOM05D001061 ORTHO05D006881 6.6e-06 55.1 90 40.0


User provided reference genes

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