Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.7e-274 948.7 497 100.0
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.0e-229 800.0 488 88.5
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 3.0e-218 761.9 478 86.8
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 2.7e-195 685.6 490 75.1
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 4.7e-195 684.9 488 74.4
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 2.9e-189 665.6 490 73.5
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 1.0e-173 614.0 492 71.7
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 6.6e-173 611.3 460 75.2
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 3.7e-168 595.5 490 66.5
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 3.4e-161 572.4 516 63.8
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 9.9e-161 570.9 486 65.8
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 1.2e-158 563.9 515 62.9
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 3.5e-158 562.4 505 62.4
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 4.6e-158 562.0 488 62.1
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 1.3e-157 560.5 484 64.5
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 1.3e-157 560.5 514 61.3
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 1.7e-157 560.1 504 65.1
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 8.6e-157 557.8 514 60.9
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 3.3e-156 555.8 514 62.6
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 3.3e-156 555.8 512 62.9
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 7.3e-156 554.7 519 58.8
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 1.6e-155 553.5 506 60.3
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 2.1e-155 553.1 512 60.0
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 6.2e-155 551.6 511 62.8
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 8.1e-155 551.2 510 59.6
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 1.4e-154 550.4 519 59.3
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 5.2e-154 548.5 532 57.3
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 2.6e-153 546.2 532 57.1
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 4.4e-153 545.4 508 62.4
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 7.6e-153 544.7 511 60.5
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 9.9e-153 544.3 507 60.9
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 1.9e-151 540.0 516 61.8
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 7.1e-151 538.1 503 59.0
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.6e-150 537.0 510 61.0
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 4.6e-150 535.4 513 60.2
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 6.0e-150 535.0 489 61.3
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 3.9e-149 532.3 502 60.6
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 3.9e-149 532.3 483 61.5
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 5.1e-149 531.9 501 60.3
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 6.6e-149 531.6 510 60.8
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.5e-148 530.4 510 60.6
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.5e-148 530.4 510 61.0
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 1.5e-148 530.4 503 59.4
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 4.3e-148 528.9 510 60.8
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 7.3e-148 528.1 495 61.4
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 7.3e-148 528.1 492 60.8
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 1.3e-147 527.3 501 58.9
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 2.1e-147 526.6 505 58.4
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 6.2e-147 525.0 503 58.3
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 8.1e-147 524.6 527 57.3
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.1e-146 524.2 508 59.6
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 1.1e-146 524.2 518 58.5
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 1.1e-146 524.2 488 60.5
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 4.0e-146 522.3 508 58.9
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 4.0e-146 522.3 487 61.0
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 5.3e-146 521.9 512 56.8
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 3.4e-145 519.2 484 59.5
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 9.9e-145 517.7 490 58.6
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 1.7e-144 516.9 488 60.0
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 4.9e-144 515.4 484 60.5
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 1.9e-143 513.5 542 57.9
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.4e-143 513.1 490 59.0
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 7.1e-143 511.5 507 54.8
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 3.5e-142 509.2 521 53.9
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 3.5e-142 509.2 521 53.9
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 6.0e-142 508.4 520 53.1
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 3.0e-141 506.1 507 54.0
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 3.0e-141 506.1 543 55.8
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 5.1e-141 505.4 506 54.2
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 5.1e-141 505.4 510 57.3
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 6.6e-141 505.0 531 55.2
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 6.6e-141 505.0 516 55.4
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 6.6e-141 505.0 484 59.3
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 2.5e-140 503.1 506 57.3
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 3.3e-140 502.7 512 54.1
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 5.6e-140 501.9 505 55.2
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 5.6e-140 501.9 505 55.2
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 7.4e-140 501.5 511 55.2
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 1.3e-139 500.7 519 53.2
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 2.4e-138 496.5 507 54.0
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 1.2e-137 494.2 517 54.7
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 1.5e-137 493.8 507 53.8
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 3.4e-137 492.7 504 57.5
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 9.9e-137 491.1 507 53.8
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 2.9e-136 489.6 512 55.5
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 1.4e-135 487.3 514 53.3
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 2.4e-135 486.5 508 53.7
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 7.9e-134 481.5 492 56.3
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 5.1e-133 478.8 481 60.1
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 1.5e-132 477.2 488 56.1
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 1.4e-127 460.7 447 58.4
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 4.3e-124 449.1 489 53.2
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 2.8e-115 419.9 391 59.8
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 1.3e-112 411.0 451 53.9
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 5.0e-112 409.1 348 63.5
Hma1.2p1_0481F.1_g162010 Hydrangea macrophylla HOM05D003939 ORTHO05D005979 4.2e-111 406.0 330 71.2
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 6.1e-110 402.1 496 49.8
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 2.2e-107 393.7 489 47.4
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 4.1e-106 389.4 495 46.5
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 5.3e-106 389.0 558 47.3
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 3.4e-105 386.3 472 47.7
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 8.5e-104 381.7 488 45.7
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 5.2e-101 372.5 590 42.7
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 2.0e-100 370.5 417 51.1
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 1.7e-96 357.5 491 44.6
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 8.0e-94 348.6 492 44.3
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 3.0e-85 320.1 483 42.4
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 4.4e-84 316.2 495 40.0
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 3.1e-74 283.5 492 36.0
SEGI_32509 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 1.6e-73 281.2 351 46.2
Psat0s5863g0040 Pisum sativum HOM05D003939 ORTHO05D005979 5.9e-73 279.3 273 59.0
CSS0004390 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 4.4e-60 236.5 208 64.4
Psat0s9359g0040 Pisum sativum HOM05D003939 ORTHO05D005979 7.8e-49 199.1 188 58.0
Cpa.g.sc14.167 Carica papaya HOM05D003939 ORTHO05D005979 1.9e-39 167.9 133 66.9
DCAR_026524 Daucus carota HOM05D003939 ORTHO05D005979 9.0e-37 159.1 114 69.3
CiPaw.03G089700 Carya illinoinensis HOM05D003939 ORTHO05D005979 4.0e-29 133.7 170 55.9
MCO01G540 Micromonas commoda HOM05D003939 ORTHO05D005979 5.8e-28 129.8 340 28.2
HPP92_012255 Vanilla planifolia HOM05D003939 ORTHO05D005979 2.2e-27 127.9 311 32.8
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 1.3e-24 118.6 114 54.4
MELO3C001621.2 Cucumis melo HOM05D003939 ORTHO05D005979 1.3e-19 102.1 77 64.9
arahy.Tifrunner.gnm1.ann1.BV8AZF Arachis hypogaea HOM05D001278 ORTHO05D004786 8.2e-14 82.8 56 71.4
arahy.Tifrunner.gnm1.ann1.HI697U Arachis hypogaea HOM05D001278 ORTHO05D005979 8.2e-14 82.8 56 71.4
TPR.G3973 Trifolium pratense HOM05D003939 ORTHO05D005979 1.8e-13 81.6 172 35.5
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 6.9e-13 79.7 115 41.7
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 2.0e-12 78.2 115 40.9
MELO3C001721.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.6e-12 77.8 60 63.3
EL10Ac2g03124 Beta vulgaris HOM05D005544 ORTHO05D007303 5.8e-12 76.6 96 47.9
TAR629G0495 Trochodendron aralioides HOM05D003939 ORTHO05D005979 2.2e-11 74.7 43 79.1
Psat5g164760 Pisum sativum HOM05D003939 ORTHO05D005979 4.2e-10 70.5 48 70.8
Glyma.01G130950 Glycine max HOM05D003939 ORTHO05D005979 4.6e-09 67.0 46 67.4
Cre06.g278269 Chlamydomonas reinhardtii HOM05D003939 ORTHO05D005979 3.7e-06 57.4 451 20.4


User provided reference genes

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