Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004390 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 3.9e-112 408.3 227 100.0
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.9e-87 326.2 254 73.2
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 2.1e-70 269.6 208 69.7
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 6.9e-69 264.6 256 60.9
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 1.7e-67 260.0 253 61.7
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 1.3e-64 250.4 256 58.6
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.5e-60 236.9 208 64.4
Hma1.2p1_0481F.1_g162010 Hydrangea macrophylla HOM05D003939 ORTHO05D005979 3.7e-54 215.7 252 54.8
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 6.7e-48 194.9 209 52.2
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 3.7e-46 189.1 226 53.5
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 4.8e-46 188.7 274 44.2
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 4.8e-46 188.7 244 44.7
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 6.3e-46 188.3 251 51.8
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 2.0e-44 183.3 234 46.6
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 2.0e-44 183.3 271 43.9
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 2.9e-43 179.5 264 43.9
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 2.9e-43 179.5 272 42.6
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 2.5e-42 176.4 245 48.2
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 3.2e-42 176.0 271 43.9
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 3.2e-42 176.0 271 42.1
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 3.2e-42 176.0 271 42.1
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 4.2e-42 175.6 273 43.6
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 1.2e-41 174.1 267 44.2
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 1.2e-41 174.1 273 44.0
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 2.7e-41 172.9 272 45.2
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 2.7e-41 172.9 269 46.5
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 4.7e-41 172.2 272 42.6
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 4.7e-41 172.2 273 42.5
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 1.8e-40 170.2 274 44.9
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 2.3e-40 169.9 269 43.1
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 3.0e-40 169.5 178 53.4
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 3.0e-40 169.5 239 45.2
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 3.0e-40 169.5 271 43.2
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 3.3e-39 166.0 238 46.2
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 3.3e-39 166.0 274 44.2
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 7.5e-39 164.9 274 40.9
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 9.7e-39 164.5 239 44.8
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 1.7e-38 163.7 274 44.5
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 2.2e-38 163.3 213 46.5
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 2.2e-38 163.3 257 40.9
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 3.7e-38 162.5 246 42.3
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 2.4e-37 159.8 215 45.6
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.4e-37 159.8 273 41.4
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 4.1e-37 159.1 253 41.9
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 5.3e-37 158.7 289 38.1
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 5.3e-37 158.7 280 43.6
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 2.0e-36 156.8 280 38.6
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 2.6e-36 156.4 273 40.7
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.6e-36 156.4 273 40.7
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 3.5e-36 156.0 189 49.7
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 5.9e-36 155.2 275 39.6
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 7.7e-36 154.8 273 40.3
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 1.0e-35 154.5 251 39.0
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 1.7e-35 153.7 273 41.4
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 5.0e-35 152.1 253 40.7
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 6.5e-35 151.8 272 39.0
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 6.5e-35 151.8 252 44.0
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 8.5e-35 151.4 195 44.6
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 8.5e-35 151.4 273 39.9
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 1.1e-34 151.0 269 39.0
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 1.1e-34 151.0 269 39.0
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 1.9e-34 150.2 252 42.1
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 1.9e-34 150.2 273 41.8
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 3.2e-34 149.4 213 44.6
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 4.2e-34 149.1 272 39.0
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 5.5e-34 148.7 232 35.8
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 5.5e-34 148.7 230 36.5
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 7.2e-34 148.3 251 39.8
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 9.4e-34 147.9 178 46.1
CiPaw.03G089700 Carya illinoinensis HOM05D003939 ORTHO05D005979 1.2e-33 147.5 146 62.3
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 1.6e-33 147.1 230 36.1
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 2.1e-33 146.7 274 40.1
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 2.7e-33 146.4 232 37.5
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 2.7e-33 146.4 272 37.9
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 2.7e-33 146.4 272 37.9
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 6.1e-33 145.2 247 40.9
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 8.0e-33 144.8 231 39.0
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 2.3e-32 143.3 273 38.1
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 3.0e-32 142.9 270 41.9
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 3.0e-32 142.9 250 40.4
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 6.8e-32 141.7 281 35.9
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 8.8e-32 141.4 280 39.6
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 1.2e-31 141.0 241 40.7
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 1.2e-31 141.0 275 37.5
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 1.5e-31 140.6 229 36.2
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 2.6e-31 139.8 281 35.9
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 3.4e-31 139.4 270 40.4
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 3.4e-31 139.4 268 35.4
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 5.7e-31 138.7 276 38.0
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 7.5e-31 138.3 277 37.5
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 1.7e-30 137.1 240 35.0
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 2.2e-30 136.7 269 36.1
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 4.8e-30 135.6 254 40.6
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 6.3e-30 135.2 233 37.3
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.1e-29 134.4 267 34.5
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 1.2e-28 131.0 228 41.2
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 2.7e-28 129.8 263 37.3
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 1.7e-27 127.1 199 40.2
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 1.1e-26 124.4 345 32.8
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 3.0e-24 116.3 176 39.2
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 1.5e-23 114.0 235 40.9
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 7.5e-23 111.7 200 38.5
HPP92_012255 Vanilla planifolia HOM05D003939 ORTHO05D005979 2.2e-22 110.2 160 41.2
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 3.7e-22 109.4 241 32.8
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 3.7e-22 109.4 199 35.7
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 8.3e-22 108.2 194 37.1
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 3.6e-17 92.8 201 35.8
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 1.2e-15 87.8 194 35.1
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 8.6e-11 71.6 185 25.9
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 5.6e-10 68.9 134 38.8
TPR.G3973 Trifolium pratense HOM05D003939 ORTHO05D005979 1.2e-09 67.8 53 62.3
EL10Ac2g03124 Beta vulgaris HOM05D005544 ORTHO05D007303 6.2e-09 65.5 104 38.5
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 5.2e-08 62.4 68 50.0
Psat0s9359g0040 Pisum sativum HOM05D003939 ORTHO05D005979 4.4e-07 59.3 68 48.5


User provided reference genes

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