Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 3.5e-106 388.7 249 100.0
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 5.6e-88 328.2 251 84.1
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 3.6e-87 325.5 251 83.3
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 4.7e-87 325.1 251 83.3
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 1.4e-83 313.5 251 80.1
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 1.4e-75 287.0 249 75.1
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 8.7e-73 277.7 252 72.2
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 1.4e-70 270.4 259 71.8
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 7.6e-69 264.6 251 69.3
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 2.2e-68 263.1 249 69.1
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 2.9e-68 262.7 250 71.2
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 4.2e-67 258.8 250 70.0
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 4.2e-67 258.8 251 68.1
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 4.6e-66 255.4 252 71.0
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.3e-65 253.8 252 65.5
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.3e-65 253.8 252 65.9
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 1.3e-65 253.8 257 65.4
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 2.3e-65 253.1 252 65.9
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.0e-65 252.7 252 65.1
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 1.9e-64 250.0 252 67.1
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 4.3e-64 248.8 249 66.3
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 5.6e-64 248.4 255 60.8
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 5.6e-64 248.4 248 71.4
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 9.6e-64 247.7 247 68.0
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 2.1e-63 246.5 248 64.5
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 4.8e-63 245.4 255 63.9
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 4.8e-63 245.4 252 62.3
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 8.1e-63 244.6 250 68.8
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 5.3e-62 241.9 247 65.6
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 5.3e-62 241.9 247 65.6
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 9.0e-62 241.1 252 64.7
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 1.5e-61 240.4 259 59.8
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.0e-61 240.0 262 63.0
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.6e-61 239.6 254 66.9
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 4.5e-61 238.8 252 63.5
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 7.6e-61 238.0 247 64.8
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 1.3e-60 237.3 261 62.1
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.7e-60 236.9 254 68.5
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 2.9e-60 236.1 247 59.9
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 1.1e-59 234.2 249 64.7
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.1e-59 234.2 259 62.5
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 4.2e-59 232.3 247 67.6
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 4.2e-59 232.3 261 65.9
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.8e-57 226.9 293 51.9
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 3.0e-57 226.1 248 62.9
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 3.9e-57 225.7 248 62.9
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 5.1e-57 225.3 242 59.1
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 8.7e-57 224.6 289 52.2
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 3.3e-56 222.6 260 59.2
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 4.3e-56 222.2 261 56.3
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 5.6e-56 221.9 246 64.2
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 7.4e-56 221.5 259 61.8
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.3e-55 220.7 247 68.0
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 2.8e-55 219.5 249 64.3
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 4.8e-55 218.8 288 50.3
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 1.1e-54 217.6 252 58.3
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 1.8e-54 216.9 261 57.5
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 2.4e-54 216.5 272 59.6
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 2.4e-54 216.5 260 54.6
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 4.0e-54 215.7 249 62.7
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 6.9e-54 214.9 263 56.3
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 6.9e-54 214.9 263 56.3
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 9.0e-54 214.5 250 58.4
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 9.0e-54 214.5 260 54.2
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.5e-53 213.8 261 58.6
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 4.5e-53 212.2 252 56.7
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 5.8e-53 211.8 262 59.2
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.9e-52 209.5 261 60.5
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 3.8e-52 209.1 249 61.0
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 8.4e-52 208.0 263 57.0
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.1e-51 207.6 261 59.0
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 1.4e-51 207.2 252 61.5
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 1.9e-51 206.8 294 54.8
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 4.2e-51 205.7 261 58.2
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 5.5e-51 205.3 248 62.1
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 1.6e-50 203.8 252 58.3
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 4.6e-50 202.2 249 64.7
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 6.0e-50 201.8 251 59.0
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 6.0e-50 201.8 254 57.9
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 1.8e-49 200.3 267 56.6
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 6.2e-47 191.8 245 51.8
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 8.2e-47 191.4 253 54.2
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 1.1e-46 191.0 267 56.9
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 1.1e-46 191.0 250 54.0
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.1e-46 191.0 267 55.4
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 1.4e-46 190.7 245 54.3
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.2e-45 187.6 251 53.8
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 2.9e-44 183.0 250 53.2
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 6.5e-44 181.8 250 55.2
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 3.5e-42 176.0 253 49.4
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 2.6e-37 159.8 255 45.9
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.7e-36 157.1 297 45.5
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 1.4e-35 154.1 206 61.2
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 5.5e-35 152.1 237 43.9
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 5.5e-35 152.1 247 49.8
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 3.9e-33 146.0 295 47.8
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 5.7e-32 142.1 99 77.8
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.8e-30 137.1 121 66.1
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 1.2e-29 134.4 92 71.7
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 4.2e-27 125.9 207 51.7
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 9.4e-27 124.8 287 40.4
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 5.7e-24 115.5 70 81.4
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 7.4e-24 115.2 212 49.5
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 1.7e-23 114.0 70 77.1
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 2.0e-21 107.1 334 34.1
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 2.0e-21 107.1 282 37.9
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 5.9e-21 105.5 121 57.9
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 4.7e-18 95.9 245 38.0
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.3e-16 89.7 184 45.1
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 7.4e-16 88.6 200 47.0
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.3e-15 87.8 187 43.9
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 6.3e-15 85.5 122 48.4
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.2e-11 72.8 78 62.8
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.2e-11 72.8 78 62.8
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 4.2e-11 72.8 119 47.9
Ah.08g219340 Amaranthus hybridus HOM05D006779 ORTHO05D008491 4.4e-08 62.8 95 50.5
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 1.7e-07 60.8 57 63.2
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.8e-07 60.1 89 51.7


User provided reference genes

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