Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 7.9e-258 893.3 452 100.0
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 2.8e-154 549.3 443 64.6
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 4.2e-150 535.4 429 64.1
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 3.0e-140 502.7 449 58.8
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 1.9e-139 500.0 424 61.1
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 2.5e-139 499.6 449 58.6
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 3.3e-139 499.2 426 62.4
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 4.3e-139 498.8 401 62.8
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 1.3e-138 497.3 411 63.0
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 4.8e-138 495.4 449 59.0
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 1.8e-137 493.4 427 61.4
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 5.3e-137 491.9 419 59.4
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 1.2e-136 490.7 411 61.8
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 1.5e-136 490.3 435 59.5
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 2.0e-136 490.0 441 58.7
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 4.5e-136 488.8 460 58.9
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 5.9e-136 488.4 460 59.3
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 1.0e-135 487.6 438 60.3
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 1.0e-135 487.6 442 58.6
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 1.3e-135 487.3 408 61.8
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 3.8e-135 485.7 432 60.2
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 3.8e-135 485.7 400 62.8
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 5.0e-135 485.3 408 61.5
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 1.4e-134 483.8 434 59.4
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 2.5e-134 483.0 422 60.4
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 2.5e-134 483.0 460 59.6
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 7.2e-134 481.5 442 58.4
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 7.2e-134 481.5 442 58.4
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 1.2e-133 480.7 433 59.4
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 2.1e-133 479.9 408 61.5
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 2.7e-133 479.6 430 58.6
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 2.7e-133 479.6 415 61.4
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 3.6e-133 479.2 463 55.7
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 4.6e-133 478.8 446 59.9
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 1.0e-132 477.6 439 57.9
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 1.4e-132 477.2 455 57.6
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 1.8e-132 476.9 423 60.0
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 3.0e-132 476.1 442 57.5
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 3.9e-132 475.7 434 59.2
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 3.9e-132 475.7 434 59.2
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 6.7e-132 474.9 404 62.4
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 6.7e-132 474.9 440 58.4
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 1.1e-131 474.2 413 60.0
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 1.5e-131 473.8 411 59.9
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 2.5e-131 473.0 405 60.5
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 4.3e-131 472.2 417 59.5
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 5.7e-131 471.9 450 56.7
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 7.4e-131 471.5 426 59.2
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 9.7e-131 471.1 445 56.0
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 2.8e-130 469.5 451 57.4
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 2.8e-130 469.5 438 57.3
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 6.3e-130 468.4 428 58.6
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 6.3e-130 468.4 474 56.1
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 6.3e-130 468.4 402 59.7
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 1.4e-129 467.2 441 57.4
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 1.8e-129 466.8 440 57.0
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 4.1e-129 465.7 449 55.7
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 4.1e-129 465.7 419 58.5
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 5.3e-129 465.3 414 58.2
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 5.3e-129 465.3 433 57.7
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 9.1e-129 464.5 432 58.3
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 1.2e-128 464.2 432 56.9
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 3.4e-128 462.6 415 59.0
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 4.5e-128 462.2 425 57.4
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 4.5e-128 462.2 406 61.8
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 5.9e-128 461.8 440 56.4
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 1.0e-127 461.1 380 62.6
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 1.3e-127 460.7 422 56.4
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 1.3e-127 460.7 412 58.5
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 8.5e-127 458.0 385 61.3
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 1.1e-126 457.6 458 54.8
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 1.4e-126 457.2 417 58.3
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 2.5e-126 456.4 418 57.9
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 5.5e-126 455.3 429 56.9
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 2.1e-125 453.4 439 56.0
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 2.7e-125 453.0 404 58.4
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 3.6e-125 452.6 425 57.6
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 6.1e-125 451.8 436 55.3
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 7.9e-125 451.4 441 55.8
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 1.1e-123 447.6 445 53.5
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 2.2e-122 443.4 437 55.1
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 4.8e-122 442.2 399 60.9
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 4.8e-122 442.2 526 49.4
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 1.5e-120 437.2 431 55.7
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 1.0e-119 434.5 447 53.2
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.0e-119 434.5 401 59.4
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 1.3e-119 434.1 394 59.9
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.9e-119 433.0 447 53.0
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 5.0e-119 432.2 378 59.8
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.6e-117 427.2 398 57.8
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 4.7e-117 425.6 436 54.4
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.3e-116 423.3 447 52.1
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 5.9e-112 408.7 437 51.3
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 5.5e-110 402.1 368 59.5
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 1.4e-108 397.5 418 54.3
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 2.2e-106 390.2 494 47.2
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 2.0e-104 383.6 419 51.8
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 4.2e-102 375.9 303 63.7
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 7.2e-102 375.2 420 52.6
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 5.9e-96 355.5 570 40.5
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 1.3e-95 354.4 485 43.9
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 1.9e-94 350.5 420 49.0
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 1.4e-92 344.4 321 57.9
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 4.1e-89 332.8 296 59.8
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 6.6e-79 298.9 291 55.3
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 2.3e-71 273.9 402 42.5
FAN11G0847 Fragaria x ananassa HOM05D006570 ORTHO05D008193 7.1e-65 252.3 228 57.0
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 3.0e-63 246.9 504 37.7
QL01p050877 Quercus lobata HOM05D006570 ORTHO05D008193 1.1e-60 238.4 246 50.8
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 1.5e-59 234.6 136 84.6
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 6.6e-55 219.2 283 46.6
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 6.6e-47 192.6 126 76.2
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 6.6e-47 192.6 126 76.2
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 4.9e-42 176.4 282 37.2
GSVIVG01038286001 Vitis vinifera HOM05D006570 ORTHO05D008193 3.9e-39 166.8 189 45.5
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 1.0e-34 152.1 126 61.9
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 5.5e-33 146.4 112 64.3
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-23 112.8 74 70.3
Glyma.16G028601 Glycine max HOM05D006570 ORTHO05D008193 1.6e-21 108.2 96 53.1
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 4.5e-19 100.1 129 47.3
QL05p014267 Quercus lobata HOM05D006570 ORTHO05D008193 1.3e-18 98.6 191 36.1
QL05p014599 Quercus lobata HOM05D006570 ORTHO05D008193 3.0e-15 87.4 127 41.7
CBR_g38518 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-12 76.6 147 35.4


User provided reference genes

Program Settings