Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1197 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 3.4e-132 474.9 229 100.0
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 7.4e-95 350.9 238 70.6
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 1.6e-94 349.7 238 69.3
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 4.8e-94 348.2 238 70.6
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 1.1e-93 347.1 238 67.6
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 3.1e-93 345.5 238 71.0
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 3.1e-93 345.5 238 70.2
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 5.3e-93 344.7 238 68.9
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 5.3e-93 344.7 238 69.3
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 1.2e-92 343.6 238 68.1
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 1.5e-92 343.2 238 69.7
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 2.0e-92 342.8 238 68.9
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 2.6e-92 342.4 238 68.1
vmacro08562 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 3.4e-92 342.0 240 68.3
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 4.5e-92 341.7 238 68.1
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 5.9e-92 341.3 238 67.6
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 5.9e-92 341.3 238 68.9
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 7.7e-92 340.9 238 67.6
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 7.7e-92 340.9 238 67.6
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 1.7e-91 339.7 238 68.1
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 3.8e-91 338.6 238 67.6
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.8e-91 338.6 238 67.6
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 5.0e-91 338.2 238 68.1
Lj6A637T63 Lonicera japonica HOM05D004511 ORTHO05D005348 6.5e-91 337.8 246 66.3
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 8.5e-91 337.4 238 67.6
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 1.1e-90 337.0 238 68.9
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 1.1e-90 337.0 238 67.6
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 1.1e-90 337.0 238 67.6
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 2.5e-90 335.9 238 67.6
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 3.2e-90 335.5 238 68.5
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 3.2e-90 335.5 238 68.5
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 3.2e-90 335.5 238 68.1
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 4.2e-90 335.1 238 67.2
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 4.2e-90 335.1 238 67.2
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 4.2e-90 335.1 238 67.2
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 4.2e-90 335.1 238 67.2
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 5.5e-90 334.7 238 67.2
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 7.2e-90 334.3 238 67.2
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 9.4e-90 334.0 238 67.2
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 9.4e-90 334.0 238 67.2
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 1.2e-89 333.6 238 66.4
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 1.2e-89 333.6 238 66.4
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 1.2e-89 333.6 238 67.6
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 1.2e-89 333.6 238 67.2
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 1.6e-89 333.2 238 68.1
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 2.1e-89 332.8 238 66.8
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 2.1e-89 332.8 238 66.4
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 2.1e-89 332.8 225 70.7
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 2.7e-89 332.4 225 69.8
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 3.6e-89 332.0 225 69.3
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 3.6e-89 332.0 226 69.9
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 3.6e-89 332.0 238 67.2
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 4.6e-89 331.6 238 66.0
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 4.6e-89 331.6 238 67.2
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 6.1e-89 331.3 238 67.2
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 6.1e-89 331.3 238 66.0
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 6.1e-89 331.3 225 70.7
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 6.1e-89 331.3 233 67.8
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 1.4e-88 330.1 238 66.8
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 1.8e-88 329.7 238 67.2
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 2.3e-88 329.3 238 66.8
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 2.3e-88 329.3 238 66.8
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 3.9e-88 328.6 238 65.5
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 5.1e-88 328.2 225 69.3
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 6.7e-88 327.8 238 65.5
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 8.8e-88 327.4 238 65.5
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 1.5e-87 326.6 238 66.0
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 3.3e-87 325.5 238 66.4
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 4.3e-87 325.1 238 67.2
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 5.7e-87 324.7 225 68.0
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 5.7e-87 324.7 238 64.7
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 9.7e-87 323.9 225 68.4
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 1.7e-86 323.2 238 66.0
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 3.7e-86 322.0 238 65.1
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 1.4e-85 320.1 238 65.1
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 2.4e-85 319.3 225 67.6
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 1.2e-84 317.0 238 63.4
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 1.5e-84 316.6 238 65.5
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 7.7e-84 314.3 236 65.7
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 1.7e-83 313.2 238 62.6
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 1.7e-83 313.2 238 63.4
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 6.5e-83 311.2 238 63.4
CSS0022858 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 9.4e-82 307.4 210 69.0
CSS0015875 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 6.1e-81 304.7 224 65.2
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 7.9e-81 304.3 238 63.9
CAN.G524.10 Capsicum annuum HOM05D004511 ORTHO05D005348 4.1e-77 292.0 216 65.7
Hund00489 Selenicereus undatus HOM05D004511 ORTHO05D005348 2.0e-76 289.7 234 59.4
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.5e-76 288.9 219 64.8
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 2.5e-74 282.7 315 49.5
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 3.2e-74 282.3 238 58.4
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 1.0e-72 277.3 204 64.2
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 2.8e-70 269.2 222 57.7
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 3.1e-69 265.8 236 55.5
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 7.7e-68 261.2 219 58.0
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.1e-66 257.3 190 64.7
Manes.03G157900 Manihot esculenta HOM05D004511 ORTHO05D005348 8.0e-65 251.1 192 65.1
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 8.8e-64 247.7 222 54.1
SHI00812 Sapria himalayana HOM05D004511 ORTHO05D005348 7.5e-63 244.6 232 53.4
Hund00476 Selenicereus undatus HOM05D004511 ORTHO05D005348 3.7e-62 242.3 192 61.5
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 4.5e-60 235.3 166 65.1
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 6.5e-59 231.5 223 49.8
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.7e-54 216.9 203 54.2
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.4e-48 197.2 184 54.3
CBR_g22304 Chara braunii HOM05D000019 ORTHO05D000002 5.2e-48 195.3 206 47.6
VMungo0720G0419 Vigna mungo HOM05D004511 ORTHO05D005348 2.4e-45 186.4 162 54.9
Sopen09g033860 Solanum pennellii HOM05D004511 ORTHO05D005348 4.3e-26 122.5 88 68.2
Solyc09g090890.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 2.0e-23 113.6 66 78.8
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 7.6e-23 111.7 208 35.6
Atru.chr4.2015 Acer truncatum HOM05D004511 ORTHO05D005348 6.0e-20 102.1 197 33.5
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 1.5e-15 87.4 239 30.5
Ca_21499_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 2.9e-06 56.6 86 39.5


User provided reference genes

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