Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 3.4e-220 768.1 397 100.0
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 1.2e-87 327.8 395 48.1
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 3.5e-84 316.2 288 57.6
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 1.6e-81 307.4 345 51.3
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 2.6e-79 300.1 308 54.2
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 1.3e-78 297.7 308 53.6
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 3.7e-78 296.2 349 49.0
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 4.1e-77 292.7 293 52.9
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 2.1e-76 290.4 298 52.7
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 2.7e-76 290.0 297 52.2
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 3.5e-76 289.7 305 52.1
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 4.6e-76 289.3 274 54.4
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 4.6e-76 289.3 351 48.1
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 4.6e-76 289.3 298 52.0
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 4.6e-76 289.3 293 52.9
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 6.0e-76 288.9 295 52.9
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 6.0e-76 288.9 297 51.5
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 7.8e-76 288.5 351 49.0
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 1.0e-75 288.1 326 49.4
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 2.3e-75 287.0 336 49.4
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 2.3e-75 287.0 348 48.6
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 3.0e-75 286.6 295 52.2
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 1.5e-74 284.3 345 47.8
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.5e-74 284.3 345 47.8
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 2.5e-74 283.5 298 50.3
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 5.6e-74 282.3 350 47.4
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 7.3e-74 282.0 336 49.1
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 7.3e-74 282.0 339 47.2
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 9.6e-74 281.6 347 47.6
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 9.6e-74 281.6 341 47.5
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 1.2e-73 281.2 341 48.4
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 2.1e-73 280.4 309 48.9
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 2.8e-73 280.0 326 48.2
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 4.7e-73 279.3 271 55.7
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 8.1e-73 278.5 271 51.7
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 8.1e-73 278.5 271 52.4
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 1.1e-72 278.1 309 49.5
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 3.1e-72 276.6 309 49.5
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 5.2e-72 275.8 270 51.1
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 6.8e-72 275.4 309 49.2
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 8.9e-72 275.0 322 47.2
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 1.2e-71 274.6 338 46.4
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 1.5e-71 274.2 343 47.5
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 1.5e-71 274.2 296 51.4
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 2.0e-71 273.9 293 48.8
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 2.6e-71 273.5 351 44.7
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 2.6e-71 273.5 287 50.2
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 3.4e-71 273.1 309 48.2
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 3.4e-71 273.1 309 48.2
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 4.4e-71 272.7 278 49.3
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 4.4e-71 272.7 293 48.8
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 4.4e-71 272.7 391 41.7
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 5.8e-71 272.3 343 46.6
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 9.9e-71 271.6 350 45.4
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 9.9e-71 271.6 342 45.6
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 1.7e-70 270.8 335 45.1
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 2.2e-70 270.4 334 46.4
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 2.2e-70 270.4 325 46.2
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 2.9e-70 270.0 316 46.5
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 2.9e-70 270.0 288 50.0
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 2.9e-70 270.0 284 51.8
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 2.9e-70 270.0 340 44.1
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 2.9e-70 270.0 281 51.2
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 4.9e-70 269.2 321 45.2
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 6.4e-70 268.9 363 45.5
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 6.4e-70 268.9 317 47.9
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 6.4e-70 268.9 322 48.1
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 8.4e-70 268.5 327 48.9
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 1.4e-69 267.7 282 51.1
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 2.4e-69 266.9 323 46.4
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 2.4e-69 266.9 309 49.5
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 3.2e-69 266.5 324 46.3
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 3.2e-69 266.5 396 43.2
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 7.1e-69 265.4 299 49.8
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 9.3e-69 265.0 284 51.1
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 1.6e-68 264.2 446 40.4
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 1.6e-68 264.2 393 41.2
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 6.0e-68 262.3 342 44.2
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 7.8e-68 261.9 293 50.9
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 7.8e-68 261.9 340 46.2
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 3.0e-67 260.0 288 47.9
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 1.5e-66 257.7 307 47.2
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 2.5e-66 256.9 320 45.3
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 2.5e-66 256.9 341 44.0
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 1.4e-64 251.1 321 45.5
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 3.4e-63 246.5 267 49.1
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 5.8e-63 245.7 271 50.6
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 8.4e-62 241.9 276 45.3
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 1.3e-57 228.0 239 51.9
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 2.1e-57 227.3 241 52.3
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 4.3e-50 203.0 320 39.1
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 3.7e-49 199.9 207 51.2
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 1.3e-46 191.4 274 39.4
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 1.6e-44 184.5 270 38.9
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 2.5e-37 160.6 289 34.9
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 3.3e-34 150.2 175 49.1
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 2.8e-33 147.1 160 53.1
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 2.7e-28 130.6 103 52.4
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 2.4e-24 117.5 145 44.8
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 2.6e-23 114.0 144 43.8
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 3.7e-17 93.6 208 30.3
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 8.2e-17 92.4 228 29.4
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 7.2e-13 79.3 72 52.8


User provided reference genes

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