Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 3.5e-98 361.7 194 100.0
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.7e-58 229.2 194 72.2
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 2.8e-55 219.2 261 53.3
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 1.0e-52 210.7 276 50.0
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.9e-51 206.5 262 48.5
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 9.5e-51 204.1 250 52.4
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.8e-50 202.6 248 52.4
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 2.8e-50 202.6 248 52.4
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.8e-50 202.6 254 49.6
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 3.6e-50 202.2 248 52.4
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 3.6e-50 202.2 256 49.6
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 8.0e-50 201.1 249 51.0
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 1.4e-49 200.3 252 50.0
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 1.8e-49 199.9 248 53.2
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 5.2e-49 198.4 249 52.6
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 8.9e-49 197.6 254 50.0
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.0e-48 196.4 257 48.6
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 2.6e-48 196.1 250 49.6
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 2.6e-48 196.1 249 50.6
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 3.4e-48 195.7 249 50.6
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 5.7e-48 194.9 245 51.8
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 5.7e-48 194.9 252 48.4
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 5.7e-48 194.9 232 53.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 1.3e-47 193.7 248 51.6
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 4.9e-47 191.8 195 61.0
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 4.9e-47 191.8 251 49.4
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 8.3e-47 191.0 258 49.2
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.4e-46 190.3 243 51.4
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.4e-46 190.3 243 51.4
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 2.4e-46 189.5 251 49.4
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 2.4e-46 189.5 249 50.2
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 7.0e-46 188.0 254 49.2
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.2e-45 187.2 244 49.2
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 2.0e-45 186.4 245 51.4
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 2.0e-45 186.4 253 47.8
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 3.5e-45 185.7 257 47.9
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.5e-45 185.7 253 48.2
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 4.6e-45 185.3 253 48.6
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 5.9e-45 184.9 260 45.8
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 5.9e-45 184.9 263 47.1
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 5.9e-45 184.9 251 49.8
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 7.8e-45 184.5 245 51.4
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 7.8e-45 184.5 254 47.2
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.0e-44 184.1 216 52.8
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 1.3e-44 183.7 244 48.4
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 1.7e-44 183.3 245 50.6
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.7e-44 183.3 254 46.9
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 2.3e-44 183.0 250 48.8
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 3.0e-44 182.6 253 47.0
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 3.9e-44 182.2 252 48.8
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.9e-44 182.2 253 47.0
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 3.9e-44 182.2 243 49.8
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 3.9e-44 182.2 250 48.8
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 6.6e-44 181.4 250 48.4
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 6.6e-44 181.4 238 49.6
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 6.6e-44 181.4 253 49.4
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 8.6e-44 181.0 253 46.6
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.9e-43 179.9 251 47.8
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 2.5e-43 179.5 256 46.1
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 3.3e-43 179.1 243 50.2
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 3.1e-41 172.6 245 47.3
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 4.0e-41 172.2 246 45.9
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 5.2e-41 171.8 238 47.9
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 5.2e-41 171.8 261 43.7
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 5.2e-41 171.8 261 44.4
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 8.9e-41 171.0 261 44.4
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 1.2e-40 170.6 241 48.1
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.5e-40 170.2 261 43.3
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 1.5e-40 170.2 261 44.4
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 2.0e-40 169.9 293 41.6
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 3.4e-40 169.1 249 44.6
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 3.4e-40 169.1 242 47.1
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 3.4e-40 169.1 240 48.3
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 3.4e-40 169.1 259 45.9
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 3.4e-40 169.1 246 47.2
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 4.4e-40 168.7 289 40.1
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 5.8e-40 168.3 245 47.8
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 1.7e-39 166.8 241 48.1
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 6.4e-39 164.9 240 47.1
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.1e-38 164.1 248 46.8
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 1.9e-38 163.3 254 43.7
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 4.6e-37 158.7 259 44.8
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 7.8e-37 157.9 294 40.1
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.0e-36 157.5 281 41.3
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 1.0e-36 157.5 248 44.0
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.5e-35 152.9 113 71.7
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 4.3e-35 152.1 238 43.7
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 1.2e-34 150.6 241 44.8
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.2e-34 150.6 246 43.1
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 1.6e-34 150.2 226 46.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 2.8e-34 149.4 238 44.5
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 1.2e-32 144.1 238 43.7
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.5e-32 143.7 239 43.9
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 7.5e-32 141.4 93 73.1
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 3.2e-30 136.0 236 40.7
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 2.1e-29 133.3 301 35.9
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 1.7e-28 130.2 250 38.4
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 3.0e-28 129.4 98 63.3
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 6.6e-28 128.3 70 85.7
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 3.4e-24 115.9 70 78.6
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 1.4e-22 110.5 295 33.2
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 1.9e-22 110.2 206 42.2
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 3.5e-21 105.9 205 41.5
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 5.1e-20 102.1 265 32.8
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 5.6e-19 98.6 113 45.1
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 7.1e-14 81.6 195 40.5
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.1e-13 80.1 82 56.1
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 6.0e-13 78.6 156 39.1
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 1.3e-12 77.4 96 53.1
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 3.9e-12 75.9 69 65.2
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 6.6e-12 75.1 156 37.2
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.5e-08 63.9 160 40.6
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 4.9e-07 58.9 97 48.5
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 6.4e-07 58.5 50 64.0


User provided reference genes

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