Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3219 Ceratophyllum demersum HOM05D006136 ORTHO05D007244 3.0e-246 854.7 431 100.0
MBI16_g40727_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 1.3e-47 194.9 506 32.8
TAR626G0660 Trochodendron aralioides HOM05D006136 ORTHO05D007244 9.1e-46 188.7 324 40.4
Aqoxy7G02564 Aquilegia oxysepala HOM05D006136 ORTHO05D007244 5.0e-44 183.0 370 38.4
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 6.6e-44 182.6 339 38.3
Oeu000955.1 Olea europaea HOM05D006136 ORTHO05D007244 1.5e-43 181.4 539 31.9
Zm00001eb209220 Zea mays HOM05D006136 ORTHO05D007244 1.9e-43 181.0 495 31.5
CSS0019621 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 3.3e-43 180.3 320 37.2
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 3.3e-43 180.3 324 36.7
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 4.2e-43 179.9 322 37.0
PSO478G4925 Papaver somniferum HOM05D006136 ORTHO05D007244 5.5e-43 179.5 429 33.1
Cc06_g23510 Coffea canephora HOM05D006136 ORTHO05D007244 4.7e-42 176.4 262 40.5
Eucgr.C02149 Eucalyptus grandis HOM05D006136 ORTHO05D007244 8.0e-42 175.6 355 37.7
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 1.4e-41 174.9 336 37.5
MSTRG.26507 Avicennia marina HOM05D006136 ORTHO05D007244 1.8e-41 174.5 327 35.5
Lj9A583T57 Lonicera japonica HOM05D006136 ORTHO05D007244 3.0e-41 173.7 393 35.1
Os02g0138200 Oryza sativa ssp. japonica HOM05D006136 ORTHO05D007244 5.2e-41 172.9 493 29.4
DCAR_020445 Daucus carota HOM05D006136 ORTHO05D002774 1.2e-40 171.8 324 38.0
PSO782G1690 Papaver somniferum HOM05D006136 ORTHO05D007244 1.2e-40 171.8 331 36.0
Nn5g26953 Nelumbo nucifera HOM05D006136 ORTHO05D007244 1.5e-40 171.4 357 35.9
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 1.5e-40 171.4 440 33.9
Potri.018G151300 Populus trichocarpa HOM05D006136 ORTHO05D007244 2.0e-40 171.0 508 29.1
Sc06g0001020 Simmondsia chinensis HOM05D006136 ORTHO05D007244 5.7e-40 169.5 393 34.6
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 5.7e-40 169.5 329 35.6
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 7.5e-40 169.1 325 36.3
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 9.8e-40 168.7 325 35.7
EL10Ac2g03821 Beta vulgaris HOM05D006136 ORTHO05D007244 1.3e-39 168.3 216 42.1
unitig_699.g19255 Utricularia gibba HOM05D006136 ORTHO05D007244 3.7e-39 166.8 367 35.4
Ca_02520_v3 Cicer arietinum L. HOM05D006136 ORTHO05D007244 6.3e-39 166.0 468 28.2
Lsat_1_v5_gn_5_82020 Lactuca sativa HOM05D006136 ORTHO05D007244 8.3e-39 165.6 338 33.1
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 4.1e-38 163.3 363 34.4
TWI32G0914 Tripterygium wilfordii HOM05D006136 ORTHO05D007244 4.1e-38 163.3 260 41.5
SalBow5G5580 Salvia bowleyana HOM05D006136 ORTHO05D007244 1.2e-37 161.8 342 34.8
HanXRQChr10g0309281 Helianthus annuus HOM05D006136 ORTHO05D007244 2.0e-37 161.0 287 35.2
HPP92_017041 Vanilla planifolia HOM05D006136 ORTHO05D007244 2.0e-37 161.0 480 30.8
Sabra18G0127000 Salix brachista HOM05D006136 ORTHO05D007244 3.5e-37 160.2 508 27.0
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 7.8e-37 159.1 232 40.9
QL05p072260 Quercus lobata HOM05D000321 ORTHO05D007244 7.8e-37 159.1 440 32.5
ATR0626G098 Amborella trichopoda HOM05D006136 ORTHO05D007244 1.7e-36 157.9 199 46.7
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 1.7e-36 157.9 232 40.9
Sopen07g022390 Solanum pennellii HOM05D006136 ORTHO05D007244 2.3e-36 157.5 224 38.8
Cpa.g.sc46.113 Carica papaya HOM05D006136 ORTHO05D007244 5.0e-36 156.4 332 35.5
Nitab4.5_0000807g0150 Nicotiana tabacum HOM05D006136 ORTHO05D007244 5.0e-36 156.4 217 40.1
TPR.G18712 Trifolium pratense HOM05D006136 ORTHO05D007244 5.0e-36 156.4 338 34.9
MD04G1000700 Malus domestica HOM05D006136 ORTHO05D007244 8.6e-36 155.6 332 34.0
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 1.1e-35 155.2 316 34.5
PGR044G0474 Punica granatum HOM05D006136 ORTHO05D007244 2.5e-35 154.1 327 35.5
Actinidia33603 Actinidia chinensis HOM05D006136 ORTHO05D007244 3.3e-35 153.7 240 38.8
Migut.L01610 Erythranthe guttata HOM05D006136 ORTHO05D007244 3.3e-35 153.7 335 33.7
Haze_21244 Corylus avellana HOM05D006136 ORTHO05D007244 5.6e-35 152.9 376 32.7
ECA234G2139 Erigeron canadensis HOM05D006136 ORTHO05D007244 9.5e-35 152.1 319 33.5
GSVIVG01038333001 Vitis vinifera HOM05D006136 ORTHO05D007244 9.5e-35 152.1 161 50.3
PGSC0003DMG400013541 Solanum tuberosum HOM05D006136 ORTHO05D007244 1.2e-34 151.8 223 38.6
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 1.6e-34 151.4 585 28.2
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 2.8e-34 150.6 336 33.6
Ciclev10007497m.g Citrus clementina HOM05D006136 ORTHO05D007244 4.7e-34 149.8 452 31.4
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 6.2e-34 149.4 205 45.9
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 2.3e-33 147.5 253 35.6
MELO3C010014.2 Cucumis melo HOM05D006136 ORTHO05D007244 5.2e-33 146.4 193 40.9
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 1.2e-32 145.2 368 32.1
RcHm_v2.0_Chr4g0384741 Rosa chinensis HOM05D006136 ORTHO05D007244 1.2e-32 145.2 317 34.4
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 2.0e-32 144.4 327 33.3
Peaxi162Scf00474g00018 Petunia axillaris HOM05D006136 ORTHO05D007244 4.4e-32 143.3 199 40.7
COL.COLO4_09001 Corchorus olitorius HOM05D006136 ORTHO05D007244 5.8e-32 142.9 162 48.8
Solyc07g042740.3 Solanum lycopersicum HOM05D006136 ORTHO05D007244 5.8e-32 142.9 220 37.7
FAN12G0507 Fragaria x ananassa HOM05D006136 ORTHO05D007244 9.8e-32 142.1 147 47.6
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 9.8e-32 142.1 264 33.0
Prupe.1G000700 Prunus persica HOM05D006136 ORTHO05D007244 9.8e-32 142.1 325 34.5
AUR62009114 Chenopodium quinoa HOM05D000163 ORTHO05D007244 1.7e-31 141.4 184 42.9
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 2.9e-31 140.6 264 33.0
CARHR271930 Cardamine hirsuta HOM05D006136 ORTHO05D007244 6.4e-31 139.4 317 33.8
FAN12G3399 Fragaria x ananassa HOM05D006136 ORTHO05D007244 6.4e-31 139.4 329 32.8
FAN17G2087 Fragaria x ananassa HOM05D006136 ORTHO05D007244 5.4e-30 136.3 408 28.4
BraA10t43623Z Brassica rapa HOM05D006136 ORTHO05D007244 7.0e-30 136.0 154 48.7
CsaV3_1G044190 Cucumis sativus L. HOM05D006136 ORTHO05D007244 9.2e-30 135.6 402 29.9
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 9.2e-30 135.6 326 32.8
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 9.2e-30 135.6 150 46.7
A10p16060 Brassica napus HOM05D006136 ORTHO05D007244 1.6e-29 134.8 155 46.5
Aa31LG3G13960 Aethionema arabicum HOM05D006136 ORTHO05D007244 3.5e-29 133.7 349 30.7
THA.LOC104803376 Tarenaya hassleriana HOM05D006136 ORTHO05D007244 3.5e-29 133.7 299 36.8
ClCG03G011600 Citrullus lanatus HOM05D006136 ORTHO05D007244 4.6e-29 133.3 438 29.2
Duzib170G0744 Durio zibethinus HOM05D006136 ORTHO05D007244 4.6e-29 133.3 280 33.6
CANSAT01G2594 Cannabis sativa HOM05D006136 ORTHO05D007244 6.0e-29 132.9 159 42.1
BcaB08g36165 Brassica carinata HOM05D006136 ORTHO05D007244 7.8e-29 132.5 155 46.5
BcaC04g19905 Brassica carinata HOM05D006136 ORTHO05D007244 7.8e-29 132.5 154 46.1
Medtr2g048340 Medicago truncatula HOM05D006136 ORTHO05D007244 7.8e-29 132.5 328 33.2
Carub.0008s1868 Capsella rubella HOM05D006136 ORTHO05D007244 1.7e-28 131.3 317 32.8
Nitab4.5_0000170g0140 Nicotiana tabacum HOM05D006136 ORTHO05D007244 1.7e-28 131.3 219 37.4
AT5G58130 Arabidopsis thaliana HOM05D006136 ORTHO05D007244 2.3e-28 131.0 317 33.4
AUR62039148 Chenopodium quinoa HOM05D006136 ORTHO05D007244 2.3e-28 131.0 363 31.4
AL8G34230 Arabidopsis lyrata HOM05D006136 ORTHO05D007244 3.0e-28 130.6 273 35.9
Sp6g19810 Schrenkiella parvula HOM05D006136 ORTHO05D007244 5.0e-28 129.8 315 34.6
Lj1g0026291 Lotus japonicus HOM05D006136 ORTHO05D007244 6.6e-28 129.4 237 37.6
FAN22G1396 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.9e-27 127.9 400 27.5
C09p50030 Brassica napus HOM05D006136 ORTHO05D007244 5.6e-27 126.3 268 35.8
BolC9t57856H Brassica oleracea HOM05D006136 ORTHO05D007244 5.6e-27 126.3 268 35.8
Thhalv10012942m.g Eutrema salsugineum HOM05D006136 ORTHO05D007244 9.5e-27 125.6 327 32.7
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 1.2e-26 125.2 399 30.3
SEGI_05126 Sequoiadendron giganteum HOM05D006136 ORTHO05D007244 1.2e-26 125.2 163 46.0
RcHm_v2.0_Chr5g0003141 Rosa chinensis HOM05D006136 ORTHO05D007244 8.1e-26 122.5 303 31.7
PGR044G0304 Punica granatum HOM05D006136 ORTHO05D007244 3.4e-24 117.1 236 36.9
SGA_v2.0_scaffold21G09584 Striga asiatica HOM05D006136 ORTHO05D007244 2.0e-16 91.3 548 25.2
arahy.Tifrunner.gnm1.ann1.27MYTD Arachis hypogaea HOM05D006136 ORTHO05D007244 6.4e-15 86.3 77 53.2
AagrBONN_evm.TU.Sc2ySwM_228.2439 Anthoceros agrestis HOM05D006136 ORTHO05D007244 1.9e-14 84.7 102 44.1
Glyma.07G231200 Glycine max HOM05D003235 ORTHO05D007244 7.1e-14 82.8 83 50.6
Mapoly0169s0023 Marchantia polymorpha HOM05D006136 ORTHO05D007244 4.6e-13 80.1 170 31.8
SMO367G1245 Selaginella moellendorffii HOM05D006136 ORTHO05D007244 1.1e-11 75.5 107 42.1
arahy.Tifrunner.gnm1.ann1.SWI1TY Arachis hypogaea HOM05D006136 ORTHO05D007244 5.6e-11 73.2 244 29.5
arahy.Tifrunner.gnm1.ann1.Q88MA9 Arachis hypogaea HOM05D006136 ORTHO05D007244 6.2e-10 69.7 52 57.7
arahy.Tifrunner.gnm1.ann1.QC7K1D Arachis hypogaea HOM05D006136 ORTHO05D007244 4.0e-09 67.0 32 84.4
MBI16_g40728_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 1.3e-07 62.0 71 42.3
CBR_g39420 Chara braunii HOM05D006136 ORTHO05D007244 3.8e-07 60.5 128 33.6


User provided reference genes

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