Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 1.5e-261 905.6 455 100.0
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 2.8e-146 522.7 418 66.0
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 5.3e-145 518.5 469 61.0
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 1.5e-144 516.9 481 59.5
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 3.4e-144 515.8 480 59.0
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 5.5e-142 508.4 480 58.1
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 3.6e-141 505.8 479 58.2
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 6.1e-141 505.0 482 58.5
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 2.3e-140 503.1 511 55.8
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 3.7e-138 495.7 511 54.8
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 6.3e-138 495.0 511 54.8
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 6.3e-138 495.0 500 55.8
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 6.3e-138 495.0 513 54.6
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 1.4e-137 493.8 432 61.1
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 2.4e-137 493.0 503 54.5
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 7.0e-137 491.5 481 57.8
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 9.1e-137 491.1 509 54.0
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 1.2e-136 490.7 482 56.2
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 2.0e-136 490.0 475 57.3
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 2.6e-136 489.6 511 54.0
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 2.6e-136 489.6 510 55.1
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 3.5e-136 489.2 486 57.4
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 5.9e-136 488.4 511 54.6
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 1.7e-135 486.9 512 54.3
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 5.0e-135 485.3 497 54.9
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 5.0e-135 485.3 478 57.3
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 3.2e-134 482.6 512 54.7
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 3.2e-134 482.6 471 57.1
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 5.5e-134 481.9 516 53.1
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 5.5e-134 481.9 516 53.1
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 1.6e-133 480.3 455 59.6
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 2.1e-133 479.9 511 53.4
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 2.1e-133 479.9 505 53.7
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 2.7e-133 479.6 512 53.9
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 1.8e-132 476.9 511 54.0
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.0e-132 476.1 500 54.0
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 4.0e-132 475.7 449 58.1
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 5.2e-132 475.3 491 54.8
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 6.7e-132 474.9 476 55.9
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 8.8e-132 474.6 500 53.8
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.0e-131 473.4 484 53.7
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.3e-131 472.6 500 54.0
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 3.3e-131 472.6 478 55.6
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 1.3e-130 470.7 516 52.3
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.2e-130 469.9 499 54.7
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.8e-130 469.5 500 53.6
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 2.8e-130 469.5 447 56.4
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 1.4e-129 467.2 459 56.2
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 2.4e-129 466.5 508 53.1
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 3.1e-129 466.1 539 51.0
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 5.3e-129 465.3 510 51.6
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 9.1e-129 464.5 448 55.6
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 1.6e-128 463.8 489 55.4
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 4.5e-128 462.2 504 53.4
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 5.9e-128 461.8 505 52.7
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 5.9e-128 461.8 436 57.8
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 1.3e-127 460.7 501 55.3
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 1.3e-127 460.7 512 51.6
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.7e-127 460.3 480 53.5
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 2.2e-127 459.9 436 57.1
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 2.2e-127 459.9 416 61.3
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 5.0e-127 458.8 511 53.0
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 6.5e-127 458.4 510 52.4
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 6.5e-127 458.4 510 52.4
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 8.5e-127 458.0 508 52.4
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 8.5e-127 458.0 508 52.4
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 7.2e-126 454.9 457 55.8
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 2.7e-125 453.0 469 54.8
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 4.7e-125 452.2 497 51.9
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 6.1e-125 451.8 467 53.3
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 8.0e-125 451.4 511 52.1
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 1.0e-124 451.1 522 50.2
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 1.0e-124 451.1 510 52.0
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 1.4e-124 450.7 469 52.2
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 2.3e-124 449.9 465 53.3
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 5.2e-124 448.7 465 53.1
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 1.2e-123 447.6 466 53.4
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 1.2e-123 447.6 455 54.9
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 1.2e-123 447.6 501 52.3
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 2.0e-123 446.8 465 52.9
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 2.0e-123 446.8 447 54.6
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 2.6e-123 446.4 520 49.8
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 3.4e-123 446.0 475 52.2
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.8e-122 443.0 511 51.3
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 3.7e-122 442.6 515 50.3
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 3.7e-122 442.6 468 52.6
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 3.7e-122 442.6 507 50.7
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 4.8e-122 442.2 501 51.9
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 1.1e-121 441.0 463 55.5
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 1.6e-120 437.2 476 52.5
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 7.7e-120 434.9 435 55.4
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 8.6e-119 431.4 419 56.1
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 3.0e-116 422.9 477 49.3
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 1.3e-114 417.5 438 53.2
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 4.1e-113 412.5 451 53.9
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 3.5e-112 409.5 417 53.2
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 4.3e-110 402.5 394 55.6
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 2.4e-105 386.7 445 51.2
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 5.6e-102 375.6 478 45.4
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 1.4e-100 370.9 486 44.7
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 3.6e-93 346.3 423 48.5
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 8.1e-93 345.1 487 43.7
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 3.1e-92 343.2 496 45.0
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 1.7e-90 337.4 579 39.7
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 2.2e-90 337.0 287 63.1
Hma1.2p1_0481F.1_g162010 Hydrangea macrophylla HOM05D003939 ORTHO05D005979 2.5e-86 323.6 375 50.7
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 2.5e-86 323.6 393 48.3
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 3.3e-86 323.2 284 60.6
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 2.6e-75 287.0 472 38.1
SEGI_32509 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 1.9e-73 280.8 251 56.6
Psat0s5863g0040 Pisum sativum HOM05D003939 ORTHO05D005979 1.7e-66 257.7 241 60.2
HPP92_012255 Vanilla planifolia HOM05D003939 ORTHO05D005979 1.2e-43 181.8 369 36.9
MCO01G540 Micromonas commoda HOM05D003939 ORTHO05D005979 1.3e-37 161.8 398 28.4
Psat0s9359g0040 Pisum sativum HOM05D003939 ORTHO05D005979 1.8e-36 157.9 168 51.8
CSS0004390 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.2e-32 145.2 241 40.7
CiPaw.03G089700 Carya illinoinensis HOM05D003939 ORTHO05D005979 2.7e-32 144.1 158 50.6
TPR.G3973 Trifolium pratense HOM05D003939 ORTHO05D005979 1.5e-22 111.7 153 44.4
Cpa.g.sc14.167 Carica papaya HOM05D003939 ORTHO05D005979 1.8e-20 104.8 114 51.8
DCAR_026524 Daucus carota HOM05D003939 ORTHO05D005979 1.7e-18 98.2 79 65.8
MELO3C001621.2 Cucumis melo HOM05D003939 ORTHO05D005979 3.2e-17 94.0 78 64.1
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 1.6e-16 91.7 94 55.3
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 4.7e-16 90.1 94 54.3
TAR629G0495 Trochodendron aralioides HOM05D003939 ORTHO05D005979 6.1e-16 89.7 59 72.9
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 4.5e-11 73.6 88 50.0
MELO3C001721.2 Cucumis melo HOM05D003939 ORTHO05D005979 8.5e-10 69.3 61 63.9
Cre06.g278269 Chlamydomonas reinhardtii HOM05D003939 ORTHO05D005979 2.5e-09 67.8 403 23.1
EL10Ac2g03124 Beta vulgaris HOM05D005544 ORTHO05D007303 1.6e-08 65.1 112 37.5


User provided reference genes

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