Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 4.0e-235 817.8 427 100.0
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 8.2e-180 634.0 427 80.6
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 5.7e-141 505.0 433 66.3
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 3.8e-137 492.3 439 63.6
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 5.5e-136 488.4 439 63.1
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 8.8e-134 481.1 440 62.7
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 3.4e-133 479.2 432 62.5
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.1e-131 474.2 433 62.1
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 4.1e-131 472.2 425 63.8
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 7.0e-131 471.5 431 61.7
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.0e-130 469.9 431 61.5
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 2.7e-130 469.5 432 61.3
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 7.7e-130 468.0 435 61.8
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 7.7e-130 468.0 409 63.8
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.0e-129 467.6 395 65.3
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 2.9e-129 466.1 391 66.2
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 3.8e-129 465.7 396 66.2
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 5.5e-128 461.8 427 62.3
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 7.2e-128 461.5 393 65.1
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 1.2e-127 460.7 429 61.5
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 2.1e-127 459.9 424 60.1
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 3.6e-127 459.1 388 65.5
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.0e-126 457.6 436 60.3
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 1.4e-126 457.2 392 65.8
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 1.8e-126 456.8 436 60.6
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 1.8e-126 456.8 385 64.9
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 2.3e-126 456.4 398 64.1
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.3e-126 456.4 426 62.2
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 5.2e-126 455.3 430 60.5
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 6.8e-126 454.9 436 60.8
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 1.5e-125 453.8 440 58.6
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 2.6e-125 453.0 396 62.9
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 4.9e-124 448.7 434 59.4
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 4.9e-124 448.7 435 58.9
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 6.3e-124 448.4 434 59.2
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.1e-123 447.6 390 63.3
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 1.8e-123 446.8 395 62.0
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 2.0e-122 443.4 427 60.4
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 4.5e-122 442.2 379 65.4
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 5.9e-122 441.8 387 61.8
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.0e-121 441.0 393 61.6
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 1.3e-121 440.7 399 61.4
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 2.9e-121 439.5 402 61.2
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 3.8e-121 439.1 400 61.0
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 8.6e-121 438.0 443 57.1
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 1.1e-120 437.6 389 62.2
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.5e-120 437.2 387 63.3
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.9e-120 436.8 394 63.2
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.9e-120 436.8 403 60.0
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 2.5e-120 436.4 391 62.4
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 1.0e-118 431.0 417 60.0
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.4e-118 430.6 394 59.9
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 4.0e-118 429.1 381 61.2
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 8.9e-118 427.9 430 57.2
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 1.5e-117 427.2 438 58.0
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 5.8e-117 425.2 392 61.0
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 9.8e-117 424.5 534 50.7
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 2.2e-116 423.3 369 62.9
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 3.7e-116 422.5 361 65.9
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.4e-115 420.6 424 57.8
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 9.2e-115 417.9 420 57.6
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 1.6e-114 417.2 524 51.0
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 6.0e-114 415.2 422 57.3
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 1.0e-113 414.5 519 51.4
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 1.3e-113 414.1 405 57.3
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 3.0e-113 412.9 381 60.1
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 5.0e-113 412.1 555 47.9
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 1.4e-110 404.1 428 54.2
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 2.0e-109 400.2 381 58.8
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 2.9e-108 396.4 425 58.1
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 9.2e-107 391.3 436 55.7
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.2e-106 391.0 427 52.9
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 2.1e-106 390.2 437 51.9
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 1.5e-104 384.0 428 52.8
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 3.3e-104 382.9 387 57.1
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 3.3e-104 382.9 414 55.8
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 4.3e-104 382.5 436 53.4
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 6.8e-102 375.2 327 64.8
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 9.9e-101 371.3 422 51.9
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 5.1e-97 359.0 415 54.2
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 4.3e-96 355.9 424 52.4
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 2.4e-94 350.1 413 52.3
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 6.8e-94 348.6 420 52.1
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 1.7e-92 344.0 307 63.2
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 1.1e-91 341.3 437 50.6
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 1.2e-90 337.8 378 51.9
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.3e-89 334.3 347 57.3
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.7e-89 334.0 346 58.4
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 2.3e-89 333.6 342 55.6
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 3.0e-89 333.2 347 55.9
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 6.6e-89 332.0 314 58.9
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 6.6e-89 332.0 343 58.0
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 1.1e-88 331.3 379 50.4
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.9e-88 330.5 377 50.9
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 2.5e-88 330.1 307 59.0
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 5.6e-88 328.9 353 54.7
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 3.6e-87 326.2 296 60.1
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 3.1e-86 323.2 337 55.8
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 9.0e-86 321.6 312 59.0
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.3e-84 317.8 304 57.9
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 8.4e-84 315.1 301 58.5
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.2e-82 311.2 295 57.6
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 6.0e-82 308.9 334 54.5
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 1.3e-79 301.2 432 43.3
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 9.0e-78 295.0 299 55.5
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 1.5e-77 294.3 302 54.6
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 1.3e-73 281.2 377 47.5
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 2.6e-69 266.9 304 54.3
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 9.3e-59 231.9 206 61.7
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 6.1e-58 229.2 328 46.0
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 1.2e-50 204.9 231 55.0
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 6.3e-47 192.6 173 61.8
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 6.9e-46 189.1 320 36.9
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 2.0e-45 187.6 277 41.9
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.1e-40 171.8 300 44.0
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 3.0e-33 147.1 139 56.8
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 2.2e-31 141.0 84 83.3
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.8e-31 140.6 81 85.2
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 7.0e-30 136.0 81 85.2
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 1.0e-28 132.1 83 80.7
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 1.7e-28 131.3 81 82.7
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 2.9e-28 130.6 78 83.3
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 6.5e-28 129.4 89 75.3
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 8.5e-28 129.0 84 78.6
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 1.5e-27 128.3 81 77.8
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 3.2e-27 127.1 81 79.0
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.2e-26 125.2 81 75.3
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 1.2e-26 125.2 84 76.2
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 1.6e-26 124.8 81 81.5
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 2.1e-26 124.4 81 77.8
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 4.8e-23 113.2 313 33.5
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 5.5e-11 73.2 87 47.1
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 4.7e-10 70.1 56 64.3
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.4e-09 68.6 41 78.0
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.8e-09 68.2 96 45.8
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.7e-07 61.6 56 53.6
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.8e-06 58.2 31 83.9


User provided reference genes

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