Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 3.6e-82 308.1 149 100.0
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 2.3e-60 235.7 136 84.6
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 2.2e-39 166.0 130 64.6
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 2.4e-38 162.5 128 62.5
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 8.6e-36 154.1 131 61.8
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 2.5e-35 152.5 109 67.0
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 4.3e-35 151.8 134 59.0
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 2.1e-34 149.4 110 66.4
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 2.8e-34 149.1 141 53.2
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 4.7e-34 148.3 134 60.4
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 6.2e-34 147.9 131 61.8
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 8.1e-34 147.5 129 61.2
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 8.1e-34 147.5 117 65.8
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 1.1e-33 147.1 121 60.3
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 1.1e-33 147.1 132 59.8
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 1.4e-33 146.7 132 59.8
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 1.4e-33 146.7 132 59.1
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 1.4e-33 146.7 122 59.8
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 1.8e-33 146.4 125 60.0
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 1.8e-33 146.4 131 58.0
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 3.1e-33 145.6 111 65.8
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 4.0e-33 145.2 129 58.9
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 6.8e-33 144.4 120 60.8
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 6.8e-33 144.4 125 60.0
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 8.9e-33 144.1 120 60.8
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 8.9e-33 144.1 113 61.9
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 1.2e-32 143.7 137 53.3
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 1.2e-32 143.7 137 54.7
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 1.2e-32 143.7 140 55.7
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 1.5e-32 143.3 140 54.3
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 1.5e-32 143.3 122 58.2
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 2.0e-32 142.9 147 56.5
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 2.0e-32 142.9 147 56.5
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 2.0e-32 142.9 129 58.1
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 2.0e-32 142.9 130 57.7
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 2.0e-32 142.9 122 58.2
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 4.4e-32 141.7 146 56.2
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 4.4e-32 141.7 96 67.7
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 4.4e-32 141.7 131 55.7
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 4.4e-32 141.7 131 57.3
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 5.8e-32 141.4 110 62.7
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 5.8e-32 141.4 142 55.6
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 5.8e-32 141.4 132 56.1
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 5.8e-32 141.4 134 55.2
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 5.8e-32 141.4 141 53.9
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 7.6e-32 141.0 138 56.5
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 9.9e-32 140.6 107 66.4
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 9.9e-32 140.6 134 57.5
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 1.3e-31 140.2 126 55.6
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 1.3e-31 140.2 156 51.9
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 1.3e-31 140.2 123 58.5
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 1.7e-31 139.8 113 61.1
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.7e-31 139.8 137 54.7
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.7e-31 139.8 137 54.7
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 1.7e-31 139.8 123 58.5
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 1.7e-31 139.8 133 55.6
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 1.7e-31 139.8 133 55.6
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 1.7e-31 139.8 126 57.9
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 2.2e-31 139.4 135 54.8
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 2.9e-31 139.0 112 61.6
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 2.9e-31 139.0 137 54.7
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 3.8e-31 138.7 129 56.6
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 3.8e-31 138.7 110 62.7
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 3.8e-31 138.7 123 55.3
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 4.9e-31 138.3 150 53.3
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 4.9e-31 138.3 136 55.9
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 6.4e-31 137.9 137 54.0
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 8.4e-31 137.5 130 55.4
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 8.4e-31 137.5 143 51.7
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 1.1e-30 137.1 135 52.6
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 1.4e-30 136.7 139 56.1
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 1.9e-30 136.3 135 53.3
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 2.4e-30 136.0 107 62.6
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 3.2e-30 135.6 138 53.6
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 3.2e-30 135.6 143 52.4
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 3.2e-30 135.6 144 54.9
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 4.1e-30 135.2 141 51.1
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 5.4e-30 134.8 133 54.1
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 7.1e-30 134.4 134 55.2
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 2.1e-29 132.9 131 57.3
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 2.7e-29 132.5 152 49.3
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 2.7e-29 132.5 131 54.2
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 2.7e-29 132.5 106 62.3
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 2.7e-29 132.5 106 62.3
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 2.7e-29 132.5 142 52.1
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 3.5e-29 132.1 99 63.6
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 3.5e-29 132.1 100 63.0
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 3.5e-29 132.1 143 51.0
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 4.6e-29 131.7 139 51.1
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 1.3e-28 130.2 147 51.7
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 1.3e-28 130.2 141 51.1
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 1.7e-28 129.8 129 52.7
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 5.1e-28 128.3 177 43.5
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 6.6e-28 127.9 90 63.3
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 2.6e-24 115.9 66 80.3
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 5.8e-24 114.8 69 73.9
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 7.6e-24 114.4 93 57.0
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-23 113.6 72 70.8
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 1.1e-22 110.5 102 53.9
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 1.9e-22 109.8 112 50.9
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 1.1e-19 100.5 163 40.5
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 3.3e-19 99.0 109 51.4
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 7.3e-19 97.8 134 43.3
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 7.3e-19 97.8 134 43.3
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 1.3e-18 97.1 100 50.0
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 4.0e-17 92.0 134 41.0
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 4.5e-16 88.6 53 73.6
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 4.5e-16 88.6 53 73.6
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 5.8e-16 88.2 103 51.5
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 1.7e-15 86.7 122 45.9
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.1e-14 84.0 101 42.6
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 5.3e-09 65.1 123 35.0


User provided reference genes

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