Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0045 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 9.6e-106 386.7 180 100.0
CDE12G0633 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 2.2e-78 295.8 155 89.7
MBI03_g20877_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 1.3e-62 243.4 157 67.5
CAN.G1330.38 Capsicum annuum HOM05D000572 ORTHO05D002399 9.1e-56 220.7 156 60.3
Haze_19377 Corylus avellana HOM05D000572 ORTHO05D002399 2.6e-55 219.2 170 57.6
Nn5g27348 Nelumbo nucifera HOM05D000572 ORTHO05D002399 5.9e-55 218.0 151 61.6
Nn5g27349 Nelumbo nucifera HOM05D000572 ORTHO05D002399 5.9e-55 218.0 151 61.6
Peaxi162Scf01053g00039 Petunia axillaris HOM05D000572 ORTHO05D002399 1.0e-54 217.2 156 60.9
Nitab4.5_0004640g0010 Nicotiana tabacum HOM05D000572 ORTHO05D002399 1.3e-54 216.9 156 59.0
Solyc11g030600.3 Solanum lycopersicum HOM05D000572 ORTHO05D002399 1.3e-54 216.9 156 59.6
Sopen11g013460 Solanum pennellii HOM05D000572 ORTHO05D002399 1.3e-54 216.9 156 59.6
Duzib147G0313 Durio zibethinus HOM05D000572 ORTHO05D002399 3.8e-54 215.3 156 59.6
Zm00001eb301620 Zea mays HOM05D000572 ORTHO05D002399 3.8e-54 215.3 148 61.5
Zm00001eb301630 Zea mays HOM05D000572 ORTHO05D002399 3.8e-54 215.3 148 61.5
Nitab4.5_0004345g0030 Nicotiana tabacum HOM05D000572 ORTHO05D002399 6.5e-54 214.5 156 58.3
Dinv19128 Davidia involucrata HOM05D000572 ORTHO05D002399 8.5e-54 214.2 156 59.6
Ca_03350_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 1.1e-53 213.8 160 58.8
Lj3g0025806 Lotus japonicus HOM05D000572 ORTHO05D002399 1.9e-53 213.0 160 57.5
Gorai.012G048000 Gossypium raimondii HOM05D000572 ORTHO05D002399 2.5e-53 212.6 158 58.2
CiPaw.12G053900 Carya illinoinensis HOM05D000572 ORTHO05D002399 3.2e-53 212.2 167 55.1
DCAR_009626 Daucus carota HOM05D000572 ORTHO05D002399 3.2e-53 212.2 156 61.5
Gohir.D04G042500 Gossypium hirsutum HOM05D000572 ORTHO05D002399 3.2e-53 212.2 158 58.2
Gohir.A05G373000 Gossypium hirsutum HOM05D000572 ORTHO05D002399 5.5e-53 211.5 158 57.6
Os07g0182900 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 5.5e-53 211.5 148 60.1
arahy.Tifrunner.gnm1.ann1.I0VWWF Arachis hypogaea HOM05D000572 ORTHO05D002399 9.4e-53 210.7 154 60.4
PGR119G1310 Punica granatum HOM05D000572 ORTHO05D002399 9.4e-53 210.7 157 59.2
Lj2g0020412 Lotus japonicus HOM05D000572 ORTHO05D002399 1.2e-52 210.3 163 57.7
QL10p035076 Quercus lobata HOM05D000572 ORTHO05D002399 1.2e-52 210.3 162 54.9
Manes.13G155232 Manihot esculenta HOM05D000572 ORTHO05D002399 2.1e-52 209.5 156 56.4
arahy.Tifrunner.gnm1.ann1.5512QZ Arachis hypogaea HOM05D000572 ORTHO05D002399 2.7e-52 209.1 154 59.7
VMungo0464G1362 Vigna mungo HOM05D000572 ORTHO05D002399 3.6e-52 208.8 160 57.5
MSTRG.27892 Avicennia marina HOM05D000572 ORTHO05D002399 7.9e-52 207.6 156 58.3
DCAR_019941 Daucus carota HOM05D000572 ORTHO05D002399 7.9e-52 207.6 156 59.6
Lalb_Chr01g0008651 Lupinus albus HOM05D000572 ORTHO05D002399 7.9e-52 207.6 162 56.8
Medtr6g065580 Medicago truncatula HOM05D000572 ORTHO05D002399 7.9e-52 207.6 155 59.4
Migut.N00875 Erythranthe guttata HOM05D000572 ORTHO05D002399 1.0e-51 207.2 156 58.3
Manes.13G119400 Manihot esculenta HOM05D000572 ORTHO05D002399 1.0e-51 207.2 155 56.1
Cc07_g19880 Coffea canephora HOM05D000572 ORTHO05D002399 1.4e-51 206.8 155 57.4
PGSC0003DMG400030941 Solanum tuberosum HOM05D000572 ORTHO05D002399 1.8e-51 206.5 145 60.0
Thecc.01G144800 Theobroma cacao HOM05D000572 ORTHO05D002399 1.8e-51 206.5 158 56.3
Dinv29674 Davidia involucrata HOM05D000572 ORTHO05D002399 3.0e-51 205.7 165 55.2
Phvul.004G133200 Phaseolus vulgaris HOM05D000572 ORTHO05D002399 3.0e-51 205.7 169 52.1
Ciclev10027585m.g Citrus clementina HOM05D000572 ORTHO05D002399 5.2e-51 204.9 155 58.1
Lalb_Chr03g0033391 Lupinus albus HOM05D000572 ORTHO05D002399 8.8e-51 204.1 161 55.3
HPP92_005786 Vanilla planifolia HOM05D000572 ORTHO05D002399 8.8e-51 204.1 148 55.4
Glyma.04G187600 Glycine max HOM05D000572 ORTHO05D002399 2.6e-50 202.6 161 55.9
Sabra04G0084200 Salix brachista HOM05D000572 ORTHO05D002399 2.6e-50 202.6 156 55.1
Medtr3g026210 Medicago truncatula HOM05D000572 ORTHO05D002399 3.3e-50 202.2 155 58.1
Oeu032220.1 Olea europaea HOM05D000572 ORTHO05D002399 3.3e-50 202.2 156 56.4
Eucgr.I00036 Eucalyptus grandis HOM05D000572 ORTHO05D002399 4.4e-50 201.8 158 57.6
Os03g0798300 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 4.4e-50 201.8 148 60.1
THA.LOC104820805 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 4.4e-50 201.8 161 52.2
TWI63G0302 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 4.4e-50 201.8 155 57.4
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 4.4e-50 201.8 155 56.8
Lj5g0006387 Lotus japonicus HOM05D000572 ORTHO05D002399 5.7e-50 201.4 160 57.5
ECA236G0624 Erigeron canadensis HOM05D000572 ORTHO05D002399 7.4e-50 201.1 151 58.3
Aqoxy7G03575 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 9.7e-50 200.7 154 60.4
Cpa.g.sc37.192 Carica papaya HOM05D000572 ORTHO05D002399 1.7e-49 199.9 163 52.8
Medtr2g046020 Medicago truncatula HOM05D000572 ORTHO05D002399 1.7e-49 199.9 155 58.1
THA.LOC104823726 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 1.7e-49 199.9 161 52.8
SGA_v2.0_scaffold8G04469 Striga asiatica HOM05D000572 ORTHO05D002399 2.2e-49 199.5 166 54.2
TPR.G37134 Trifolium pratense HOM05D000572 ORTHO05D002399 2.2e-49 199.5 155 55.5
Potri.018G138000 Populus trichocarpa HOM05D000572 ORTHO05D002399 2.8e-49 199.1 156 53.8
TWI15G0599 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 2.8e-49 199.1 155 56.1
Potri.T046100 Populus trichocarpa HOM05D000572 ORTHO05D002399 4.8e-49 198.4 156 53.2
Sabra19G0000100 Salix brachista HOM05D000572 ORTHO05D002399 4.8e-49 198.4 156 53.2
HanXRQChr11g0347301 Helianthus annuus HOM05D000572 ORTHO05D002399 8.2e-49 197.6 151 57.0
Aqoxy7G03579 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.1e-48 197.2 154 59.7
Glyma.06G178200 Glycine max HOM05D000572 ORTHO05D002399 1.1e-48 197.2 161 53.4
Potri.004G134000 Populus trichocarpa HOM05D000572 ORTHO05D002399 1.1e-48 197.2 156 53.2
TPR.G12077 Trifolium pratense HOM05D000572 ORTHO05D002399 1.4e-48 196.8 135 60.0
Lj2A766T19 Lonicera japonica HOM05D000572 ORTHO05D002399 2.4e-48 196.1 155 56.8
PSO210G2968 Papaver somniferum HOM05D000572 ORTHO05D002399 4.1e-48 195.3 156 58.3
VMungo0464G1539 Vigna mungo HOM05D000572 ORTHO05D002399 4.1e-48 195.3 159 57.2
Atru.chr1.1803 Acer truncatum HOM05D000572 ORTHO05D002399 1.2e-47 193.7 155 55.5
Lsat_1_v5_gn_7_75121 Lactuca sativa HOM05D000572 ORTHO05D002399 1.6e-47 193.4 151 58.9
ClCG11G000400 Citrullus lanatus HOM05D000572 ORTHO05D002399 2.0e-47 193.0 155 52.9
Prupe.7G183100 Prunus persica HOM05D000572 ORTHO05D002399 4.5e-47 191.8 156 55.1
TAR628G1524 Trochodendron aralioides HOM05D000572 ORTHO05D002399 7.7e-47 191.0 156 55.1
Sed0009647 Sechium edule HOM05D000572 ORTHO05D002399 1.0e-46 190.7 156 53.2
PSO447G0024 Papaver somniferum HOM05D000572 ORTHO05D002399 1.7e-46 189.9 156 57.1
CANSAT01G1917 Cannabis sativa HOM05D000572 ORTHO05D002399 2.2e-46 189.5 157 54.8
CAN.G868.5 Capsicum annuum HOM05D000572 ORTHO05D002399 2.2e-46 189.5 125 62.4
MELO3C026448.2 Cucumis melo HOM05D000572 ORTHO05D002399 2.9e-46 189.1 155 51.0
HanXRQChr04g0120041 Helianthus annuus HOM05D000572 ORTHO05D002399 3.8e-46 188.7 151 55.0
Aqoxy1G02545 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.5e-45 186.8 154 56.5
CSS0016257 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.5e-45 186.8 156 52.6
CSS0042457 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.5e-45 186.8 156 52.6
CsaV3_5G013990 Cucumis sativus L. HOM05D000572 ORTHO05D002399 1.9e-45 186.4 155 50.3
Sp4g01970 Schrenkiella parvula HOM05D000572 ORTHO05D002399 1.9e-45 186.4 157 49.7
TPR.G31040 Trifolium pratense HOM05D000572 ORTHO05D002399 2.5e-45 186.0 161 52.2
Atru.chr12.1878 Acer truncatum HOM05D000572 ORTHO05D002399 3.2e-45 185.7 155 53.5
CARHR182510 Cardamine hirsuta HOM05D000572 ORTHO05D002399 4.2e-45 185.3 152 53.3
AT5G49160 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 5.5e-45 184.9 166 47.6
Sc02g0000170 Simmondsia chinensis HOM05D000572 ORTHO05D002399 7.2e-45 184.5 150 52.0
Thhalv10003514m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 1.2e-44 183.7 151 53.0
AL8G22690 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 2.1e-44 183.0 165 48.5
Rhsim11G0118300 Rhododendron simsii HOM05D000572 ORTHO05D002399 2.1e-44 183.0 156 52.6
MD02G1115100 Malus domestica HOM05D000572 ORTHO05D002399 3.6e-44 182.2 156 53.2
SGA_v2.0_scaffold122G33283 Striga asiatica HOM05D000572 ORTHO05D002399 3.6e-44 182.2 155 51.0
vmacro01683 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 3.6e-44 182.2 156 52.6
Carub.0004s0387 Capsella rubella HOM05D000572 ORTHO05D002399 8.0e-44 181.0 158 51.9
AUR62021310 Chenopodium quinoa HOM05D000572 ORTHO05D002399 8.0e-44 181.0 170 49.4
Lj5A282T76 Lonicera japonica HOM05D000572 ORTHO05D002399 8.0e-44 181.0 151 51.7
AT4G14140 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.0e-43 180.6 156 53.8
CARHR070500 Cardamine hirsuta HOM05D000572 ORTHO05D002399 1.4e-43 180.3 156 51.9
MD15G1231100 Malus domestica HOM05D000572 ORTHO05D002399 2.3e-43 179.5 156 51.9
AUR62043444 Chenopodium quinoa HOM05D000572 ORTHO05D002399 3.0e-43 179.1 151 52.3
EL10Ac8g18295 Beta vulgaris HOM05D000572 ORTHO05D002399 4.0e-43 178.7 150 51.3
AUR62001561 Chenopodium quinoa HOM05D000572 ORTHO05D002399 4.0e-43 178.7 155 49.7
DCAR_003283 Daucus carota HOM05D000572 ORTHO05D002399 4.0e-43 178.7 150 52.7
Hund15395 Selenicereus undatus HOM05D000572 ORTHO05D002399 4.0e-43 178.7 156 50.6
Sp2g19890 Schrenkiella parvula HOM05D000572 ORTHO05D002399 6.7e-43 177.9 151 50.3
AT4G08990 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 8.8e-43 177.6 151 55.6
AL7G42360 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 2.6e-42 176.0 158 51.9
AL7G42980 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 4.4e-42 175.3 158 51.9
Carub.0008s0898 Capsella rubella HOM05D000572 ORTHO05D002399 4.4e-42 175.3 151 50.3
SHI05188 Sapria himalayana HOM05D000572 ORTHO05D002399 5.7e-42 174.9 157 50.3
Ah.04g152120 Amaranthus hybridus HOM05D000572 ORTHO05D002399 9.7e-42 174.1 147 52.4
BcaC07g41015 Brassica carinata HOM05D000572 ORTHO05D002399 4.8e-41 171.8 157 43.9
ATR0584G123 Amborella trichopoda HOM05D000572 ORTHO05D002399 6.3e-41 171.4 158 50.6
C08p40170 Brassica napus HOM05D000572 ORTHO05D002399 6.3e-41 171.4 157 43.9
BolC8t51587H Brassica oleracea HOM05D000572 ORTHO05D002399 6.3e-41 171.4 157 43.9
RcHm_v2.0_Chr2g0097141 Rosa chinensis HOM05D000572 ORTHO05D002399 5.3e-40 168.3 158 47.5
FAN19G1502 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.2e-39 167.2 158 49.4
FAN26G0750 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.2e-39 167.2 158 49.4
FvH4_1g10300 Fragaria vesca HOM05D000572 ORTHO05D002399 1.6e-39 166.8 158 48.7
Ah.01g020670 Amaranthus hybridus HOM05D000572 ORTHO05D002399 5.9e-39 164.9 135 50.4
Thhalv10005683m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 5.9e-39 164.9 156 50.6
CARHR287820 Cardamine hirsuta HOM05D000572 ORTHO05D002399 1.0e-38 164.1 156 48.1
A09p57170 Brassica napus HOM05D000572 ORTHO05D002399 1.7e-38 163.3 158 41.8
BraA09t41110Z Brassica rapa HOM05D000572 ORTHO05D002399 1.7e-38 163.3 158 41.8
RcHm_v2.0_Chr5g0051581 Rosa chinensis HOM05D000572 ORTHO05D002399 5.0e-38 161.8 158 49.4
Aa31LG11G8250 Aethionema arabicum HOM05D000572 ORTHO05D002399 1.1e-37 160.6 131 51.1
SEGI_11646 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.9e-37 159.8 152 48.7
Cc02_g23510 Coffea canephora HOM05D000572 ORTHO05D002399 2.5e-37 159.5 156 42.9
BraA04t17374Z Brassica rapa HOM05D000572 ORTHO05D002399 7.2e-37 157.9 155 45.8
SEGI_36703 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 7.2e-37 157.9 135 49.6
BolC4t26803H Brassica oleracea HOM05D000572 ORTHO05D002399 1.2e-36 157.1 155 47.1
Psat3g159080 Pisum sativum HOM05D000572 ORTHO05D002399 1.6e-36 156.8 154 51.3
GSVIVG01000263001 Vitis vinifera HOM05D000572 ORTHO05D002399 2.1e-36 156.4 138 52.9
C04p52290 Brassica napus HOM05D000572 ORTHO05D002399 3.6e-36 155.6 155 46.5
BcaC02g08585 Brassica carinata HOM05D000572 ORTHO05D002399 4.7e-36 155.2 155 46.5
vmacro19834 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 4.7e-36 155.2 148 46.6
SEGI_20274 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.8e-35 153.3 135 49.6
BcaB06g27851 Brassica carinata HOM05D000572 ORTHO05D002399 6.8e-35 151.4 161 44.1
AUR62028017 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.5e-34 150.2 156 43.6
AagrBONN_evm.TU.Sc2ySwM_368.2421 Anthoceros agrestis HOM05D000572 ORTHO05D002399 2.8e-33 146.0 130 47.7
Psat3g159120 Pisum sativum HOM05D000572 ORTHO05D002399 1.4e-32 143.7 182 41.8
Oeu046383.1 Olea europaea HOM05D000572 ORTHO05D002399 1.8e-32 143.3 120 52.5
Thhalv10000011m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 2.0e-31 139.8 133 47.4
GSVIVG01000262001 Vitis vinifera HOM05D000572 ORTHO05D002399 3.5e-31 139.0 86 64.0
CARHR185430 Cardamine hirsuta HOM05D000572 ORTHO05D002399 4.5e-31 138.7 153 43.1
QL02p103162 Quercus lobata HOM05D000572 ORTHO05D002399 1.7e-30 136.7 110 51.8
FAN11G2057 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.1e-29 134.0 155 38.7
SMO358G0070 Selaginella moellendorffii HOM05D000572 ORTHO05D002399 1.1e-29 134.0 131 42.0
Carub.0007s2893 Capsella rubella HOM05D000572 ORTHO05D002399 7.2e-29 131.3 130 46.2
Ciclev10003166m.g Citrus clementina HOM05D000572 ORTHO05D002399 2.6e-26 122.9 152 40.8
Ciclev10003543m.g Citrus clementina HOM05D000572 ORTHO05D002399 2.6e-26 122.9 83 61.4
AT4G13610 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 7.0e-24 114.8 86 61.6
TAR633G0967 Trochodendron aralioides HOM05D000572 ORTHO05D002399 3.5e-23 112.5 61 77.0
HPP92_005801 Vanilla planifolia HOM05D000572 ORTHO05D002399 8.6e-22 107.8 84 53.6
ATR0820G285 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.1e-21 107.5 163 35.0
ATR0820G152 Amborella trichopoda HOM05D010077 ORTHO05D013698 8.0e-20 101.3 146 35.6
FAN21G2448 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.4e-19 100.5 117 36.8
ATR0820G252 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.8e-19 100.1 132 37.9
ATR0820G089 Amborella trichopoda HOM05D010077 ORTHO05D013698 6.8e-19 98.2 146 36.3
Pp3c11_20540 Physcomitrium patens HOM05D000572 ORTHO05D002399 6.8e-19 98.2 138 30.4
ATR0820G075 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.6e-18 96.3 135 36.3
Actinidia19532 Actinidia chinensis HOM05D000572 ORTHO05D002399 3.4e-18 95.9 116 40.5
ATR0820G299 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.4e-18 95.9 167 32.9
Mapoly0038s0027 Marchantia polymorpha HOM05D000572 ORTHO05D002399 3.7e-17 92.4 124 35.5
ATR0820G099 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.4e-16 90.5 143 34.3
ATR0820G047 Amborella trichopoda HOM05D010077 ORTHO05D013698 7.0e-16 88.2 115 36.5
ATR0820G235 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.0e-15 86.7 135 31.1
ATR0439G001 Amborella trichopoda HOM05D010077 ORTHO05D013698 7.8e-15 84.7 127 35.4
Oeu063107.2 Olea europaea HOM05D000572 ORTHO05D002399 5.0e-14 82.0 66 53.0
ATR0820G260 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.5e-13 79.7 149 32.2
Psat0s3408g0040 Pisum sativum HOM05D000572 ORTHO05D002399 1.2e-10 70.9 91 37.4
VMungo0464G0463 Vigna mungo HOM05D000572 ORTHO05D002399 6.4e-09 65.1 81 44.4
CARHR058400 Cardamine hirsuta HOM05D000572 ORTHO05D002399 9.2e-08 61.2 95 36.8
Psat4g163840 Pisum sativum HOM05D000572 ORTHO05D002399 2.7e-07 59.7 66 37.9
Psat2g046640 Pisum sativum HOM05D000572 ORTHO05D002399 3.5e-07 59.3 66 37.9


User provided reference genes

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