Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50978 Chara braunii HOM05D005639 ORTHO05D007234 7.7e-253 877.1 595 100.0
Mapoly0012s0170 Marchantia polymorpha HOM05D005639 ORTHO05D007234 8.9e-92 342.0 550 45.6
Pp3c15_1000 Physcomitrium patens HOM05D005639 ORTHO05D007234 6.0e-88 329.3 527 45.2
AagrBONN_evm.TU.Sc2ySwM_228.3905 Anthoceros agrestis HOM05D005639 ORTHO05D007234 1.0e-87 328.6 474 48.3
Sed0017304 Sechium edule HOM05D005639 ORTHO05D007234 5.1e-87 326.2 522 42.3
Nn5g27628 Nelumbo nucifera HOM05D005639 ORTHO05D007234 6.6e-87 325.9 557 44.0
Pp3c13_22280 Physcomitrium patens HOM05D005639 ORTHO05D007234 1.9e-86 324.3 527 44.4
Haze_19855 Corylus avellana HOM05D005639 ORTHO05D007234 7.3e-86 322.4 567 42.9
HPP92_013994 Vanilla planifolia HOM05D005639 ORTHO05D007234 7.3e-86 322.4 552 41.5
GSVIVG01021618001 Vitis vinifera HOM05D005639 ORTHO05D007234 1.6e-85 321.2 533 42.4
Cfa016817 Carpinus fangiana HOM05D005639 ORTHO05D007234 2.1e-85 320.9 553 43.0
PSO675G8746 Papaver somniferum HOM05D005639 ORTHO05D007234 2.1e-85 320.9 530 44.7
Ciclev10014949m.g Citrus clementina HOM05D005639 ORTHO05D007234 3.6e-85 320.1 521 44.3
ClCG08G001610 Citrullus lanatus HOM05D005639 ORTHO05D007234 1.8e-84 317.8 523 45.7
MSTRG.13266 Avicennia marina HOM05D005639 ORTHO05D007234 5.2e-84 316.2 553 43.9
Dinv03058 Davidia involucrata HOM05D005639 ORTHO05D007234 1.2e-83 315.1 550 43.3
Aqoxy1G01607 Aquilegia oxysepala HOM05D005639 ORTHO05D007234 1.5e-83 314.7 467 46.5
Migut.H01334 Erythranthe guttata HOM05D005639 ORTHO05D007234 1.5e-83 314.7 471 47.1
Sed0027243 Sechium edule HOM05D005639 ORTHO05D007234 2.6e-83 313.9 550 44.0
Atru.chr10.888 Acer truncatum HOM05D005639 ORTHO05D007234 5.8e-83 312.8 548 42.7
CSS0044875 Camellia sinensis var. sinensis HOM05D005639 ORTHO05D007234 5.8e-83 312.8 518 45.2
PSO541G1457 Papaver somniferum HOM05D005639 ORTHO05D007234 5.8e-83 312.8 524 44.8
Eucgr.D00190 Eucalyptus grandis HOM05D005639 ORTHO05D007234 9.9e-83 312.0 521 45.1
Prupe.4G089600 Prunus persica HOM05D005639 ORTHO05D007234 1.3e-82 311.6 554 43.7
DCAR_003859 Daucus carota HOM05D005639 ORTHO05D007234 1.7e-82 311.2 556 40.8
CsaV3_5G039540 Cucumis sativus L. HOM05D005639 ORTHO05D007234 2.2e-82 310.8 549 43.2
Lsat_1_v5_gn_4_3900 Lactuca sativa HOM05D005639 ORTHO05D007234 2.2e-82 310.8 544 41.4
Ca_00807_v3 Cicer arietinum L. HOM05D005639 ORTHO05D007234 1.1e-81 308.5 467 45.2
HanXRQChr17g0569471 Helianthus annuus HOM05D005639 ORTHO05D007234 1.4e-81 308.1 524 42.2
CiPaw.04G138400 Carya illinoinensis HOM05D005639 ORTHO05D007234 1.9e-81 307.8 555 42.0
ATR0165G031 Amborella trichopoda HOM05D005639 ORTHO05D007234 2.4e-81 307.4 521 44.7
Lalb_Chr18g0057911 Lupinus albus HOM05D005639 ORTHO05D007234 2.4e-81 307.4 467 44.8
Sc24g0001380 Simmondsia chinensis HOM05D005639 ORTHO05D007234 3.2e-81 307.0 469 45.6
Hma1.2p1_0333F.1_g128320 Hydrangea macrophylla HOM05D005639 ORTHO05D007234 5.4e-81 306.2 471 45.6
Cc09_g08220 Coffea canephora HOM05D005639 ORTHO05D007234 9.3e-81 305.4 467 45.8
Dinv01990 Davidia involucrata HOM05D005639 ORTHO05D007234 1.2e-80 305.1 536 44.6
VMungo0540G0794 Vigna mungo HOM05D005639 ORTHO05D007234 4.6e-80 303.1 467 43.9
MD10G1254000 Malus domestica HOM05D005639 ORTHO05D007234 1.3e-79 301.6 539 42.5
Peaxi162Scf00670g00332 Petunia axillaris HOM05D005639 ORTHO05D007234 1.7e-79 301.2 468 43.2
Hund22392 Selenicereus undatus HOM05D005639 ORTHO05D007234 1.7e-79 301.2 474 44.9
SGA_v2.0_scaffold106G30666 Striga asiatica HOM05D005639 ORTHO05D007234 2.3e-79 300.8 471 45.2
Sabra05G0051400 Salix brachista HOM05D005639 ORTHO05D007234 3.9e-79 300.1 521 41.1
TWI09G1293 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 3.9e-79 300.1 539 42.7
MD05G1274300 Malus domestica HOM05D005639 ORTHO05D007234 6.6e-79 299.3 524 42.0
TWI73G0023 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 6.6e-79 299.3 550 41.8
Glyma.09G023100 Glycine max HOM05D005639 ORTHO05D007234 8.7e-79 298.9 467 42.8
Nitab4.5_0004077g0020 Nicotiana tabacum HOM05D005639 ORTHO05D007234 8.7e-79 298.9 467 43.5
Actinidia36001 Actinidia chinensis HOM05D005639 ORTHO05D007234 1.5e-78 298.1 519 44.1
arahy.Tifrunner.gnm1.ann1.JS3IU7 Arachis hypogaea HOM05D005639 ORTHO05D007234 2.5e-78 297.4 460 43.9
Potri.005G061000 Populus trichocarpa HOM05D005639 ORTHO05D007234 2.5e-78 297.4 520 42.1
Nitab4.5_0002719g0080 Nicotiana tabacum HOM05D005639 ORTHO05D007234 5.6e-78 296.2 468 42.9
FAN21G2832 Fragaria x ananassa HOM05D005639 ORTHO05D007234 7.3e-78 295.8 527 44.0
TAR626G0701 Trochodendron aralioides HOM05D005639 ORTHO05D007234 7.3e-78 295.8 445 45.2
Ah.14g085710 Amaranthus hybridus HOM05D005639 ORTHO05D007234 9.6e-78 295.4 472 44.1
Psat1g168120 Pisum sativum HOM05D005639 ORTHO05D007234 9.6e-78 295.4 559 41.1
PGR083G2688 Punica granatum HOM05D005639 ORTHO05D007234 1.3e-77 295.0 522 42.0
Lj6g0009484 Lotus japonicus HOM05D005639 ORTHO05D007234 1.6e-77 294.7 541 44.0
THA.LOC104812393 Tarenaya hassleriana HOM05D005639 ORTHO05D007234 1.6e-77 294.7 527 40.8
FvH4_3g09990 Fragaria vesca HOM05D005639 ORTHO05D007234 2.8e-77 293.9 557 41.8
ECA234G3170 Erigeron canadensis HOM05D005639 ORTHO05D007234 3.6e-77 293.5 523 43.6
Medtr2g029940 Medicago truncatula HOM05D005639 ORTHO05D007234 3.6e-77 293.5 469 43.7
THA.LOC104806253 Tarenaya hassleriana HOM05D005639 ORTHO05D007234 3.6e-77 293.5 523 40.7
RcHm_v2.0_Chr5g0015871 Rosa chinensis HOM05D005639 ORTHO05D007234 4.8e-77 293.1 527 43.8
Cpa.g.sc19.212 Carica papaya HOM05D005639 ORTHO05D007234 6.2e-77 292.7 562 39.7
Phvul.006G129100 Phaseolus vulgaris HOM05D005639 ORTHO05D007234 6.2e-77 292.7 553 42.1
Potri.007G107900 Populus trichocarpa HOM05D005639 ORTHO05D007234 6.2e-77 292.7 523 42.4
FAN25G3670 Fragaria x ananassa HOM05D005639 ORTHO05D007234 1.8e-76 291.2 554 42.6
Thecc.06G000900 Theobroma cacao HOM05D005639 ORTHO05D007234 2.4e-76 290.8 533 40.7
Sabra07G0088400 Salix brachista HOM05D005639 ORTHO05D007234 4.0e-76 290.0 521 43.2
CDE05G0927 Ceratophyllum demersum HOM05D005639 ORTHO05D007234 6.9e-76 289.3 552 40.4
vmacro03396 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 6.9e-76 289.3 472 44.9
Rhsim13G0120200 Rhododendron simsii HOM05D005639 ORTHO05D007234 1.2e-75 288.5 472 43.9
FAN16G1271 Fragaria x ananassa HOM05D005639 ORTHO05D007234 2.6e-75 287.3 534 38.6
MELO3C022131.2 Cucumis melo HOM05D005639 ORTHO05D007234 5.8e-75 286.2 499 42.3
PGSC0003DMG402021193 Solanum tuberosum HOM05D005639 ORTHO05D007234 3.8e-74 283.5 467 42.2
Manes.13G081200 Manihot esculenta HOM05D005639 ORTHO05D007234 4.9e-74 283.1 554 44.2
COL.COLO4_26825 Corchorus olitorius HOM05D005639 ORTHO05D007234 8.4e-74 282.3 540 40.4
SalBow7G3138 Salvia bowleyana HOM05D005639 ORTHO05D007234 1.4e-73 281.6 564 42.2
Zm00001eb050650 Zea mays HOM05D005639 ORTHO05D007234 1.4e-73 281.6 463 43.0
Solyc02g069770.3 Solanum lycopersicum HOM05D005639 ORTHO05D007234 1.9e-73 281.2 467 42.4
Sopen02g018930 Solanum pennellii HOM05D005639 ORTHO05D007234 1.9e-73 281.2 467 42.2
Zm00001eb218720 Zea mays HOM05D005639 ORTHO05D007234 2.4e-73 280.8 556 39.4
CARHR252170 Cardamine hirsuta HOM05D005639 ORTHO05D007234 9.3e-73 278.9 537 41.3
Carub.0006s3332 Capsella rubella HOM05D005639 ORTHO05D007234 2.1e-72 277.7 542 37.6
arahy.Tifrunner.gnm1.ann1.MSHM5J Arachis hypogaea HOM05D005639 ORTHO05D007234 6.0e-72 276.2 507 39.6
unitig_8.g4887 Utricularia gibba HOM05D005639 ORTHO05D007234 6.0e-72 276.2 539 39.5
AL6G49000 Arabidopsis lyrata HOM05D005639 ORTHO05D007234 1.3e-71 275.0 420 43.1
Os03g0625900 Oryza sativa ssp. japonica HOM05D005639 ORTHO05D007234 2.3e-71 274.2 419 44.9
AT4G05410 Arabidopsis thaliana HOM05D005639 ORTHO05D007234 5.1e-71 273.1 454 42.7
EL10Ac4g08968 Beta vulgaris HOM05D005639 ORTHO05D007234 2.5e-70 270.8 443 43.3
Oeu030450.1 Olea europaea HOM05D005639 ORTHO05D007234 5.6e-70 269.6 567 33.7
Thhalv10028589m.g Eutrema salsugineum HOM05D005639 ORTHO05D007234 1.3e-69 268.5 533 39.4
Gohir.A02G094000 Gossypium hirsutum HOM05D005639 ORTHO05D007234 1.3e-69 268.5 561 38.9
AT4G21130 Arabidopsis thaliana HOM05D005639 ORTHO05D007234 2.1e-69 267.7 548 33.2
Aa31LG9G9170 Aethionema arabicum HOM05D005639 ORTHO05D007234 2.8e-69 267.3 520 42.7
Sp6g03680 Schrenkiella parvula HOM05D005639 ORTHO05D007234 8.1e-69 265.8 552 42.4
QL03p009300 Quercus lobata HOM05D005639 ORTHO05D007234 2.4e-68 264.2 623 32.9
AUR62033065 Chenopodium quinoa HOM05D005639 ORTHO05D007234 4.0e-68 263.5 481 38.3
Gorai.005G118400 Gossypium raimondii HOM05D005639 ORTHO05D007234 4.0e-68 263.5 550 38.9
Gohir.D02G104300 Gossypium hirsutum HOM05D005639 ORTHO05D007234 1.2e-67 261.9 550 38.7
SMO146G0033 Selaginella moellendorffii HOM05D005639 ORTHO05D007234 1.5e-67 261.5 510 40.6
CiPaw.02G032400 Carya illinoinensis HOM05D005639 ORTHO05D007234 2.0e-67 261.2 525 35.0
MCO15G200 Micromonas commoda HOM05D005639 ORTHO05D007234 2.0e-67 261.2 537 34.3
BraA03t12214Z Brassica rapa HOM05D005639 ORTHO05D007234 4.5e-67 260.0 452 41.2
A09p25350 Brassica napus HOM05D005639 ORTHO05D007234 7.6e-67 259.2 452 41.2
BolC3t15973H Brassica oleracea HOM05D005639 ORTHO05D007234 7.6e-67 259.2 452 40.9
BcaB01g02559 Brassica carinata HOM05D005639 ORTHO05D007234 9.9e-67 258.8 541 42.0
C03p36580 Brassica napus HOM05D005639 ORTHO05D007234 9.9e-67 258.8 452 41.2
BcaC01g06663 Brassica carinata HOM05D005639 ORTHO05D007234 1.3e-66 258.5 452 40.9
FAN11G3706 Fragaria x ananassa HOM05D005639 ORTHO05D007234 2.9e-66 257.3 568 35.9
A03p30310 Brassica napus HOM05D005639 ORTHO05D007234 3.8e-66 256.9 452 40.9
C09p32350 Brassica napus HOM05D005639 ORTHO05D007234 3.8e-66 256.9 552 38.0
BolC9t56080H Brassica oleracea HOM05D005639 ORTHO05D007234 3.8e-66 256.9 555 37.3
AL7G32990 Arabidopsis lyrata HOM05D005639 ORTHO05D007234 6.4e-66 256.1 472 35.8
BraA09t38117Z Brassica rapa HOM05D005639 ORTHO05D007234 8.4e-66 255.8 555 38.6
CiPaw.10G033400 Carya illinoinensis HOM05D005639 ORTHO05D007234 7.9e-64 249.2 537 32.8
PRCOL_00004480 Prasinoderma coloniale HOM05D005639 ORTHO05D007234 2.8e-61 240.7 548 36.7
HanXRQChr13g0407861 Helianthus annuus HOM05D005639 ORTHO05D007234 1.1e-52 212.2 412 39.1
AUR62042204 Chenopodium quinoa HOM05D005639 ORTHO05D007234 2.4e-52 211.1 479 35.1
Cre06.g278175 Chlamydomonas reinhardtii HOM05D005639 ORTHO05D007234 5.7e-46 189.9 520 30.8
Glyma.15G129100 Glycine max HOM05D005639 ORTHO05D007234 9.7e-46 189.1 322 34.5
vmacro03440 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 3.7e-45 187.2 450 32.7
Actinidia13478 Actinidia chinensis HOM05D005639 ORTHO05D007234 1.9e-33 148.3 250 37.2
Actinidia13477 Actinidia chinensis HOM05D005639 ORTHO05D007234 4.2e-25 120.6 258 38.0
Cfa027057 Carpinus fangiana HOM05D005639 ORTHO05D007234 2.7e-24 117.9 634 23.5
C06p38580 Brassica napus HOM05D005639 ORTHO05D007234 3.7e-21 107.5 330 27.0
BolC6t38950H Brassica oleracea HOM05D005639 ORTHO05D007234 6.3e-21 106.7 296 27.4
Duzib235G0447 Durio zibethinus HOM05D005639 ORTHO05D007234 3.1e-20 104.4 200 34.0
BcaB01g02186 Brassica carinata HOM05D005639 ORTHO05D007234 2.4e-12 78.2 143 33.6
BcaC04g22046 Brassica carinata HOM05D001874 ORTHO05D002166 1.3e-10 72.4 82 41.5
BcaB07g31331 Brassica carinata HOM05D005639 ORTHO05D007234 1.9e-09 68.6 110 36.4
A08p03340 Brassica napus HOM05D005639 ORTHO05D001462 1.6e-08 65.5 94 37.2
Cfa023113 Carpinus fangiana HOM05D005323 ORTHO05D017328 9.8e-06 56.2 115 29.6


User provided reference genes

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