Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g38452 Chara braunii HOM05D001061 ORTHO05D006729 0.0e+00 1357.0 743 100.0
Ah.07g207270 Amaranthus hybridus HOM05D001061 ORTHO05D006729 1.8e-70 271.6 279 56.3
Pp3c2_16220 Physcomitrium patens HOM05D001061 ORTHO05D006729 2.4e-70 271.2 281 56.6
Pp3c2_16228 Physcomitrium patens HOM05D001061 ORTHO05D006729 2.4e-70 271.2 281 56.6
Cc02_g03080 Coffea canephora HOM05D001061 ORTHO05D006729 2.7e-69 267.7 246 59.3
Lj5g0016766 Lotus japonicus HOM05D001061 ORTHO05D006729 3.5e-69 267.3 280 53.2
Nn1g01435 Nelumbo nucifera HOM05D001061 ORTHO05D006729 3.5e-69 267.3 246 60.2
Aqoxy7G00378 Aquilegia oxysepala HOM05D001061 ORTHO05D006729 1.7e-68 265.0 246 58.1
PGR142G2564 Punica granatum HOM05D001061 ORTHO05D006729 3.9e-68 263.8 251 57.8
Rhsim03G0180100 Rhododendron simsii HOM05D001061 ORTHO05D006729 5.0e-68 263.5 253 56.1
ATR0680G072 Amborella trichopoda HOM05D001061 ORTHO05D006729 6.6e-68 263.1 245 59.2
vmacro06688 Vaccinium macrocarpon HOM05D001061 ORTHO05D006729 8.6e-68 262.7 258 56.2
Hund11753 Selenicereus undatus HOM05D001061 ORTHO05D006729 1.9e-67 261.5 246 57.7
Ciclev10004302m.g Citrus clementina HOM05D001061 ORTHO05D006729 3.3e-67 260.8 245 59.6
EL10Ac3g05663 Beta vulgaris HOM05D001061 ORTHO05D006729 5.6e-67 260.0 245 59.2
Mapoly0043s0063 Marchantia polymorpha HOM05D001061 ORTHO05D006729 5.6e-67 260.0 249 57.8
SEGI_11976 Sequoiadendron giganteum HOM05D001061 ORTHO05D006729 5.6e-67 260.0 245 60.4
SalBow4G2537 Salvia bowleyana HOM05D001061 ORTHO05D006729 7.3e-67 259.6 248 56.0
arahy.Tifrunner.gnm1.ann1.U4UA85 Arachis hypogaea HOM05D001061 ORTHO05D006729 1.2e-66 258.8 245 58.0
AUR62015994 Chenopodium quinoa HOM05D001061 ORTHO05D006729 1.2e-66 258.8 246 58.1
Migut.F00349 Erythranthe guttata HOM05D001061 ORTHO05D006729 1.2e-66 258.8 246 56.5
Dinv28450 Davidia involucrata HOM05D001061 ORTHO05D006729 1.6e-66 258.5 250 57.2
Oeu022585.1 Olea europaea HOM05D001061 ORTHO05D006729 1.6e-66 258.5 246 56.5
Sed0018541 Sechium edule HOM05D001061 ORTHO05D006729 1.6e-66 258.5 252 55.6
AUR62021201 Chenopodium quinoa HOM05D001061 ORTHO05D006729 2.1e-66 258.1 246 58.1
Nitab4.5_0003365g0010 Nicotiana tabacum HOM05D001061 ORTHO05D006729 2.1e-66 258.1 246 55.7
arahy.Tifrunner.gnm1.ann1.353VBZ Arachis hypogaea HOM05D001061 ORTHO05D006729 2.8e-66 257.7 245 57.6
VMungo0720G3063 Vigna mungo HOM05D001061 ORTHO05D006729 2.8e-66 257.7 246 56.5
GSVIVG01006611001 Vitis vinifera HOM05D001061 ORTHO05D006729 2.8e-66 257.7 245 58.4
Actinidia34106 Actinidia chinensis HOM05D001061 ORTHO05D006729 6.2e-66 256.5 252 56.3
CSS0048539 Camellia sinensis var. sinensis HOM05D001061 ORTHO05D006729 6.2e-66 256.5 252 56.0
Hma1.2p1_3335F.1_g335330 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 8.0e-66 256.1 246 56.5
DCAR_009363 Daucus carota HOM05D001061 ORTHO05D006729 1.1e-65 255.8 245 57.1
Medtr1g100683 Medicago truncatula HOM05D001061 ORTHO05D006729 1.1e-65 255.8 245 55.9
SGA_v2.0_scaffold44G16715 Striga asiatica HOM05D001061 ORTHO05D006729 1.1e-65 255.8 246 55.3
CAN.G913.1 Capsicum annuum HOM05D001061 ORTHO05D006729 1.4e-65 255.4 246 55.7
Haze_13724 Corylus avellana HOM05D001061 ORTHO05D006729 1.4e-65 255.4 245 56.7
Prupe.2G293300 Prunus persica HOM05D001061 ORTHO05D006729 1.4e-65 255.4 252 55.2
RcHm_v2.0_Chr1g0377121 Rosa chinensis HOM05D001061 ORTHO05D006729 1.4e-65 255.4 246 57.3
Duzib205G0347 Durio zibethinus HOM05D001061 ORTHO05D006729 1.8e-65 255.0 248 56.5
Glyma.20G157600 Glycine max HOM05D001061 ORTHO05D006729 1.8e-65 255.0 246 56.9
Cfa008311 Carpinus fangiana HOM05D001061 ORTHO05D006729 2.3e-65 254.6 245 56.7
Ca_10778_v3 Cicer arietinum L. HOM05D001061 ORTHO05D006729 2.3e-65 254.6 245 57.1
Hma1.2p1_2482F.1_g322970 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 2.3e-65 254.6 245 56.7
Hma1.2p1_2482F.1_g322980 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 2.3e-65 254.6 245 56.7
SMO116G0252 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 2.3e-65 254.6 243 58.8
Lalb_Chr06g0161081 Lupinus albus HOM05D001061 ORTHO05D006729 3.1e-65 254.2 245 58.0
Peaxi162Scf01452g00006 Petunia axillaris HOM05D001061 ORTHO05D006729 3.1e-65 254.2 246 56.5
Sopen03g004700 Solanum pennellii HOM05D001061 ORTHO05D006729 3.1e-65 254.2 249 55.8
GSVIVG01007141001 Vitis vinifera HOM05D001061 ORTHO05D006729 3.1e-65 254.2 245 57.6
PSO675G8279 Papaver somniferum HOM05D001061 ORTHO05D006729 4.0e-65 253.8 253 56.1
Lsat_1_v5_gn_8_8260 Lactuca sativa HOM05D001061 ORTHO05D006729 6.8e-65 253.1 277 52.3
MD07G1267600 Malus domestica HOM05D001061 ORTHO05D006729 6.8e-65 253.1 252 55.6
TWI23G0875 Tripterygium wilfordii HOM05D001061 ORTHO05D006729 6.8e-65 253.1 245 56.3
CANSAT21G0044 Cannabis sativa HOM05D001061 ORTHO05D006729 8.9e-65 252.7 277 51.6
FvH4_7g29360 Fragaria vesca HOM05D001061 ORTHO05D006729 1.2e-64 252.3 246 57.3
Potri.015G142900 Populus trichocarpa HOM05D001061 ORTHO05D006729 1.2e-64 252.3 252 56.0
Gohir.A12G258300 Gossypium hirsutum HOM05D001061 ORTHO05D006729 1.5e-64 251.9 245 55.9
Solyc03g025890.2 Solanum lycopersicum HOM05D001061 ORTHO05D006729 1.5e-64 251.9 249 54.2
CsaV3_3G017020 Cucumis sativus L. HOM05D001061 ORTHO05D006729 2.0e-64 251.5 270 52.6
Thecc.03G175500 Theobroma cacao HOM05D001061 ORTHO05D006729 2.0e-64 251.5 251 55.0
ECA233G1964 Erigeron canadensis HOM05D001061 ORTHO05D009717 2.6e-64 251.1 277 50.9
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 3.4e-64 250.8 245 56.7
Phvul.007G069100 Phaseolus vulgaris HOM05D001061 ORTHO05D006729 4.4e-64 250.4 244 58.2
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 4.4e-64 250.4 252 56.0
AT4G25540 Arabidopsis thaliana HOM05D001061 ORTHO05D006729 5.8e-64 250.0 245 55.5
HPP92_020859 Vanilla planifolia HOM05D001061 ORTHO05D006729 5.8e-64 250.0 246 56.5
MELO3C006901.2 Cucumis melo HOM05D001061 ORTHO05D006729 7.5e-64 249.6 271 52.4
FAN03G0437 Fragaria x ananassa HOM05D001061 ORTHO05D006729 7.5e-64 249.6 246 56.5
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 7.5e-64 249.6 246 56.5
FAN10G0894 Fragaria x ananassa HOM05D001061 ORTHO05D006729 7.5e-64 249.6 246 56.5
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 9.8e-64 249.2 246 56.9
C07p54390 Brassica napus HOM05D001061 ORTHO05D006729 1.3e-63 248.8 245 55.9
CARHR232960 Cardamine hirsuta HOM05D001061 ORTHO05D006729 1.3e-63 248.8 245 55.5
CiPaw.03G105500 Carya illinoinensis HOM05D001061 ORTHO05D006729 1.7e-63 248.4 245 56.7
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 1.7e-63 248.4 246 56.1
Sp7g23570 Schrenkiella parvula HOM05D001061 ORTHO05D006729 1.7e-63 248.4 245 55.9
Carub.0007s1544 Capsella rubella HOM05D001061 ORTHO05D006729 2.2e-63 248.1 247 55.1
AL7G27560 Arabidopsis lyrata HOM05D001061 ORTHO05D006729 2.9e-63 247.7 245 54.3
BolC7t45925H Brassica oleracea HOM05D001061 ORTHO05D006729 2.9e-63 247.7 245 55.5
A03p56070 Brassica napus HOM05D001061 ORTHO05D006729 4.9e-63 246.9 245 55.9
BraA03t14678Z Brassica rapa HOM05D001061 ORTHO05D006729 4.9e-63 246.9 245 55.9
Lj1A996G55 Lonicera japonica HOM05D001061 ORTHO05D006729 6.4e-63 246.5 241 58.1
TPR.G14341 Trifolium pratense HOM05D001061 ORTHO05D006729 8.3e-63 246.1 253 53.4
Thhalv10024274m.g Eutrema salsugineum HOM05D001061 ORTHO05D006729 1.1e-62 245.7 245 55.9
Manes.14G026600 Manihot esculenta HOM05D001061 ORTHO05D006729 1.1e-62 245.7 253 56.1
ClCG05G007980 Citrullus lanatus HOM05D001061 ORTHO05D006729 1.9e-62 245.0 254 53.5
Aa31sc165G10 Aethionema arabicum HOM05D001061 ORTHO05D006729 4.1e-62 243.8 245 54.7
Sc25g0000470 Simmondsia chinensis HOM05D001061 ORTHO05D006729 4.1e-62 243.8 243 56.0
Gohir.D12G259600 Gossypium hirsutum HOM05D001061 ORTHO05D006729 9.2e-62 242.7 245 54.7
Gorai.008G278000 Gossypium raimondii HOM05D001061 ORTHO05D006729 9.2e-62 242.7 245 54.7
QL09p014380 Quercus lobata HOM05D001061 ORTHO05D006729 1.2e-61 242.3 245 54.7
HanXRQChr05g0141231 Helianthus annuus HOM05D001061 ORTHO05D006729 4.6e-61 240.4 260 51.5
Atru.chr1.472 Acer truncatum HOM05D001061 ORTHO05D006729 1.0e-60 239.2 244 54.1
MBI18_g09768_MAGBIO Magnolia biondii HOM05D001061 ORTHO05D006729 1.3e-60 238.8 251 54.6
THA.LOC104811986 Tarenaya hassleriana HOM05D001061 ORTHO05D006729 5.0e-60 236.9 280 49.6
Nitab4.5_0000716g0140 Nicotiana tabacum HOM05D001061 ORTHO05D006729 1.5e-59 235.3 219 57.5
CDE11G1074 Ceratophyllum demersum HOM05D001061 ORTHO05D006729 3.3e-59 234.2 248 54.0
unitig_46.g18782 Utricularia gibba HOM05D001061 ORTHO05D006729 2.1e-58 231.5 245 51.8
SHI13790 Sapria himalayana HOM05D001061 ORTHO05D006729 1.1e-57 229.2 254 52.0
Psat6g199840 Pisum sativum HOM05D001061 ORTHO05D006729 5.2e-57 226.9 224 55.4
GSVIVG01010538001 Vitis vinifera HOM05D001061 ORTHO05D006729 1.7e-55 221.9 224 56.2
Os04g0682900 Oryza sativa ssp. japonica HOM05D001061 ORTHO05D006729 1.4e-54 218.8 254 52.0
BcaC06g32803 Brassica carinata HOM05D001061 ORTHO05D006729 2.1e-53 214.9 231 51.5
Eucgr.K00248 Eucalyptus grandis HOM05D001061 ORTHO05D006729 3.5e-53 214.2 224 54.9
Zm00001eb434000 Zea mays HOM05D001061 ORTHO05D006729 3.9e-52 210.7 250 51.6
MCO07G196 Micromonas commoda HOM05D001061 ORTHO05D006729 2.6e-40 171.4 265 40.8
Eucgr.L01884 Eucalyptus grandis HOM05D001061 ORTHO05D006729 1.2e-37 162.5 197 49.7
Cfa027083 Carpinus fangiana HOM05D001061 ORTHO05D006729 2.7e-37 161.4 294 37.4
PRCOL_00004183 Prasinoderma coloniale HOM05D001061 ORTHO05D006729 1.6e-34 152.1 258 39.5
Psat4g089160 Pisum sativum HOM05D001061 ORTHO05D006729 4.0e-33 147.5 224 42.0
MELO3C029137.2 Cucumis melo HOM05D001061 ORTHO05D006729 2.5e-14 85.1 76 61.8
TAR636G0015 Trochodendron aralioides HOM05D001061 ORTHO05D006729 7.7e-08 63.5 117 35.9
SMO047G0001 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 1.0e-07 63.2 53 60.4
SMO195G0034 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 1.0e-07 63.2 53 60.4
SMO195G0050 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 1.0e-07 63.2 53 60.4
SMO195G0022 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 1.3e-07 62.8 53 60.4
SMO195G0039 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 2.9e-07 61.6 53 58.5
Cpa.g.sc107.43 Carica papaya HOM05D001061 ORTHO05D006729 6.5e-07 60.5 52 51.9
SMO195G0055 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 2.5e-06 58.5 49 61.2


User provided reference genes

Program Settings