Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20017 Chara braunii HOM05D005707 ORTHO05D007276 0.0e+00 1680.6 848 100.0
Mapoly0022s0120 Marchantia polymorpha HOM05D005707 ORTHO05D007276 7.1e-244 847.8 799 55.9
AagrBONN_evm.TU.Sc2ySwM_344.1573 Anthoceros agrestis HOM05D005707 ORTHO05D007276 1.3e-240 837.0 778 56.4
COL.COLO4_09234 Corchorus olitorius HOM05D005707 ORTHO05D007276 9.0e-231 804.3 949 46.4
Eucgr.A01050 Eucalyptus grandis HOM05D005707 ORTHO05D007276 9.0e-231 804.3 757 53.9
PGR142G3494 Punica granatum HOM05D005707 ORTHO05D007276 8.5e-229 797.7 780 53.7
SEGI_38374 Sequoiadendron giganteum HOM05D005707 ORTHO05D007276 3.2e-228 795.8 994 44.5
Sabra14G0126000 Salix brachista HOM05D005707 ORTHO05D007276 9.4e-228 794.3 764 53.4
Gohir.A11G149550 Gossypium hirsutum HOM05D005707 ORTHO05D007276 1.2e-227 793.9 757 53.5
Gorai.007G166700 Gossypium raimondii HOM05D005707 ORTHO05D007276 2.1e-227 793.1 757 53.4
Gohir.D11G156360 Gossypium hirsutum HOM05D005707 ORTHO05D007276 2.7e-227 792.7 757 53.4
vmacro12103 Vaccinium macrocarpon HOM05D005707 ORTHO05D007276 2.7e-227 792.7 982 44.6
Hma1.2p1_1267F.1_g271460 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 4.6e-227 792.0 756 54.8
QL06p053011 Quercus lobata HOM05D005707 ORTHO05D007276 4.6e-227 792.0 763 53.7
Haze_03608 Corylus avellana HOM05D005707 ORTHO05D007276 1.0e-226 790.8 767 52.5
Manes.13G062700 Manihot esculenta HOM05D005707 ORTHO05D007276 1.0e-226 790.8 771 52.8
MD09G1123500 Malus domestica HOM05D005707 ORTHO05D007276 1.8e-226 790.0 747 54.1
Potri.014G165400 Populus trichocarpa HOM05D005707 ORTHO05D007276 1.8e-226 790.0 762 53.3
Lj8A134G73 Lonicera japonica HOM05D005707 ORTHO05D007276 2.3e-226 789.6 994 44.1
CiPaw.07G002400 Carya illinoinensis HOM05D005707 ORTHO05D007276 3.0e-226 789.3 765 52.9
Cfa007084 Carpinus fangiana HOM05D005707 ORTHO05D007276 3.9e-226 788.9 751 53.3
MSTRG.14925 Avicennia marina HOM05D005707 ORTHO05D007276 8.8e-226 787.7 762 52.6
MD17G1113900 Malus domestica HOM05D005707 ORTHO05D007276 8.8e-226 787.7 761 53.4
TAR626G1120 Trochodendron aralioides HOM05D005707 ORTHO05D007276 8.8e-226 787.7 757 53.5
Dinv07863 Davidia involucrata HOM05D005707 ORTHO05D007276 5.7e-225 785.0 777 53.0
Lsat_1_v5_gn_0_5460 Lactuca sativa HOM05D005707 ORTHO05D007276 7.4e-225 784.6 752 53.3
Nn1g03422 Nelumbo nucifera HOM05D005707 ORTHO05D007276 1.3e-224 783.9 778 52.4
RcHm_v2.0_Chr2g0156491 Rosa chinensis HOM05D005707 ORTHO05D007276 1.7e-224 783.5 762 52.9
Ciclev10018207m.g Citrus clementina HOM05D005707 ORTHO05D007276 3.7e-224 782.3 758 52.6
FvH4_6g40910 Fragaria vesca HOM05D005707 ORTHO05D007276 4.8e-224 781.9 758 53.0
MBI16_g36319_MAGBIO Magnolia biondii HOM05D005707 ORTHO05D007276 8.2e-224 781.2 748 53.3
Prupe.3G200600 Prunus persica HOM05D005707 ORTHO05D007276 8.2e-224 781.2 764 52.7
Ca_27368_v3 Cicer arietinum L. HOM05D005707 ORTHO05D007276 1.1e-223 780.8 758 53.0
FAN14G2372 Fragaria x ananassa HOM05D005707 ORTHO05D007276 1.1e-223 780.8 758 52.9
Pp3c25_5560 Physcomitrium patens HOM05D005707 ORTHO05D007276 1.1e-223 780.8 824 51.3
FAN05G2777 Fragaria x ananassa HOM05D005707 ORTHO05D007276 1.8e-223 780.0 758 53.0
AL3G42770 Arabidopsis lyrata HOM05D005707 ORTHO05D007276 3.1e-223 779.2 763 52.2
Manes.12G065301 Manihot esculenta HOM05D005707 ORTHO05D007276 4.1e-223 778.9 776 52.2
C07p09820 Brassica napus HOM05D005707 ORTHO05D007276 5.3e-223 778.5 763 52.3
BraA07t28449Z Brassica rapa HOM05D005707 ORTHO05D007276 6.9e-223 778.1 763 52.8
FAN09G4573 Fragaria x ananassa HOM05D005707 ORTHO05D007276 6.9e-223 778.1 758 52.8
arahy.Tifrunner.gnm1.ann1.T3MKLR Arachis hypogaea HOM05D005707 ORTHO05D007276 9.1e-223 777.7 758 52.5
PSO732G0538 Papaver somniferum HOM05D005707 ORTHO05D007276 9.1e-223 777.7 760 54.1
TWI18G1214 Tripterygium wilfordii HOM05D005707 ORTHO05D007276 9.1e-223 777.7 764 52.1
Zm00001eb420950 Zea mays HOM05D005707 ORTHO05D007276 9.1e-223 777.7 757 53.6
A07p06540 Brassica napus HOM05D005707 ORTHO05D007276 1.2e-222 777.3 763 52.4
FAN02G0692 Fragaria x ananassa HOM05D005707 ORTHO05D007276 1.2e-222 777.3 758 52.2
Migut.M00030 Erythranthe guttata HOM05D005707 ORTHO05D007276 1.5e-222 776.9 759 52.2
Duzib138G1526 Durio zibethinus HOM05D005707 ORTHO05D007276 2.0e-222 776.5 747 53.1
Lsat_1_v5_gn_9_90020 Lactuca sativa HOM05D005707 ORTHO05D007276 2.0e-222 776.5 764 52.6
ATR0626G192 Amborella trichopoda HOM05D005707 ORTHO05D007276 2.6e-222 776.2 769 53.4
AUR62025658 Chenopodium quinoa HOM05D005707 ORTHO05D007276 2.6e-222 776.2 767 52.0
TWI75G1501 Tripterygium wilfordii HOM05D005707 ORTHO05D007276 2.6e-222 776.2 754 53.3
Nitab4.5_0000303g0290 Nicotiana tabacum HOM05D005707 ORTHO05D007276 3.4e-222 775.8 765 52.8
Nitab4.5_0001082g0050 Nicotiana tabacum HOM05D005707 ORTHO05D007276 3.4e-222 775.8 765 52.4
Oeu040469.1 Olea europaea HOM05D005707 ORTHO05D007276 3.4e-222 775.8 770 52.1
PGSC0003DMG400026068 Solanum tuberosum HOM05D005707 ORTHO05D007276 4.5e-222 775.4 767 52.0
BcaC06g35905 Brassica carinata HOM05D005707 ORTHO05D007276 5.9e-222 775.0 763 52.2
BolC7t41423H Brassica oleracea HOM05D005707 ORTHO05D007276 5.9e-222 775.0 763 52.2
AUR62001346 Chenopodium quinoa HOM05D005707 ORTHO05D007276 5.9e-222 775.0 766 51.8
Cc07_g12010 Coffea canephora HOM05D005707 ORTHO05D007276 5.9e-222 775.0 753 52.7
Rhsim06G0174400 Rhododendron simsii HOM05D005707 ORTHO05D007276 5.9e-222 775.0 751 53.4
Carub.0003s2668 Capsella rubella HOM05D005707 ORTHO05D007276 1.0e-221 774.2 763 52.0
Os04g0382700 Oryza sativa ssp. japonica HOM05D005707 ORTHO05D007276 1.3e-221 773.9 755 52.8
Atru.BG.42.p Acer truncatum HOM05D005707 ORTHO05D007276 1.7e-221 773.5 743 53.4
CANSAT64G1567 Cannabis sativa HOM05D005707 ORTHO05D007276 1.7e-221 773.5 756 52.5
ECA240G2058 Erigeron canadensis HOM05D005707 ORTHO05D007276 1.7e-221 773.5 747 52.6
Thhalv10002393m.g Eutrema salsugineum HOM05D005707 ORTHO05D007276 1.7e-221 773.5 759 52.2
AT2G05170 Arabidopsis thaliana HOM05D005707 ORTHO05D007276 2.2e-221 773.1 760 52.4
EL10Ac7g18165 Beta vulgaris HOM05D005707 ORTHO05D007276 2.2e-221 773.1 766 51.6
CAN.G308.64 Capsicum annuum HOM05D005707 ORTHO05D007276 2.2e-221 773.1 769 51.9
Sc15g0001000 Simmondsia chinensis HOM05D005707 ORTHO05D007276 2.2e-221 773.1 753 52.5
Hund18608 Selenicereus undatus HOM05D005707 ORTHO05D007276 3.8e-221 772.3 753 52.5
CsaV3_6G009510 Cucumis sativus L. HOM05D005707 ORTHO05D007276 5.0e-221 771.9 767 51.8
CSS0003308 Camellia sinensis var. sinensis HOM05D005707 ORTHO05D007276 6.5e-221 771.5 772 52.3
CSS0049316 Camellia sinensis var. sinensis HOM05D005707 ORTHO05D007276 6.5e-221 771.5 772 52.3
Nn1g03246 Nelumbo nucifera HOM05D005707 ORTHO05D007276 6.5e-221 771.5 772 52.2
PSO675G5925 Papaver somniferum HOM05D005707 ORTHO05D007276 8.5e-221 771.2 768 53.1
MELO3C025972.2 Cucumis melo HOM05D005707 ORTHO05D007276 1.1e-220 770.8 760 51.6
Solyc06g065170.4 Solanum lycopersicum HOM05D005707 ORTHO05D007276 1.1e-220 770.8 769 51.4
Sopen06g023670 Solanum pennellii HOM05D005707 ORTHO05D007276 1.1e-220 770.8 769 51.5
Actinidia09778 Actinidia chinensis HOM05D005707 ORTHO05D007276 1.4e-220 770.4 760 53.0
DCAR_012906 Daucus carota HOM05D005707 ORTHO05D007276 1.4e-220 770.4 743 52.9
Sp3g23690 Schrenkiella parvula HOM05D005707 ORTHO05D007276 1.4e-220 770.4 761 51.8
SpUn0142_0010 Schrenkiella parvula HOM05D005707 ORTHO05D007276 1.4e-220 770.4 761 51.8
SMO329G0026 Selaginella moellendorffii HOM05D005707 ORTHO05D007276 1.4e-220 770.4 743 53.4
BcaB06g26833 Brassica carinata HOM05D005707 ORTHO05D007276 2.5e-220 769.6 758 51.8
Sed0013138 Sechium edule HOM05D005707 ORTHO05D007276 2.5e-220 769.6 749 52.1
Aqoxy2G03044 Aquilegia oxysepala HOM05D005707 ORTHO05D007276 3.2e-220 769.2 760 52.0
Lj1g0027558 Lotus japonicus HOM05D005707 ORTHO05D007276 3.2e-220 769.2 759 52.0
THA.LOC104808851 Tarenaya hassleriana HOM05D005707 ORTHO05D007276 3.2e-220 769.2 775 51.7
ClCG02G009340 Citrullus lanatus HOM05D005707 ORTHO05D007276 5.5e-220 768.5 754 51.9
arahy.Tifrunner.gnm1.ann1.DQM4AF Arachis hypogaea HOM05D005707 ORTHO05D007276 9.4e-220 767.7 777 51.6
CARHR103040 Cardamine hirsuta HOM05D005707 ORTHO05D007276 1.2e-219 767.3 763 52.0
Glyma.07G119500 Glycine max HOM05D005707 ORTHO05D007276 1.2e-219 767.3 787 50.7
Lj6g0020016 Lotus japonicus HOM05D005707 ORTHO05D007276 1.6e-219 766.9 771 51.5
Aa31LG9G17700 Aethionema arabicum HOM05D005707 ORTHO05D007276 2.7e-219 766.1 762 51.6
SGA_v2.0_scaffold73G24514 Striga asiatica HOM05D005707 ORTHO05D007276 6.1e-219 765.0 750 52.0
HanXRQChr03g0075251 Helianthus annuus HOM05D005707 ORTHO05D007276 7.9e-219 764.6 760 52.4
Lalb_Chr01g0023301 Lupinus albus HOM05D005707 ORTHO05D007276 2.3e-218 763.1 758 52.0
Ah.15g094340 Amaranthus hybridus HOM05D005707 ORTHO05D007276 3.0e-218 762.7 762 51.2
Glyma.03G104400 Glycine max HOM05D005707 ORTHO05D007276 3.0e-218 762.7 779 51.1
GSVIVG01030049001 Vitis vinifera HOM05D005707 ORTHO05D007276 3.0e-218 762.7 760 52.5
VMungo0331G1616 Vigna mungo HOM05D005707 ORTHO05D007276 3.9e-218 762.3 775 51.0
Lj1C792T2 Lonicera japonica HOM05D005707 ORTHO05D007276 5.1e-218 761.9 745 52.8
Phvul.010G042100 Phaseolus vulgaris HOM05D005707 ORTHO05D007276 5.1e-218 761.9 785 50.1
Sed0020801 Sechium edule HOM05D005707 ORTHO05D007276 5.1e-218 761.9 760 50.8
Lalb_Chr19g0124221 Lupinus albus HOM05D005707 ORTHO05D007276 1.1e-217 760.8 772 51.4
Medtr1g019500 Medicago truncatula HOM05D005707 ORTHO05D007276 5.7e-217 758.4 768 51.8
TPR.G3804 Trifolium pratense HOM05D005707 ORTHO05D007276 5.7e-217 758.4 758 52.4
Peaxi162Scf00268g00614 Petunia axillaris HOM05D005707 ORTHO05D007276 6.3e-216 755.0 763 51.5
unitig_37.g12597 Utricularia gibba HOM05D005707 ORTHO05D007276 2.3e-210 736.5 751 51.4
Oeu012343.5 Olea europaea HOM05D005707 ORTHO05D007276 1.4e-191 674.1 982 40.9
CDE12G0215 Ceratophyllum demersum HOM05D005707 ORTHO05D007276 2.7e-190 669.8 752 47.7
Thecc.01G191800 Theobroma cacao HOM05D005707 ORTHO05D007276 9.8e-185 651.4 644 53.9
DCAR_028089 Daucus carota HOM05D005707 ORTHO05D007276 3.2e-183 646.4 656 52.1
Psat6g013160 Pisum sativum HOM05D005707 ORTHO05D007276 4.4e-177 625.9 649 52.2
Cpa.g.sc211.13 Carica papaya HOM05D005707 ORTHO05D007276 1.7e-128 464.5 768 36.6
Hma1.2p1_2056F.1_g312820 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 2.7e-126 457.2 467 54.4
Hma1.2p1_1267F.1_g271470 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 1.3e-125 454.9 467 54.4
HPP92_028369 Vanilla planifolia HOM05D005707 ORTHO05D007276 3.8e-112 410.2 476 45.4
PRCOL_00006472 Prasinoderma coloniale HOM05D005707 ORTHO05D007276 1.7e-104 384.8 680 38.1
Cre02.g095074 Chlamydomonas reinhardtii HOM05D005707 ORTHO05D007276 5.5e-103 379.8 1029 29.3
Lsat_1_v5_gn_9_104540 Lactuca sativa HOM05D005707 ORTHO05D007276 9.8e-76 289.3 226 63.3
Nn6g32392 Nelumbo nucifera HOM05D005707 ORTHO05D007276 1.4e-42 179.1 210 43.8
HPP92_014038 Vanilla planifolia HOM05D005707 ORTHO05D007276 2.8e-38 164.9 182 45.6
Nn6g32391 Nelumbo nucifera HOM05D005707 ORTHO05D007276 1.3e-30 139.4 120 53.3
HPP92_014037 Vanilla planifolia HOM05D005707 ORTHO05D048631 2.4e-29 135.2 140 54.3
Peaxi162Scf00585g00082 Petunia axillaris HOM05D000636 ORTHO05D002338 7.6e-28 130.2 121 47.9
HPP92_028368 Vanilla planifolia HOM05D005707 ORTHO05D007276 7.1e-18 97.1 74 58.1
Nn2g13354 Nelumbo nucifera HOM05D005707 ORTHO05D007276 1.2e-17 96.3 64 60.9
SEGI_06176 Sequoiadendron giganteum HOM05D005707 ORTHO05D007276 2.6e-12 78.6 85 50.6
HPP92_014036 Vanilla planifolia HOM05D005707 ORTHO05D007276 7.6e-12 77.0 51 58.8
VMungo0331G0660 Vigna mungo HOM05D000100 ORTHO05D000052 2.1e-09 68.9 84 46.4
Lalb_Chr01g0023291 Lupinus albus HOM05D005707 ORTHO05D007276 6.3e-06 57.4 78 35.9


User provided reference genes

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